prot_P-wetherbeei_contig5941.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5941.1.1
Unique Nameprot_P-wetherbeei_contig5941.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length103
Homology
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A6H5KZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ63_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 3.650e-36
Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 0
Query:    1 ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 103
            AN+ A +P GC+T+FVKNLPY+ + E AV+ A A CGR++SVRLA+WNHT KLKGFGYV+F  ERGAE  VR Q S+ +GGRPL+VD++  G PKGSFR  DG
Sbjct:  215 ANRKAEQPAGCRTVFVKNLPYD-VEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSIGGRPLVVDFET-GAPKGSFRRQDG 315          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: D7FP47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP47_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.290e-35
Identity = 64/103 (62.14%), Postives = 81/103 (78.64%), Query Frame = 0
Query:    1 ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 103
            AN+ A +P GC+T+FVKNLPY+ + E AV+ A A CGR++SVRLA+WNHT KLKGFGYV+F  ERGAE  VR Q ++ +GGRPL+VD++  G PKGSFR  DG
Sbjct:  227 ANRKAEQPTGCRTVFVKNLPYD-VDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFET-GAPKGSFRRQDG 327          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A836CEI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 9.610e-31
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:    4 SAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 103
            +APRP GC+T+FVKNLPY+   E+ V  AF+ CG V+ VRLA+WN+T + KGFGYV F DE GA+AAV  QA+I + GRP+LVDY+ VG  KGSFR  DG
Sbjct:  319 AAPRPKGCRTVFVKNLPYDA-DEQMVTKAFSKCGEVAIVRLAIWNNTKQRKGFGYVDFADETGAQAAVERQANIKVAGRPVLVDYE-VGRVKGSFRLADG 416          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: W7TYE4_9STRA (31 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.350e-27
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    7 RPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 103
            +PPGC T+FVKNLPY   TE AV  AF  CG++ +VRLAVW HT + KGF YVQF  E  AE AV+ Q +I +GGR + VDY+  G PK S+R  DG
Sbjct:  189 KPPGCDTVFVKNLPYN-TTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYET-GAPKASYRAPDG 283          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A8J2SUI0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUI0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.010e-26
Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 0
Query:    6 PRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 103
            PRP GC+T+FVKNLPY+ +   A+  +F   G+++ VRLAV NHT + KGFGYV F  E  AEAAVRGQ  + + GR + VDYDA GG PK SFR   G
Sbjct:  182 PRPDGCRTVFVKNLPYD-IPSDALRRSFEKFGKINDVRLAVHNHTQRQKGFGYVTFVKETSAEAAVRGQGGVTVRGRAVYVDYDAPGGGPKASFRAATG 279          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: K3WSU1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU1_GLOUD)

HSP 1 Score: 107 bits (266), Expect = 1.460e-25
Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 0
Query:   10 GCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 103
            GCKT+FVK LPY+ + E+A+  A A CG + SVRL +WNHT KLKGFGYV+F  E  A AAV+ ++ + +GGR ++++ D  G PK SFR TDG
Sbjct:  236 GCKTVFVKQLPYD-IEEQALRDALASCGTIMSVRLPIWNHTKKLKGFGYVEFSKEEEAVAAVK-RSGMKVGGRMVIINLDVAGAPKASFRQTDG 327          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: F0YMG0_AURAN (RRM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMG0_AURAN)

HSP 1 Score: 98.6 bits (244), Expect = 6.680e-25
Identity = 50/90 (55.56%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   14 IFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 103
            +F +NLPY+   E AV  AFA  G V+ VRLAVWNHT + KGFGYVQF  E  AEAAVRGQ ++ + GR +  DYD  G P+GS+R   G
Sbjct:    1 VFARNLPYDA-GEDAVRRAFARYGAVADVRLAVWNHTQRRKGFGYVQFVKEAAAEAAVRGQPAVEVDGRAVACDYDDRGAPRGSYRAGAG 89          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: H3GKN1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKN1_PHYRM)

HSP 1 Score: 100 bits (250), Expect = 2.330e-23
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 103
            ANK A +  GC+T+++K LPY+ + E+AV  A APCG +SSVRL +WNHT KLKGFGYV+F  E  A AA R ++ + +G R +L+  DA G  PK SFR  DG
Sbjct:  206 ANKKAIK--GCRTVYIKQLPYD-VEEEAVREALAPCGTISSVRLPMWNHTKKLKGFGYVEFSSEDEALAASR-RSGMRIGDRMVLISLDAPGSAPKASFRQRDG 305          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A225WYL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYL6_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 5.570e-23
Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    2 NKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 103
            NK A +  GC+T+F+K LPYE + E A+  A A CG ++SVRL +WNHT KLKGFGYV+F  E  A AA R ++ + +G R +L+  DA G  PK SFR  DG
Sbjct:  156 NKKAVK--GCRTVFIKQLPYE-VEEDAIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDAAGSAPKASFRQRDG 254          
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A6A3YU63_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YU63_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.330e-22
Identity = 52/103 (50.49%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    2 NKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 103
            NK A +  GC+T+F+K LPYE + E  +  A APCG ++SVRL +WNHT KLKGFGYV+F  E  A AA R ++ + +G R +L+  D  G  PK SFR  DG
Sbjct:  216 NKKAVK--GCRTVFIKQLPYE-VEEDTIREALAPCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDVAGSAPKASFRQRDG 314          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ63_9PHAE3.650e-3663.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP47_ECTSI1.290e-3562.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEI7_9STRA9.610e-3161.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TYE4_9STRA3.350e-2756.7031 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID... [more]
A0A8J2SUI0_9STRA2.010e-2655.56Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
K3WSU1_GLOUD1.460e-2554.26Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
F0YMG0_AURAN6.680e-2555.56RRM domain-containing protein (Fragment) n=1 Tax=A... [more]
H3GKN1_PHYRM2.330e-2352.88Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A225WYL6_9STRA5.570e-2351.46Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6A3YU63_9STRA1.330e-2250.49Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 13..87
e-value: 3.3E-14
score: 63.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 14..84
e-value: 3.7E-14
score: 52.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 12..91
score: 15.050424
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..97
e-value: 1.4E-19
score: 72.5
NoneNo IPR availablePANTHERPTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4Hcoord: 9..88
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 6..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5941contigP-wetherbeei_contig5941:5..313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5941.1.1mRNA_P-wetherbeei_contig5941.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5941 5..313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5941.1.1 ID=prot_P-wetherbeei_contig5941.1.1|Name=mRNA_P-wetherbeei_contig5941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHT
GKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRT
TDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf