mRNA_P-wetherbeei_contig594.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: A0A836CMG6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG6_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.540e-30 Identity = 117/338 (34.62%), Postives = 159/338 (47.04%), Query Frame = 3
Query: 612 LVTSGNETVARLQEQAAGAFLRAHPSPRHTIQVTGLWARSPDGGLREALPLDPTS----CLSGLLHKGAERRLRLWGRLRVSLSLLP-GPIGLSLDPRIRDHPVVKQRFA--PDGG--GNVGGTATAAAASAAEFVASRIGWREPATTA---------VVAAPRRQRGEGLDAVRPGMTLIRLVTRPAGCGEAAATAAASELATLPPEKVCQLFREAAEFEKIIVLTDPAPGDASLDSAAIAAELARGRRTPPYTVTVVVAAARGLRRADVFSSDPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
+V +G ETV LQ +A+ AF RAH H IQV GL+A G EA PLD S C + L G+ +RL GRL V + + P GP+G+ LD + +D +VK A PD + + + A A+ +F++ G +A P G DAV GM + R+ G G + +L + L R + + DP P A+ D+A R YTV++ V A LR ADVFSSDPY LRLAG RT V T SP W ETF F LLS L+ ++W+ ++F DD LGEV + +
Sbjct: 1 MVVTGAETVGWLQSEASAAFSRAHVCASHQIQVIGLYATVKSG---EARPLDAASDALACAAQFLPPGSAGPVRLQGRLMVKVCIDPNGPVGIVLDSKAKDCAIVKALVAAPPDSAQRSSAQRSMSLAPATKKKFMSRFTGXXXXXXXXXXXXXXXXXALAQPLL----GSDAVEEGMLVSRIEAH-LGAGRTLE----HDTISLSAAETRSLLRPLQHLRRAVTFVDPPPEGAAADAA-------EDGRQALYTVSIEVVRAENLRVADVFSSDPYCQLRLAGMSRRTAVRKTTTSPAWHETFVFPLLSLEWELLCELWD-ENFGKDDSLGEVRIDM 318
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: A0A6H5KM70_9PHAE (C2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM70_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 3.190e-15 Identity = 61/165 (36.97%), Postives = 82/165 (49.70%), Query Frame = 3
Query: 1077 VRPGMTLIRLVTRPAGCGEAAATAAASELATLPPEKVCQLFREAAEFEKIIVLTDPAPGDASLDSAAIAAELARGRRTPPYTVTVVVAAARGLRRADVFSSDPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
VRPGM L + R G+ + A L E + L R + I DP G +S +A T PY+V V V ARGL+R+D+F++DP+ LRL G+ +T V T P W ETF F LLS +LV Q+W+ D +D LGE +V L
Sbjct: 323 VRPGMVLAAVAARG---GQGVSEEAVDTLGMGVKEAIETLVRY-QHLHRAITFIDPPSGWSSEKDLDMAGGAVGAGVTCPYSVGVTVVEARGLKRSDIFTADPFAWLRLGGSSHKTSVCRSTSRPRWGETFKFALLSLERSLVVQVWDADELGADVLLGETSVDL 483
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: D8LJF0_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF0_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 5.440e-15 Identity = 61/165 (36.97%), Postives = 82/165 (49.70%), Query Frame = 3
Query: 1077 VRPGMTLIRLVTRPAGCGEAAATAAASELATLPPEKVCQLFREAAEFEKIIVLTDPAPGDASLDSAAIAAELARGRRTPPYTVTVVVAAARGLRRADVFSSDPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
VRPGM L + R G+ + A L E + L R + I DP G +S +A T PY+V V V ARGL+R+D+F++DP+ LRL G+ +T V T P W ETF F LLS +LV Q+W+ D +D LGE +V L
Sbjct: 444 VRPGMVLAAVAARG---GQGVSEEAVDTLGMGVKEAIETLVRY-QHLHRAITFIDPPSGWSSEKDLDMAGGAVGAGVTCPYSVGVTVVEARGLKRSDIFTADPFAWLRLGGSSHKTSVCRSTSRPHWGETFKFALLSLERSLVVQVWDADELGADVLLGETSVNL 604
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: UPI0009E4221C (GTPase activating protein 1-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4221C) HSP 1 Score: 61.2 bits (147), Expect = 2.380e-7 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 1347 RGLRRA--DVFSSDPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGE 1556
RG+ A DV SSDPYV LRL ++TRVI T +P W+E TF++ S + ++++ D+FSSDDP+G+
Sbjct: 15 RGVNLAVRDVRSSDPYVVLRLGKQKLKTRVIKKTVNPEWDEELTFSVEDPSFPVKLEVYDKDTFSSDDPMGD 86
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: A0A0K9PWX9_ZOSMR (C2 domain-containing protein-like n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PWX9_ZOSMR) HSP 1 Score: 57.0 bits (136), Expect = 6.620e-6 Identity = 26/69 (37.68%), Postives = 44/69 (63.77%), Query Frame = 3
Query: 1365 DVFSSDPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
DV SSDPYV L+L ++TRV+ + +P W E T ++ + L+ +++ D+FS+DDP+G+ V +
Sbjct: 23 DVNSSDPYVVLKLESNKLKTRVVKSSVNPEWNEDLTLSVSDPTKPLMIHVYDKDTFSADDPMGDAEVDI 91
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: A0A5C2IAK0_PINMS (Uncharacterized protein n=1 Tax=Pinus massoniana TaxID=88730 RepID=A0A5C2IAK0_PINMS) HSP 1 Score: 58.9 bits (141), Expect = 1.060e-5 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 3
Query: 1365 DVFSSDPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPLGDSDRFVVNAASA 1610
DV SSDPYV L L V+TRVI +P W E ++ S +L Q+++ D+FS+DD +GE V + + +++AASA
Sbjct: 205 DVLSSDPYVILTLGKQTVKTRVIASNLNPVWNEELMLSVPPSSSSLKVQVFDKDTFSADDSMGEAEVAI----QPLISAASA 282
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: UPI000B8CB3AE (C2 domain-containing protein At1g63220-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CB3AE) HSP 1 Score: 55.1 bits (131), Expect = 1.980e-5 Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 3
Query: 1311 PPYTVTVVVAAARGLRRADVFSS-DPYVCLRLAGTVVRTRVIDDTRSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
P T+ V++ A+GL D SS DPYV L ++ ++ P W ETF FT+ + L +I + D+F++DD LGEV +PL
Sbjct: 2 PRGTLEVLLVGAKGLDGTDFLSSVDPYVILTCRTQEQKSSIVSG-EEPQWNETFIFTISEGTTELNLKIMDKDTFTADDFLGEVNIPL 88
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: UPI00053C9AE6 (protein SRC2 homolog isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C9AE6) HSP 1 Score: 56.6 bits (135), Expect = 3.360e-5 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 3
Query: 1380 DPYVCLRLAGTVVRTRVIDDT-RSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
DPYVCL GT RTR D ++PT++E F FTL+ ++ +WN ++ ++DD +G T+PL
Sbjct: 28 DPYVCLEYGGTRHRTRTCTDGGKNPTFQEKFMFTLIEGLRDVKVAVWNSNTLTTDDFIGNATIPL 92
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: UPI00053C94EC (protein SRC2 homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C94EC) HSP 1 Score: 55.8 bits (133), Expect = 4.890e-5 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 3
Query: 1380 DPYVCLRLAGTVVRTRVIDDT-RSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
DPYVCL GT RTR D ++PT++E F FTL+ L +WN ++ ++DD +G T+PL
Sbjct: 31 DPYVCLDYGGTGHRTRTCTDGGKNPTFQEKFMFTLIEGLRELKVAVWNSNTLTTDDFIGNATLPL 95
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Match: UPI00053C545D (uncharacterized protein LOC104807253 isoform X1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C545D) HSP 1 Score: 56.6 bits (135), Expect = 5.650e-5 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 3
Query: 1380 DPYVCLRLAGTVVRTRVIDDT-RSPTWEETFTFTLLSRSCNLVAQIWNCDSFSSDDPLGEVTVPL 1571
DPYVCL GT RTR D ++PT++E F FTL+ ++ +WN ++ ++DD +G T+PL
Sbjct: 28 DPYVCLEYGGTRHRTRTCTDGGKNPTFQEKFMFTLIEGLRDVKVAVWNSNTLTTDDFIGNATIPL 92 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig594.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig594.2.1 >prot_P-wetherbeei_contig594.2.1 ID=prot_P-wetherbeei_contig594.2.1|Name=mRNA_P-wetherbeei_contig594.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=511bp MSRFDTSQTDGAQRKTARYIEVFENQRLHRGKWSAKALLSSDPLPFGDRHback to top mRNA from alignment at P-wetherbeei_contig594:7548..9454+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig594.2.1 ID=mRNA_P-wetherbeei_contig594.2.1|Name=mRNA_P-wetherbeei_contig594.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1907bp|location=Sequence derived from alignment at P-wetherbeei_contig594:7548..9454+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig594:7548..9454+ >mRNA_P-wetherbeei_contig594.2.1 ID=mRNA_P-wetherbeei_contig594.2.1|Name=mRNA_P-wetherbeei_contig594.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1533bp|location=Sequence derived from alignment at P-wetherbeei_contig594:7548..9454+ (Phaeothamnion wetherbeei SAG_119_79)back to top |