mRNA_P-wetherbeei_contig5935.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A6S9F1B3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9F1B3_HETAK) HSP 1 Score: 164 bits (414), Expect = 4.110e-44 Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1
Query: 46 ATLEETCEIIVRRLKESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEELTLR---QSASITRGSSLLIDDDARNIQVALLSQVK 522
A LE+ IV+R +E +NFLA+DFDLT ++ HTGGRW G A +L ++RP FR L+P A+ AG+ AIVTF+PQ ++ VL P QI +RGEDG+WEY+G G T GKQAHMASAVEEL R + +ITR +++L+DDD N+ +AL VK
Sbjct: 24 ADLEDVSRRIVQRFQEQ-GLNFLALDFDLTVLDVHTGGRWLGRAADLTPHIRPLFRHLIPAALDAGLKTAIVTFSPQVHMISAVLEEAFPGKGGQITIRGEDGSWEYEGAGSTAGKQAHMASAVEELVARAGPDAPTITRATTVLVDDDLNNVSIALQEGVK 184
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S4QG65_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QG65_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.960e-41 Identity = 81/158 (51.27%), Postives = 108/158 (68.35%), Query Frame = 1
Query: 52 LEETCEIIVRRLKESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEEL-TLRQSASITRGSSLLIDDDARNIQVALLSQVK 522
L CE V RL E +INFLAIDFD T ++ HT G+W+G+A EL+ +VRP F+ L+P AI A I VA+VTF+PQ G ++ VL + P+++ I +RG D TW Y G G GKQ+HMASAVEE+ + I+R ++LLIDDD NI+VALL V+
Sbjct: 11 LLSQCEEAVTRLIE-LKINFLAIDFDQTIVDVHTHGQWKGSAHELSTHVRPLFQHLIPAAITADIKVAVVTFSPQCGQIKDVLEIIFPEFSNGIVVRGRDRTWSYLGAGSKEGKQSHMASAVEEIEAMHTKLDISRNTTLLIDDDVSNIKVALLDGVR 167
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S2I2G2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2G2_9STRA) HSP 1 Score: 155 bits (391), Expect = 5.520e-41 Identity = 81/165 (49.09%), Postives = 114/165 (69.09%), Query Frame = 1
Query: 52 LEETCEIIVRRLKESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEEL-TLRQSASITRGSSLLIDDDARNIQVALLSQVKFSAFLSP 543
L CE + RL+E +INFLAIDFD T ++ HT G+W+G+A EL+ +VRP F+ L+ AI A I VA+VTF+PQ G ++ VL LP+ + I +RG D TW Y G G GKQ+HMASAVEE+ ++ + I++ ++LLIDDD NI+VALL V+ + +L+P
Sbjct: 11 LSNQCEEAISRLQE-LKINFLAIDFDKTIVDVHTHGQWKGSAHELSTHVRPLFQHLISAAIGADIKVAVVTFSPQCGQIKDVLEIALPESSNSIVVRGRDRTWSYVGAGSKDGKQSHMASAVEEIESMHEKLDISKNTTLLIDDDVNNIKVALLDGVR-AVWLNP 173
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: B8CB40_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB40_THAPS) HSP 1 Score: 152 bits (385), Expect = 4.460e-40 Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 1
Query: 52 LEETCEIIVRRLKESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEELTLRQSASIT---RGSSLLIDDDARNIQVAL 507
L++ C V++L + +INFLAIDFD T ++ HTGGRW+GT +EL ++RP F LVP+A + I VAIVTF+ QT +R+VL PDYA+ IP+RG D TWEY G G GKQ HMAS EEL + + +T + ++LLIDDD RNI+++L
Sbjct: 12 LQKRCSAAVQKLVD-LKINFLAIDFDQTLVDVHTGGRWKGTTQELVQHMRPLFLRLVPLASQHNIRVAIVTFSRQTERIREVLELSYPDYADVIPIRGCDNTWEYKGSGMRMGKQEHMASVSEELIAKPAMGVTDVRKDTTLLIDDDPRNIRLSL 165
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S1U168_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U168_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.190e-39 Identity = 72/140 (51.43%), Postives = 99/140 (70.71%), Query Frame = 1
Query: 91 ESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVL-PDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEELTLRQSASITRGSSLLIDDDARNIQVAL 507
+ ++N LA+DFD T I+ HTGG+W + EELA YVR FF++++P AI G++VA+VTFTPQT +V VL+ D A +IP+RG+D +WEY G G GKQ HMASA EEL + I RG++LL+DDD N+++AL
Sbjct: 62 KGAQVNLLAVDFDCTLISTHTGGQWSYSCEELAAYVRDFFKLMIPAAIETGLHVAVVTFTPQTHLVHGVLKAAFGADVAAKIPVRGDDKSWEYRGDGVCCGKQGHMASAAEELMVMHDIHIERGTTLLVDDDISNVRLAL 201
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S1G1M2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1M2_9STRA) HSP 1 Score: 150 bits (378), Expect = 6.310e-39 Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 31 PSAPGATLEETCEIIVRRLKESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEEL-TLRQSASITRGSSLLIDDDARNIQVALLSQVK 522
P +E+ C+ + + E INFLA+DFDLT I+ HTGG+W+GT +ELA ++RP F+ L+ A A I +AIVTF+PQ + VL P++ +IP+RG D +W Y+GVG GKQ+HMASA EEL T I++ S+LLIDDDA NI+ A V+
Sbjct: 19 PERERRVVEKCCKAVSKL--EELNINFLALDFDLTTIDVHTGGKWEGTPDELASHIRPIFKHLIARAHAANIAIAIVTFSPQVRHIGSVLDKTFPEFGSRIPIRGRDRSWTYEGVGCKDGKQSHMASAAEELMTTNAGLQISKDSTLLIDDDANNIRTAFRDHVR 181
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S4EE98_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE98_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.130e-38 Identity = 75/139 (53.96%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 103 INFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEELTLRQSASITRGSSLLIDDDARNIQVALLSQV 519
INFLA+DFD+T I++HT GRW GTA EL +VRP R L+ A+ A ++VAIVT +PQT ++R+V R + P + I +RG DG W Y G G + GKQ H+ASAVEEL+ +A I+R S+LLIDDDA+NI AL++ V
Sbjct: 10 INFLAVDFDMTLIDRHTEGRWSGTASELLRHVRPEMRQLLRDALDAQMFVAIVTLSPQTSLIREVTRLLFPKDFQLIIIRGNDGNWFYGGQGSSRGKQPHIASAVEELSHAHAAQISRRSTLLIDDDAQNINDALVNGV 148
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S0CHW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHW4_9STRA) HSP 1 Score: 145 bits (366), Expect = 7.800e-38 Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 100 RINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVP-MAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEEL-TLRQSASITRGSSLLIDDDARNIQVALLSQVK 522
+INFLAIDFDLT I+ HTGG W+GT ELA +VRP F+ LV A+ GI +AIVTF+PQ + VL+ PD+ + IP+RG D +W Y+G G GKQA+MASA EEL ++ T+ S+LLIDDD NI++AL V+
Sbjct: 8 KINFLAIDFDLTMIDVHTGGTWKGTPMELASHVRPLFKQLVTEAAVNGGIKIAIVTFSPQVRNIGDVLKVTFPDFHDSIPIRGRDKSWTYEGGGSREGKQAYMASAAEELGSIFPGEDFTKNSTLLIDDDVNNIKIALKDGVR 150
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: B7FWS8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWS8_PHATC) HSP 1 Score: 141 bits (355), Expect = 6.890e-36 Identity = 76/155 (49.03%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 46 ATLEETCEIIVRRLKESCRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVL-PDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEELTLRQSASITRGSSLLIDDDARNIQVAL 507
AT E + RL+E +NFLAIDFD+T ++ HTGGRW G+ EEL +VR F+ L+ +++ I VA+VTFT Q V+ VL ++ P+ A +IP+RG D TW Y G G GKQA++ASAVEEL A IT+ +++LIDDD RNI AL
Sbjct: 2 ATRTNAIESSINRLQE-LGVNFLAIDFDMTILDTHTGGRWVGSLEELLGHVRHEFKQLITASLQKNIRVAVVTFTAQISFVKGVLEAIVGPEEAARIPIRGNDRTWSYQGNGSRDGKQAYIASAVEELEQSGDAKITKSTTVLIDDDRRNIHHAL 155
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Match: A0A7S2KRM2_9STRA (Hypothetical protein n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRM2_9STRA) HSP 1 Score: 143 bits (360), Expect = 7.060e-36 Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 97 CRINFLAIDFDLTFINQHTGGRWQGTAEELAVYVRPFFRVLVPMAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVGQTTGKQAHMASAVEELTLRQS---ASITRGSSLLIDDDARNIQVALLSQVK 522
C INFLAIDFD T I+ HTGGRWQGTA EL ++RP F LVP A I +AI TF+ QT +R V+ P+ AE I +RG D TWEY G G GKQ HMASA EEL Q+ +T+ ++LLIDDD +NI+++L + +
Sbjct: 75 CGINFLAIDFDQTMIDVHTGGRWQGTALELTEHLRPVFLHLVPAATNRNIRIAICTFSGQTKHIRDVMEYAFPNIAELIVIRGNDKTWEYHGNGFKRGKQQHMASAAEELLAEQALGVTDVTKATTLLIDDDPKNIRMSLKDRTR 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5935.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5935.1.1 >prot_P-wetherbeei_contig5935.1.1 ID=prot_P-wetherbeei_contig5935.1.1|Name=mRNA_P-wetherbeei_contig5935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp MAIRAGIYVAIVTFTPQTGIVRQVLRTVLPDYAEQIPLRGEDGTWEYDGVback to top mRNA from alignment at P-wetherbeei_contig5935:326..2274- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5935.1.1 ID=mRNA_P-wetherbeei_contig5935.1.1|Name=mRNA_P-wetherbeei_contig5935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1949bp|location=Sequence derived from alignment at P-wetherbeei_contig5935:326..2274- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5935:326..2274- >mRNA_P-wetherbeei_contig5935.1.1 ID=mRNA_P-wetherbeei_contig5935.1.1|Name=mRNA_P-wetherbeei_contig5935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig5935:326..2274- (Phaeothamnion wetherbeei SAG_119_79)back to top |