mRNA_P-wetherbeei_contig5934.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5934.1.1
Unique NamemRNA_P-wetherbeei_contig5934.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: D7G6A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A6_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 1.850e-177
Identity = 249/355 (70.14%), Postives = 304/355 (85.63%), Query Frame = 3
Query:  183 RRIVCSLLSGRPLRIDDIRPSPVT-NRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            +R+VCS+LSGR +RIDDIRP P T +  E V +G++ +EA+FLRLVDKLTNGT+VEINETGTTLRFKPG + GG+  HDCGT+R++GWF+EG++PL LFSK PF L+L+G+TN+  DLSVDA++AV LPLLK FGVAE+GGL+L++KRRGAPP GGGLVE+ C  VR+L P+D T+ G+I+RIRGNAYC KVSPQ+ANRVAESSRG LNRLLPDVWVHT+H AG   G+SPGFAL+LVAEST+G LL+AE  AA  GTLPEDLG   S L+LEE++ GGCVDSSHQ+LA+LLMVLCPEDVSRLR+G+LT+YSV  LR LRDFFG  FR+KPD  +STV++SC GIG+KNL+RGAT
Sbjct:   47 QRVVCSVLSGRAIRIDDIRPFPTTTDYQEEVQMGIMGHEAAFLRLVDKLTNGTQVEINETGTTLRFKPGYVTGGRESHDCGTSRSLGWFIEGLLPLALFSKTPFNLTLSGITNDDVDLSVDALKAVTLPLLKHFGVAEEGGLELKVKRRGAPPGGGGLVEFRCPIVRELKPIDFTEPGLIKRIRGNAYCTKVSPQIANRVAESSRGLLNRLLPDVWVHTDHHAGRTGGESPGFALSLVAESTTGVLLVAE-TAADKGTLPEDLGNFGSKLILEEIKNGGCVDSSHQSLAMLLMVLCPEDVSRLRIGKLTRYSVTYLRHLRDFFGAYFRLKPDPQTSTVLVSCQGIGFKNLSRGAT 400          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: A0A835YR39_9STRA (RNA 3'-terminal phosphate cyclase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR39_9STRA)

HSP 1 Score: 508 bits (1309), Expect = 5.250e-177
Identity = 254/380 (66.84%), Postives = 306/380 (80.53%), Query Frame = 3
Query:  111 RDGQLLPFSGS*HSFFKRRRFALSRRIVCSLLSGRPLRIDDIRPSPVTNRS--EVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            +D  +L F G  H           +R+VC++LSG+P+RID IRPSP+   S  + + +GLVDYEASFLRL+DKLTNGTK+EINETGT+L  KPG +  G+ EHDCGT+R IGWF+EG++PL LFSKRP  L+L G+TN+  DLSVDA+RAV LPLLKRFGVA++GGLDL++K RG PP GGG VE+ C  VRQLTPVD+TDAG+I+R+RGNA CAKVSPQLANRVAES++G LNRLLPDVWVHT+H AG   G SPGFA +LVAEST+G LLMAE AA QG  LPEDLG     LLL+E+  GGCVDS+HQ+LA+LLMVLCPEDVSRLRVG+LT YSV+ LR LRDFFG  F+IKPD ++S+VM+SCLG GYKNL+R AT
Sbjct:   21 KDSNVLRFKGCTH---------FRQRVVCAILSGKPIRIDSIRPSPLEAGSLNDNIEIGLVDYEASFLRLIDKLTNGTKIEINETGTSLFLKPGFVTSGRQEHDCGTSRCIGWFIEGVLPLALFSKRPLHLTLNGITNDNSDLSVDAMRAVTLPLLKRFGVADEGGLDLKVKCRGFPPLGGGSVEFTCPIVRQLTPVDMTDAGLIKRVRGNAACAKVSPQLANRVAESAKGVLNRLLPDVWVHTDHSAGANGGLSPGFACSLVAESTTGVLLMAETAAEQG-MLPEDLGVTAGELLLDEISNGGCVDSTHQSLAMLLMVLCPEDVSRLRVGKLTAYSVQYLRHLRDFFGTVFKIKPDLETSSVMLSCLGTGYKNLSRSAT 390          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: W7TZF4_9STRA (Rna terminal phosphate cyclase-like 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZF4_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 6.430e-138
Identity = 208/354 (58.76%), Postives = 266/354 (75.14%), Query Frame = 3
Query:  183 RRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            +R+VC+ LSGRPL I  IR       SE    GL D+E  FLRL+++LTNG +VEINETGT LR+ PG+IVGG+ EHDCG+AR+I WFLEGI+PL +F+K+P  LSL+G+TN+  D+SVD ++AV LP+L  FG     G  L +K+RG PP GGG VE+ C  VR+L P +L DAG+I+R+RG AYCAK+SPQ ANRV  S+RG LNRLLPDV+VHT+H  GL  G SPGF LTLVAEST+G LL  +   A+ G LPED+G+R S LLLEEVRRGGCVDS  QAL LLLM L PEDVS++R+G+LT + ++ LRL R+ FGVTF+I+ D ++ TV++SCLG G +N ++  T
Sbjct:   14 QRLVCATLSGRPLLITHIR-------SEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFGAE---GATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVD-VHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: A0A024U3U9_9STRA (18S rRNA biogenesis protein RCL1 n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3U9_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 1.110e-134
Identity = 202/377 (53.58%), Postives = 273/377 (72.41%), Query Frame = 3
Query:  114 DGQLLPFSGS*HSFFKRRRFALSRRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
             G  L F G  H           +R++C+ LSGR +RID+IR        +    G+ ++EA+FLRL+D +TNG+++EINETGT L++ PG IVGG ++HDCGT R+IGWFLE ++ L  F+KRP   +L G+TN+  D SVD  +AV +PLLK FG+ E  GLD ++K+RGAPP GGG V + C  VRQL  V L + G I+RIRG AYC +VSPQ +NR+ ++SRG  N+LLPDV+++++H  G  +G SPG+AL+LVAE+T+G LL AE  AA  G+LPED+    S LL EE++RGGCVD+S+Q LALLLM L PEDVS++R G+LT YS++ LR LRDFFGVTF+IK DH+S +V++SCLGIG+KNL++  T
Sbjct:   23 SGGTLKFKGCAH---------FRQRLICATLSGRRIRIDNIR-------GDSEEPGISEFEANFLRLLDSITNGSQIEINETGTVLKYAPGFIVGGTIDHDCGTKRSIGWFLEALVALAPFAKRPLVATLKGITNDDVDASVDYFKAVTIPLLKHFGLDE--GLDFKVKKRGAPPLGGGEVLFRCPTVRQLKSVHLVEEGFIKRIRGVAYCTRVSPQTSNRIVDTSRGLFNKLLPDVYIYSDHYRGTDSGLSPGYALSLVAETTTGVLLGAE-TAATSGSLPEDVASMASHLLCEEIQRGGCVDTSNQCLALLLMTLSPEDVSKIRFGKLTPYSMQYLRHLRDFFGVTFKIKADHESKSVLLSCLGIGFKNLSKKVT 380          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: A0A662WTB3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTB3_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 1.150e-134
Identity = 203/378 (53.70%), Postives = 274/378 (72.49%), Query Frame = 3
Query:  111 RDGQLLPFSGS*HSFFKRRRFALSRRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            R+G +L   G  H           +R+VC+ LSGRP+ I++IR       SE    GL  +EA+ LRL+D+LTNG+ +EINETGT L++ PG +VGG++EHDCG AR+IGWFLE I  L  F+K P  ++L G+TN+ ED SVDA +A  LPL++ FG+ E  GLDL++K+RGAPP GGG V + C  VRQL  + L + G I+RIRG AY  +VSPQ +NR+ E+SRG  N+LLPDV+++++H  G ++G+SPGFAL+LVAE+T+G  L AE AAA GG LPED+    S +L EE+ +GGCVD+S+QAL LL M L PEDVS++R G+LT YS++ LR LRDFFG+TF+IKPD ++ TV++SCLG G+KNLA+  T
Sbjct:   13 RNGGVLKLQGCAH---------FRQRLVCATLSGRPVIIEEIR-------SEDDEPGLAAFEANLLRLLDRLTNGSHIEINETGTKLKYSPGFVVGGRIEHDCGVARSIGWFLEVIAALAPFAKLPLHVTLRGITNDNEDASVDAFKATTLPLMRHFGIDE--GLDLKVKKRGAPPLGGGEVVFSCPQVRQLRSIHLVEEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGVFLGAEAAAA-GGNLPEDVATLASHMLCEEISKGGCVDTSNQALVLLYMALSPEDVSKVRFGKLTPYSIQCLRHLRDFFGITFKIKPDPETKTVLLSCLGTGFKNLAKKVT 371          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: A0A2D4BYI5_PYTIN (RNA 3'-terminal phosphate cyclase, putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BYI5_PYTIN)

HSP 1 Score: 397 bits (1020), Expect = 1.880e-133
Identity = 203/384 (52.86%), Postives = 273/384 (71.09%), Query Frame = 3
Query:   93 KFAVE*RDGQLLPFSGS*HSFFKRRRFALSRRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            K A   R G +L   G  H           +RIVC+ LSGRP+ I++IR       SE    GL ++EA+FLRL+DKLTNG+ +EINETGT L++ PG IVGG++EHDCGT RAIGWFLE +  L  F   P  L+L G+TN+  D+SVDA +   LPL+K FG+ E  GLD ++K+RGAPP GGG V + C  VRQL  + L + G I+RIRG AY  +VSPQ +NR+ ++SRG  N+LLPDV+++++H  G ++G+SPGFAL+LVAE+T+G  L AE AAA GG LPED+    S LL EE+++GGCVD+++QAL LL M L PEDVS++R G+LT Y+++ LR LRDFFG+TF+IKPD ++ T+ +SCLG G+KNL++  T
Sbjct:    7 KAASTQRAGTVLRMQGCTH---------FRQRIVCATLSGRPICIEEIR-------SEDEEPGLTEFEANFLRLMDKLTNGSHIEINETGTKLKYSPGFIVGGRIEHDCGTKRAIGWFLEAVAALAPFGXLPLHLTLRGITNDNVDMSVDAFKTTTLPLMKHFGIDE--GLDFKVKKRGAPPLGGGEVIFSCPIVRQLQSIHLIEEGFIKRIRGIAYSTRVSPQTSNRIVDASRGIFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGVFLGAE-AAATGGNLPEDVATLASHLLCEEIKKGGCVDTTNQALVLLYMTLSPEDVSKVRFGKLTPYTIQFLRHLRDFFGITFKIKPDPETKTIYLSCLGTGFKNLSKKVT 371          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: K3WKI0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKI0_GLOUD)

HSP 1 Score: 397 bits (1020), Expect = 2.010e-133
Identity = 201/378 (53.17%), Postives = 270/378 (71.43%), Query Frame = 3
Query:  111 RDGQLLPFSGS*HSFFKRRRFALSRRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            R G +L   G  H           +R+VC+ LSGRP+ I++IR       SE    GL D+EA+FLRL+D++TNG+ +EINETGT L++ PG IVGG++EHDCG  R+IGWFLE +  L  F K+P QL L G+TN+  D+SVDA +   LPL+K FG+ E  GLD ++K+RGAPP GGG V + C  VRQL  + L + G I+RIRG AY  +VSPQ +NR+ E+SRG  N+LLPDV+++++H  G ++G+SPGFAL+LVAE+T+G  L AE AAA GG LPED+    S LL EE+ +GGCVD+++QAL LL M L PEDVS++R G+LT Y+++ LR LRDFFG+TF+IKPD  + TV +SCLG G+KNL++  T
Sbjct:   15 RQGTVLRMQGCSH---------FRQRLVCATLSGRPICIEEIR-------SEDEEPGLTDFEANFLRLLDRITNGSHIEINETGTKLKYSPGFIVGGRIEHDCGVKRSIGWFLEAVAALAPFGKQPLQLVLRGITNDNVDISVDAFKTTTLPLMKHFGIDE--GLDFKVKKRGAPPLGGGEVLFSCPLVRQLRSIHLIEEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGIFLGAE-AAATGGNLPEDVASLASSLLCEEISKGGCVDTTNQALVLLYMALSPEDVSKVRFGKLTPYTIQYLRHLRDFFGITFKIKPDPATKTVFLSCLGTGFKNLSKKVT 373          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: M4B9B6_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B9B6_HYAAE)

HSP 1 Score: 389 bits (1000), Expect = 1.690e-130
Identity = 200/374 (53.48%), Postives = 269/374 (71.93%), Query Frame = 3
Query:  123 LLPFSGS*HSFFKRRRFALSRRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            LL F G  H           +R+VC+ LSGRPL I+DIR       SE  N GL  +EAS LRL+D++T+G+ +EINETGT L+F+PGV++GG+  HDCGT RAIGWFLE +  L  F+K P  ++L G+TN+  D S+D  +A  LPLL+ FG+ E  GLDL +K+RGAPP GGG V + C  VR+L  V L D G I+R+RG AY  +VSPQ +NR+ E+SRG  N+LLPDV+++++H  G ++G+SPGFAL+LVAE+T+G  L AE AA + G LPE +  R S  L EE+ RGGCVDSS+QAL L+LM L PEDV+++R G+LT +S+  LR LR+FFG+TF+IKPD ++ TV++SCLG+G+KNLA+  T
Sbjct:   12 LLRFQGCAH---------FRQRLVCAALSGRPLIIEDIR-------SEDENPGLAPFEASLLRLLDRVTSGSHLEINETGTKLKFQPGVVLGGRFVHDCGTGRAIGWFLEVLAALAPFAKLPLHVTLDGITNDHVDTSIDTFKATTLPLLRHFGLDE--GLDLVVKKRGAPPLGGGQVIFRCPQVRELRAVHLVDEGFIKRVRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGIFLGAESAA-EPGDLPEGVATRASHALCEEISRGGCVDSSNQALVLMLMTLGPEDVAKVRFGKLTPHSIECLRHLREFFGITFKIKPDPETKTVLLSCLGVGFKNLAKKVT 366          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: A0A5D6Y6F9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6F9_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 2.140e-130
Identity = 198/354 (55.93%), Postives = 261/354 (73.73%), Query Frame = 3
Query:  183 RRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            +R+VC+ LSGR + I+ IR       +E    GL D+EA+FLRL+D+LTNG+ +E+NETGT L++ PG IVGG+VEHDCGT RAIGWFLE +  L  F K P +  L GVTN+  D SVDA +A  LPLLK FG+ E  GLD +IK+RGAPP GGG V + C  VR+L  + L + G I+RIRG AY  +VSPQ +NR+ E+SRG  N+LLPDV+++++H  G ++G+SPGFAL+LVAE+T+G  L AE AAA GG LPED+    S LL EE+ +GGCVD+++QAL LL M L PEDVS++R G+LT Y+++ LR LRDFFG+TF+IKPD  + TV +SCLG G+KNL++  T
Sbjct:   30 QRLVCATLSGRQVVIEGIR-------AEDEAPGLTDFEANFLRLLDRLTNGSHIEVNETGTKLKYSPGFIVGGRVEHDCGTGRAIGWFLEPLAALAPFGKLPLRAVLRGVTNDNVDTSVDAFKATTLPLLKHFGLDE--GLDFKIKKRGAPPLGGGEVVFTCPLVRELRSIHLIEEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGVFLGAEAAAA-GGNLPEDVASLASSLLCEEISKGGCVDTANQALVLLFMALSPEDVSKVRFGKLTPYTIQHLRHLRDFFGITFKIKPDPATKTVFLSCLGTGFKNLSKKVT 373          
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Match: A0A0N7L387_PLAHL (18s rrna biogenesis protein rcl1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L387_PLAHL)

HSP 1 Score: 388 bits (996), Expect = 6.580e-130
Identity = 192/354 (54.24%), Postives = 269/354 (75.99%), Query Frame = 3
Query:  183 RRIVCSLLSGRPLRIDDIRPSPVTNRSEVVNVGLVDYEASFLRLVDKLTNGTKVEINETGTTLRFKPGVIVGGKVEHDCGTARAIGWFLEGIIPLGLFSKRPFQLSLAGVTNNVEDLSVDAIRAVALPLLKRFGVAEDGGLDLQIKRRGAPPEGGGLVEYWCLPVRQLTPVDLTDAGMIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAGKSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRGGCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFRIKPDHDSSTVMMSCLGIGYKNLARGAT 1244
            +R++C++LSGRPL I++IR       SE  N GL  +EA+ LRL+D++T+G+++EINETGT L+ +PG+++GG++ HDCGT RAIGWFLE +  L  F+K+P   +L GVTN+  D SVD  +A  LPLL+ FG+  D GLD  +K+RGA P GGG V + C  +RQL  + LT+ G I+RIRG AY  +VSPQ +NR+ ESSRG  N+LLPDV+++++H  G+++G SPGFAL+LVAE+T+G  L +E AAA+ G LPED+  R S  L EE++RGGCVDS++Q + LLLM L PEDV+++R+G+LT +S+  LRLLR+FFGVTF+IKPD ++ TV++SCLG+G+KNLA+  T
Sbjct:   22 QRLICAILSGRPLIIENIR-------SEDENPGLAAFEANLLRLLDRITSGSRLEINETGTKLKLQPGLVLGGQITHDCGTGRAIGWFLEVLAVLAPFAKQPLHATLDGVTNDHIDNSVDNFKATTLPLLRHFGL--DDGLDFVVKKRGAQPLGGGQVIFRCPLIRQLKAISLTEEGFIKRIRGVAYSTRVSPQTSNRIVESSRGLFNKLLPDVYIYSDHFKGVESGHSPGFALSLVAETTTGVFLGSE-AAAEPGDLPEDVATRASHALCEEIQRGGCVDSTNQTIVLLLMALGPEDVAKVRIGKLTPHSISCLRLLREFFGVTFKIKPDPETKTVLLSCLGVGFKNLAKKVT 365          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5934.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A6_ECTSI1.850e-17770.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR39_9STRA5.250e-17766.84RNA 3'-terminal phosphate cyclase domain-containin... [more]
W7TZF4_9STRA6.430e-13858.76Rna terminal phosphate cyclase-like 1 n=2 Tax=Mono... [more]
A0A024U3U9_9STRA1.110e-13453.5818S rRNA biogenesis protein RCL1 n=5 Tax=Aphanomyc... [more]
A0A662WTB3_9STRA1.150e-13453.70Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A2D4BYI5_PYTIN1.880e-13352.86RNA 3'-terminal phosphate cyclase, putative n=2 Ta... [more]
K3WKI0_GLOUD2.010e-13353.17Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
M4B9B6_HYAAE1.690e-13053.48Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
A0A5D6Y6F9_9STRA2.140e-13055.93Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0N7L387_PLAHL6.580e-13054.2418s rrna biogenesis protein rcl1 n=1 Tax=Plasmopar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5934contigP-wetherbeei_contig5934:503..3440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6A6
Preferred nameRCL1
PFAMsRTC,RTC_insert
Model size1292
Max annot lvl2759|Eukaryota
KEGG koko:K11108
KEGG Pathwayko03008,map03008
Hectar predicted targeting categorymitochondrion
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0030234,GO:0030490,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0098772,GO:0140098,GO:1901360,GO:1990904
Exons8
Evalue6.78e-84
EggNOG OGsCOG0430@1|root,KOG3980@2759|Eukaryota
DescriptionRNA-3'-phosphate cyclase activity
Cds size534
COG categoryA
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5934.1.1prot_P-wetherbeei_contig5934.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5934 2044..3395 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186876.4583304-UTR-P-wetherbeei_contig5934:502..7771683186876.4583304-UTR-P-wetherbeei_contig5934:502..777Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5934 503..777 +
1683186876.4708807-UTR-P-wetherbeei_contig5934:894..9601683186876.4708807-UTR-P-wetherbeei_contig5934:894..960Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5934 895..960 +
1683186876.4812126-UTR-P-wetherbeei_contig5934:1156..12931683186876.4812126-UTR-P-wetherbeei_contig5934:1156..1293Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5934 1157..1293 +
1683186876.4954338-UTR-P-wetherbeei_contig5934:1568..17041683186876.4954338-UTR-P-wetherbeei_contig5934:1568..1704Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5934 1569..1704 +
1683186876.512597-UTR-P-wetherbeei_contig5934:1944..20431683186876.512597-UTR-P-wetherbeei_contig5934:1944..2043Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5934 1945..2043 +
1683186876.577143-UTR-P-wetherbeei_contig5934:3395..34401683186876.577143-UTR-P-wetherbeei_contig5934:3395..3440Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5934 3396..3440 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186876.523939-CDS-P-wetherbeei_contig5934:2043..21251683186876.523939-CDS-P-wetherbeei_contig5934:2043..2125Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5934 2044..2125 +
1683186876.5345442-CDS-P-wetherbeei_contig5934:2314..24631683186876.5345442-CDS-P-wetherbeei_contig5934:2314..2463Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5934 2315..2463 +
1683186876.5453355-CDS-P-wetherbeei_contig5934:2735..29811683186876.5453355-CDS-P-wetherbeei_contig5934:2735..2981Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5934 2736..2981 +
1683186876.5662308-CDS-P-wetherbeei_contig5934:3338..33951683186876.5662308-CDS-P-wetherbeei_contig5934:3338..3395Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5934 3339..3395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5934.1.1

>prot_P-wetherbeei_contig5934.1.1 ID=prot_P-wetherbeei_contig5934.1.1|Name=mRNA_P-wetherbeei_contig5934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp
MIRRIRGNAYCAKVSPQLANRVAESSRGPLNRLLPDVWVHTEHCAGLKAG
KSPGFALTLVAESTSGTLLMAEGAAAQGGTLPEDLGQRVSLLLLEEVRRG
GCVDSSHQALALLLMVLCPEDVSRLRVGRLTQYSVRVLRLLRDFFGVTFR
IKPDHDSSTVMMSCLGIGYKNLARGAT*
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mRNA from alignment at P-wetherbeei_contig5934:503..3440+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5934.1.1 ID=mRNA_P-wetherbeei_contig5934.1.1|Name=mRNA_P-wetherbeei_contig5934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2938bp|location=Sequence derived from alignment at P-wetherbeei_contig5934:503..3440+ (Phaeothamnion wetherbeei SAG_119_79)
CTTTAAAGCATAAGGAGCCATCCAGGGGTATGCAGCCATCCGAGACGAAG ACCCGCTATCGCGGTTGCGCCAACTTTCGAGCAAGGTTCTTAAAATTTGC CGTAGAGTAAAGGGATGGACAGTTGCTTCCCTTCTCTGGATCCTGACACT CCTTCTTCAAACGCCGTCGCTTCGCGCTCTCCCGCAGGATCGTATGCTCG CTGCTCAGTGGACGACCGTTGCGGATTGACGACATCAGACCGAGCCCGGT GACAAATCGCAGTGAAGTTGTGAATGTAAGTTCATACGCGGAGCCCGATG CGGAGCCCGACGAGCAAAGTTAGGGCGCTTGGTAACTTAAGCTAACGACC ATAATGCTCTGTATTGCCCACGGCCTCTCTCTCCCTGTTCAGGTCGGATT AGTGGATTACGAAGCTTCCTTCTTGAGGCTAGTGGACAAGCTCACCAATG GAACCAAGGTAAGATCGCCAGCACCCGATGTCACTTCTTTCTACAATCGG AACCTCCCGCCCGTTTTGTTAGGGTAGGTGAACTTCGACGAGCGGTTGAG CAGGAAGCTAAAAATTGCTCGTTGTTTGGGCTAGTCCAGCAGCGGAAGCT CGACGTCGTTTCCGTCCTGTTTTCCTGTGCTCGCGGCGACACTGCACCCT GCAGGTGGAGATCAATGAGACGGGTACGACGCTGCGGTTCAAGCCGGGCG TCATTGTTGGAGGCAAGGTGGAGCACGACTGTGGTACGGCACGGGCCATC GGGTGGTTCCTGGAGGGCATCATCCCGCTGGGACTCTTCAGGTGGGCTCA GCTTGCAGAAGATGAGCTTTAAATCTTGAGTTGCTCGAGCGACAGCGGCA GTAGTTTGAGTGTGACGAGCACTAGATCCGGTTTGGATGGGTTGGTTTTT TGCATCAACTTTTCTGCTTCTTCGAAAAGATAGTTAAGGCTGAAGAACTG AAGCTACTGTATTTTTACAAGACGTCTGTCTTGTTACAAGGCACGTCGCT TAATGTCTGCTTTGTACGTCTGGAATCGGCCATGCCTCTCCGATTTCCAC GCGTTGATCAATGCAGCAAGCGGCCGTTTCAGCTGTCGCTGGCGGGGGTG ACCAACAACGTTGAGGATCTGTCGGTGGACGCCATCCGCGCCGTCGCTCT TCCGCTGCTGAAGCGGTTCGGAGTCGCCGAAGACGGCGGCCTTGACCTGC AGGTGGGTTTGCGATGATGGCAAAATGGTGTATTGAAGATATGGACGCAT CCTTTTGGCAGCACACTTTCAGTTTCACTATGGAGGCAACTCGGGGTATT CTTTGCAACGTGACAAATAGCGTGTCTTACTTGTGCTCGCCTGAGACAAA ACAACCCACATGGCGACGCTGGCGTGCATTCTTCGTAACTTCTTTTCACT TTCTGCACCGCCGCCGTTCGCTTCTGCTGCTATTGCCGCCAGATCAAGCG GCGCGGGGCGCCGCCGGAGGGCGGCGGCCTGGTGGAGTACTGGTGTCTGC CGGTTAGGCAGCTGACGCCGGTCGACTTGACAGATGCCGGCATGATCCGG CGGATCCGCGGCAATGCCTACTGTGCCAAGGTCTCGCCGCAGCTCGCCAA CCGCGTGGCAGAGTCCTCTCGAGGTTAGGGAGCGATTCTACGTGTATCCT CCTGCATCCCATGTTCTCTATGATATTTGTTTGCCCGGTGATGTGACCTG TGCCAGCAAGAAGGGATGCACACAGTTTCGACATTATATGCGCTGAGCTG CTCAGGTATTAACGTGCATCCGTCGACATTGCTTGCACGTCTTCTTGCCC CCCTTCTTTCAGGGCCGCTGAACCGGCTGCTGCCGGACGTGTGGGTCCAC ACGGAGCACTGCGCGGGGCTAAAGGCGGGGAAGTCGCCGGGATTTGCGCT GACACTGGTGGCGGAGTCCACTAGCGGCACACTGCTCATGGCTGAGGGCG CGGCGGCGCAGGTGGGTAGCACCGGCAATAATGGTGGCCATGCTTTGGCT TCTTTTTCTTGCTTCCTTTTGTGTGGCTTTACAAGCCAGCCATTGTGGAA CCAAATGTCTCTTTCGGCGTTTTGGGTTTTGTCACCGGTAGGTCGGCGGT TCAGAACCGCATCAACACCTTCCCACTTCTATCGCTGCGCACTCGTTTCA TTTCCTTGCCTCGTATCCCTTCTCGTTCTTACCTCATCCACCTTTTTTCC ATTACTCTTTTCCTTTTTTCTTGTAACCGGCAGGGCGGCACGCTGCCGGA GGATCTGGGGCAGCGCGTCAGCCTGCTGCTGCTCGAAGAAGTGCGGCGCG GCGGCTGCGTCGACTCGTCGCACCAGGCGCTGGCGCTGCTGCTCATGGTG CTGTGCCCCGAGGACGTCAGCCGCCTGCGGGTGGGGCGCCTGACGCAATA CAGCGTGCGCGTGCTGCGGCTGCTGCGCGACTTCTTCGGTGTCACATTTC GGATCAAGCCCGACCACGACTCATCCACGGTGGGTTTGGGTTGCCGCCAG ACTCTGACAGTCGTTCAGATTTTGAACTCTGCCAGTCTTTTGATTCCGCC GGACGCCGCCGTCGTGCGGCCGCTGCTGTCGTTGCGTCTGTGCGCTAGGA AAGCCCCTGCGTATTCTGAAGGCTCTGCAACGTGTAGAGGAGGGGGCTTG TTGCTTTGTTCTGGTTTCCTCGGGCCTCACATCTAGTACTCATGGATAGC GCAAGGAGAGGACAGCGTTCAAACCTGATTTACCTCGTCAGACGTGTTGA ACATCACTGATTTTCTAGGCCGCTGGACTTGAGGCGGACGCAACGCATTC TCTCATCGCCTCCGCCCGCCTTCTTCACTGCTGCAGGTGATGATGTCTTG CTTGGGCATCGGGTACAAGAACCTGGCGCGTGGTGCCACATAGAGAATGT CCTTCCGTCTAATGAAAATGCAGAACGCCAAAACCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5934:503..3440+

>mRNA_P-wetherbeei_contig5934.1.1 ID=mRNA_P-wetherbeei_contig5934.1.1|Name=mRNA_P-wetherbeei_contig5934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig5934:503..3440+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCGGCGGATCCGCGGCAATGCCTACTGTGCCAAGGTCTCGCCGCA
GCTCGCCAACCGCGTGGCAGAGTCCTCTCGAGGGCCGCTGAACCGGCTGC
TGCCGGACGTGTGGGTCCACACGGAGCACTGCGCGGGGCTAAAGGCGGGG
AAGTCGCCGGGATTTGCGCTGACACTGGTGGCGGAGTCCACTAGCGGCAC
ACTGCTCATGGCTGAGGGCGCGGCGGCGCAGGGCGGCACGCTGCCGGAGG
ATCTGGGGCAGCGCGTCAGCCTGCTGCTGCTCGAAGAAGTGCGGCGCGGC
GGCTGCGTCGACTCGTCGCACCAGGCGCTGGCGCTGCTGCTCATGGTGCT
GTGCCCCGAGGACGTCAGCCGCCTGCGGGTGGGGCGCCTGACGCAATACA
GCGTGCGCGTGCTGCGGCTGCTGCGCGACTTCTTCGGTGTCACATTTCGG
ATCAAGCCCGACCACGACTCATCCACGGTGATGATGTCTTGCTTGGGCAT
CGGGTACAAGAACCTGGCGCGTGGTGCCACATAG
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