prot_P-wetherbeei_contig5927.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5927.1.1
Unique Nameprot_P-wetherbeei_contig5927.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length52
Homology
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: W7TK49_9STRA (6-4 photolyase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK49_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.810e-20
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    3 VSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRYR 52
            VS+HWFRKGLRLHDNPALLEAC GA  V+PVF++DPHFA P+ +GV RYR
Sbjct:   49 VSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYR 98          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A0A7S0CRC1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CRC1_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 2.540e-20
Identity = 32/49 (65.31%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    3 VSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRY 51
            V++HWFRKGLR+HDNPAL++AC+GA  ++P+F++DP+FA P+ VGVNRY
Sbjct:   21 VAIHWFRKGLRIHDNPALMDACKGALLMYPLFILDPYFAKPDFVGVNRY 69          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A0A482S988_9ARCH (Deoxyribodipyrimidine photo-lyase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S988_9ARCH)

HSP 1 Score: 85.5 bits (210), Expect = 1.100e-19
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    3 VSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRY 51
            VS+HWFRKGLRLHDNPALL AC  ++ ++PVF +DPHFA P+ VGVNR+
Sbjct:    8 VSLHWFRKGLRLHDNPALLRACEHSDHLYPVFCLDPHFAHPQHVGVNRF 56          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A9V4B6_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V4B6_MONBE)

HSP 1 Score: 87.0 bits (214), Expect = 9.670e-19
Identity = 38/49 (77.55%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    3 VSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRY 51
            +S+HWFRKG RLHDNPAL  A RGA QV+PVFVIDPHFA PE VGV RY
Sbjct:    6 ISLHWFRKGQRLHDNPALWRALRGATQVYPVFVIDPHFAKPENVGVLRY 54          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: F2U6L6_SALR5 (DNA photolyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6L6_SALR5)

HSP 1 Score: 87.0 bits (214), Expect = 1.030e-18
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    3 VSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRY 51
            VS+HWFRKGLRLHDN ALL A +GA+QV+PVFV+DPHFA PE VGV RY
Sbjct:    6 VSIHWFRKGLRLHDNAALLAALKGAKQVYPVFVLDPHFAKPEFVGVVRY 54          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: UPI001E1DA7CB (cryptochrome-1-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA7CB)

HSP 1 Score: 86.3 bits (212), Expect = 1.950e-18
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    4 SVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRYR 52
            S+HWFRKGLRLHDNPALLEAC+ A  V+PVFV+DP FA   RVGVNR+R
Sbjct:   39 SIHWFRKGLRLHDNPALLEACKNASHVWPVFVMDPWFAETARVGVNRWR 87          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A0A8B6DFN4_MYTGA (Photolyase/cryptochrome alpha/beta domain-containing protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DFN4_MYTGA)

HSP 1 Score: 81.6 bits (200), Expect = 2.090e-18
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    4 SVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRYR 52
            S+HWFRKGLRLHDNPALL AC  A  V P+F++DP FAS  RVGVNR+R
Sbjct:   18 SIHWFRKGLRLHDNPALLAACENAVDVKPIFILDPWFASNARVGVNRWR 66          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A0A6J8B2G7_MYTCO (CRY n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B2G7_MYTCO)

HSP 1 Score: 81.6 bits (200), Expect = 6.470e-18
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    4 SVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRYR 52
            S+HWFRKGLRLHDNPALL AC  A  V P+F++DP FAS  RVGVNR+R
Sbjct:   13 SIHWFRKGLRLHDNPALLAACENAVDVKPIFILDPWFASNARVGVNRWR 61          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A0A835Z8B1_9STRA (DNA photolyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.680e-18
Identity = 34/51 (66.67%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 MVVSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRY 51
            M  ++HWFRKGLRLHDNPALL+A + A+QV+PVF++DPHFA+P +VG  RY
Sbjct:    1 MTTAIHWFRKGLRLHDNPALLQAAKEAQQVYPVFMLDPHFANPAKVGQLRY 51          
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Match: A0A0G4EYQ6_VITBC (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EYQ6_VITBC)

HSP 1 Score: 84.0 bits (206), Expect = 1.260e-17
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    4 SVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNRYR 52
            +V WFRKGLRLHDN ALLEAC+ A  V+PVF+IDPHF  P +VGVNRYR
Sbjct:    5 AVLWFRKGLRLHDNLALLEACKDATHVYPVFIIDPHFVGPGKVGVNRYR 53          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5927.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TK49_9STRA1.810e-2076.006-4 photolyase n=3 Tax=Monodopsidaceae TaxID=42507... [more]
A0A7S0CRC1_9EUKA2.540e-2065.31Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A482S988_9ARCH1.100e-1969.39Deoxyribodipyrimidine photo-lyase (Fragment) n=1 T... [more]
A9V4B6_MONBE9.670e-1977.55Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
F2U6L6_SALR51.030e-1877.55DNA photolyase n=1 Tax=Salpingoeca rosetta (strain... [more]
UPI001E1DA7CB1.950e-1875.51cryptochrome-1-like isoform X1 n=2 Tax=Mercenaria ... [more]
A0A8B6DFN4_MYTGA2.090e-1871.43Photolyase/cryptochrome alpha/beta domain-containi... [more]
A0A6J8B2G7_MYTCO6.470e-1871.43CRY n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A... [more]
A0A835Z8B1_9STRA6.680e-1866.67DNA photolyase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A0G4EYQ6_VITBC1.260e-1773.47Photolyase/cryptochrome alpha/beta domain-containi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 4..50
e-value: 1.1E-15
score: 58.0
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 2..52
score: 19.005449
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 1..52
e-value: 6.3E-17
score: 63.6
IPR002081Cryptochrome/DNA photolyase class 1PANTHERPTHR11455CRYPTOCHROMEcoord: 3..52
NoneNo IPR availablePANTHERPTHR11455:SF10CRYPTOCHROME CIRCADIAN REGULATOR 1BA-RELATEDcoord: 3..52
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 4..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5927contigP-wetherbeei_contig5927:612..948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5927.1.1mRNA_P-wetherbeei_contig5927.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5927 612..948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5927.1.1 ID=prot_P-wetherbeei_contig5927.1.1|Name=mRNA_P-wetherbeei_contig5927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp
MVVSVHWFRKGLRLHDNPALLEACRGAEQVFPVFVIDPHFASPERVGVNR
YR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006050DNA_photolyase_N
IPR014729Rossmann-like_a/b/a_fold
IPR002081Cryptochrome/DNA_photolyase_1
IPR036155Crypto/Photolyase_N_sf