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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1158 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 903 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185858.9142914-CDS-P-wetherbeei_contig10206:81..628 | 1683185858.9142914-CDS-P-wetherbeei_contig10206:81..628 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig10206 82..628 + |
| 1683185858.9229946-CDS-P-wetherbeei_contig10206:861..1089 | 1683185858.9229946-CDS-P-wetherbeei_contig10206:861..1089 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig10206 862..1089 + |
| 1683185858.9313087-CDS-P-wetherbeei_contig10206:1297..1365 | 1683185858.9313087-CDS-P-wetherbeei_contig10206:1297..1365 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig10206 1298..1365 + |
| 1683185858.9396935-CDS-P-wetherbeei_contig10206:1578..1638 | 1683185858.9396935-CDS-P-wetherbeei_contig10206:1578..1638 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig10206 1579..1638 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185858.9479795-UTR-P-wetherbeei_contig10206:1638..1891 | 1683185858.9479795-UTR-P-wetherbeei_contig10206:1638..1891 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig10206 1639..1891 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10206.1.2 >prot_P-wetherbeei_contig10206.1.2 ID=prot_P-wetherbeei_contig10206.1.2|Name=mRNA_P-wetherbeei_contig10206.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp
AAADAFIAVCERPAKDTTSTAVALRLPRGERQLVASVLPEPNLCAAVRRF
RSADCRHSLILHRLAGRIARLCPATACAPLPGLWLDAIGESSPHFSNKHS
LSCVPSCTPSSLFIFSFPFSLFVLFFRRICPQAKPQDDFAALGNQLRSTV
ALLKAPSTLLSTEGFSKTRTVVDSVTLDIKYFGPSPAPTPAPTAAPSIDP
SKPGAGGLNPKDKPQKATSESKGGMSTAGKYAALAAAGLAGITVVYCCLG
SALRNRKSVAADKEKEQARRKEDDEIFRRAQAANAAKLALANESTAVPLS
* back to topmRNA from alignment at P-wetherbeei_contig10206:82..1891+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig10206.1.2 ID=mRNA_P-wetherbeei_contig10206.1.2|Name=mRNA_P-wetherbeei_contig10206.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1810bp|location=Sequence derived from alignment at P-wetherbeei_contig10206:82..1891+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGCAGCTGACGCGTTTATCGCTGTCTGTGAACGCCCAGCAAAAGACAC
CACAAGCACAGCAGTCGCGCTACGACTTCCTCGAGGTGAGCGTCAACTTG
TTGCTTCTGTGCTTCCTGAACCGAATTTGTGCGCGGCGGTGCGGAGATTC
CGGTCTGCTGATTGCCGGCACTCTCTTATCTTGCATCGATTGGCTGGCAG
AATTGCGCGGCTTTGCCCGGCGACCGCTTGTGCTCCTTTACCGGGGCTTT
GGTTGGATGCGATAGGAGAAAGCTCTCCCCACTTTTCAAACAAGCATTCG
CTTTCCTGCGTCCCCTCGTGTACCCCCTCCTCTCTTTTTATTTTCTCTTT
TCCCTTTTCTCTCTTCGTGCTTTTCTTTCGCCGCATCTGCCCGCAGGCGA
AGCCGCAGGACGATTTCGCGGCGCTGGGCAACCAACTGCGGTCAACCGTG
GCGCTTCTCAAGGCGCCTTCGACCCTGCTGTCGACAGAAGGCTTCTCCAA
GACGCGCACAGTGGTGGACAGCGTGACGCTCGACATCAAGTACTTCGGTG
AGTGTCACTGCGGGTGTTGTCTCCGCCATGTTGCTGAATCTAACTGTGCG
CTGTTTTTCGCATCCATTTGGGCCTTTAGGTTTGTTTTGGTGGGGTTAAG
GAGGTGGACGGGGAGGCGGCGCTCTTTGCTCTGGCTTTTGTGACAGAGGC
AGATGTCACGTGCGCCACCGCATAACTTCCTTGATGCTCTACCCGTTTTC
CTTCCCTCGCTCCCTTCCCTTCCCTCGCAGGCCCTTCCCCCGCACCGACG
CCGGCGCCGACGGCTGCGCCATCTATCGACCCCTCCAAGCCGGGCGCCGG
CGGCCTCAACCCGAAGGACAAGCCGCAGAAAGCAACCTCTGAGAGCAAGG
GTGGCATGAGCACGGCCGGGAAATATGCGGCGCTGGCCGCGGCGGGCCTC
GCGGGCATCACCGTGGTGTACTGCTGCCTCGGGAGCGCCCTCCGCAACCG
CAAGAGCGGTGAGACTTGCCGTCCGTGGGAAAGGGAGAACCGGATGTATG
GACAAACCTCCTTCGTTTCTCATTTCTGTTGCGATTTTTGAGGTTTTTAC
ATCACTGTTTGCAACCCTTTATGTCGCGGCCACTTTGGACGACCCCCTCG
TCTGATTTTGGAACTGCTTTCAACCCGCTATGTGTTCCCCTCGCTCACCG
TGGACCGCGTCGGCAGTGGCCGCGGACAAGGAGAAGGAGCAGGCGCGGCG
GAAGGAGGACGACGAGATCTTCCGCCGGGCTCAGGTGAGCTGCAGGTTGG
GCTTCCGCAGAGTCTGCATGAAGCAGATAAAGGCGTAATTACCTCGGCTT
GCAGAGGGTTCAATTAAGGCTCGAGTTTGGTTGGCGCGCTTTGCAGAAAC
CGTTTTGAATATGAGAATCAGAACATGTTCCAGGCGCTTTATCTTCCATT
CCCTTCCGTTCTTCACCACGAACGCATCTCTCTTTGACGGGCGGCAGGCT
GCGAACGCCGCCAAGCTGGCGCTTGCGAATGAGTCCACTGCTGTCCCGCT
ATCGTGACCCGAAGGTTCGGTCGCTTCTGCGGCAGCGGATCGGGTGGGGT
CCATGGTCGTCGGACGGCCGATGATCGTCTTTCTTTTCTGCGCTGTGGGT
TGGTTGTTGGTGCCTGTGTAGGAGGAGGAGAACATGCTGGCTGAAGCCGC
TGCTACGTTCTTGTGCGATGCCCGTCAGACAGCGTGTGGGTGACAGCAAG
TGGAGGAGGAATGTGATACCGTTTACTTAATTCAATGTACTTCTTGAGGT
ACGGCTGTGA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig10206:82..1891+ >mRNA_P-wetherbeei_contig10206.1.2 ID=mRNA_P-wetherbeei_contig10206.1.2|Name=mRNA_P-wetherbeei_contig10206.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig10206:82..1891+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGCAGCTGACGCGTTTATCGCTGTCTGTGAACGCCCAGCAAAAGACAC
CACAAGCACAGCAGTCGCGCTACGACTTCCTCGAGGTGAGCGTCAACTTG
TTGCTTCTGTGCTTCCTGAACCGAATTTGTGCGCGGCGGTGCGGAGATTC
CGGTCTGCTGATTGCCGGCACTCTCTTATCTTGCATCGATTGGCTGGCAG
AATTGCGCGGCTTTGCCCGGCGACCGCTTGTGCTCCTTTACCGGGGCTTT
GGTTGGATGCGATAGGAGAAAGCTCTCCCCACTTTTCAAACAAGCATTCG
CTTTCCTGCGTCCCCTCGTGTACCCCCTCCTCTCTTTTTATTTTCTCTTT
TCCCTTTTCTCTCTTCGTGCTTTTCTTTCGCCGCATCTGCCCGCAGGCGA
AGCCGCAGGACGATTTCGCGGCGCTGGGCAACCAACTGCGGTCAACCGTG
GCGCTTCTCAAGGCGCCTTCGACCCTGCTGTCGACAGAAGGCTTCTCCAA
GACGCGCACAGTGGTGGACAGCGTGACGCTCGACATCAAGTACTTCGGCC
CTTCCCCCGCACCGACGCCGGCGCCGACGGCTGCGCCATCTATCGACCCC
TCCAAGCCGGGCGCCGGCGGCCTCAACCCGAAGGACAAGCCGCAGAAAGC
AACCTCTGAGAGCAAGGGTGGCATGAGCACGGCCGGGAAATATGCGGCGC
TGGCCGCGGCGGGCCTCGCGGGCATCACCGTGGTGTACTGCTGCCTCGGG
AGCGCCCTCCGCAACCGCAAGAGCGTGGCCGCGGACAAGGAGAAGGAGCA
GGCGCGGCGGAAGGAGGACGACGAGATCTTCCGCCGGGCTCAGGCTGCGA
ACGCCGCCAAGCTGGCGCTTGCGAATGAGTCCACTGCTGTCCCGCTATCG
TGA back to top
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