mRNA_P-wetherbeei_contig5925.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A543PP74_9MICO (von Willebrand factor type A domain-containing protein n=1 Tax=Humibacillus xanthopallidus TaxID=412689 RepID=A0A543PP74_9MICO) HSP 1 Score: 85.9 bits (211), Expect = 5.020e-14 Identity = 73/239 (30.54%), Postives = 117/239 (48.95%), Query Frame = 1
Query: 49 MSAKATATPLEVKLSACEVTHVQWTFNGSMVIERDSET----LDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDGAENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGL-PERYFQVDQLEALDEVLVDKLVTVIEMP 750
M+ A+A P+ ++ + T ++ ++ +S T D++LV+DESGSI+ F GQ K FA A+V+ + N LF NGGR G V FS +E ++G+ + A +GG T + G++EA+T++ A D +Q+++VITDG DP A EV+AVGVGD + + + I G + F V +L L+ LV+ + +P
Sbjct: 33 MAPLASAAPVPSASASPTTVNRYGTSTVTLTLDGESSTQSTPTDLVLVLDESGSIDSTEF---GQL----KSFADAVVEAVG-NDGLFANGGRVGVVGFST-----GAEVVSPLSGNETDVRNAIAANPQSGGSTCMSCGLNEASTVMGA--DDPARNQLVIVITDGNATSG-DPTASAAANLQAKAEVFAVGVGDGISQSTLETIASGPGADNTFSVGGFSSL-ATLLSALVSAVVVP 254
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A846PHW1_9ARCH (VWA domain-containing protein n=1 Tax=Candidatus Aenigmarchaeota archaeon TaxID=2093792 RepID=A0A846PHW1_9ARCH) HSP 1 Score: 79.0 bits (193), Expect = 2.050e-12 Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = 1
Query: 142 IERDSE---TLDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDGAENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGLPERYFQVDQLEALDEVLVD 723
IE+ E ++D++LV D SGS+ G + KD AK + ++D + R+G F++ D G+T T +DA+ A G TGIG GIDEA T L+ D ++ ++++DG EN+ +DP+G+A A + GI +Y +G+G D + +I +Y+ L+E+ D
Sbjct: 60 IEKQYEAQVSVDVMLVNDISGSM-------GGTKLQAAKDAAKYFIMIMDNTTD------RSGLATFNNTAYLD-----QGLTFENATVAIAIDAM-IAQGMTGIGFGIDEANTELIN-NDRIDAIKVEILLSDGKENQVSDPLGKADQADAYGISIYTIGLGGDADHDLLEDIANNTDGKYYFAPSESQLEEIYED 236
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A1G2G5Y2_9BACT (VWFA domain-containing protein n=1 Tax=Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 TaxID=1802115 RepID=A0A1G2G5Y2_9BACT) HSP 1 Score: 76.3 bits (186), Expect = 3.670e-11 Identity = 57/188 (30.32%), Postives = 86/188 (45.74%), Query Frame = 1
Query: 163 LDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDGAENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLN---ITGGLPERYFQVDQLEALDEVL 717
LDI+LVMD SGSI+ Y K+ AKA V L ++N G V F+ + D +T +D L GG T + GID A L++ D +M+++TDGA N D + A A++ G ++YAVG+G V +A L+ ++ + YF L+ +L
Sbjct: 274 LDIVLVMDNSGSIDSTE-------YTAMKNAAKAFVDALLLSLN----GPHGAKVSFASSATLDQM-----LTDDPTVLKTAID-LAQTGGSTNLSAGIDVAQAELVSPRDRADAPNLMIILTDGAPNSQADAITSANAAKAAGSQIYAVGIGTNVSTSAFLHDQIVSDVENDHYFDAANFSDLETIL 444
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A1D3DZF4_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces thermolilacinus SPC6 TaxID=1306406 RepID=A0A1D3DZF4_9ACTN) HSP 1 Score: 75.5 bits (184), Expect = 9.990e-11 Identity = 78/240 (32.50%), Postives = 110/240 (45.83%), Query Frame = 1
Query: 61 ATATPLEVKLSACEVTHVQWTFNGSMVIERDSETLDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDGAENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGL-PERYFQVDQLEALDEVLVDKLVTVIEMPCSSGGALAL 777
A+A+P V V+ V T +G S D++LV+DESGSI F GQ DFA ++V + + LF NGGR G V FS T+ D S S R T T I G+D A L D +Q+++VITDG N DP A A V+AVGVGD V A + + G + F V + L ++L +KLV + +P ++ ++A+
Sbjct: 35 ASASPTTVPRYG--VSTVTLTLDGES--STQSTPTDLVLVLDESGSINDTEF---GQL----TDFADSVVAAVADD-GLFANGGRVGVVGFSQ-TAQDVSPLSADEGAVRSAIVNN----TQMRSSTCISCGLDRAGVQLGP--DDPLRNQVVIVITDGNANPG-DPTASAAAALQGKATVFAVGVGDGVSQATLETVASGPGSDNTFTVGSFDDLADLL-EKLVEAVSVPGATHPSIAV 253
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: UPI001BEB4492 (VWA domain-containing protein n=1 Tax=Streptomyces sp. ISL-10 TaxID=2819172 RepID=UPI001BEB4492) HSP 1 Score: 72.8 bits (177), Expect = 7.130e-10 Identity = 75/243 (30.86%), Postives = 121/243 (49.79%), Query Frame = 1
Query: 154 SETLDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDG-AENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGL-PERYFQVDQLEALDEVLVDKLVTVIEMPCSSGGALAL------RVTAGAVSNAIVSAGAVAYNKSTGFLW 858
S D++LV+DESGSI+ + GQ KDFAK++V + + LF +GGR G V F++ + S ++G ++ ++ T I G+ EA +L A D +Q++VVITDG A + NT A+ A++ V+AVGVG + A + I G E F V LD L+ K+V + +P ++ ++ + ++ AG V+ A ++ AV + GF W
Sbjct: 62 STPTDLVLVLDESGSIDATEW---GQL----KDFAKSVVNGVAAH-GLFTHGGRVGVVGFANSAAPPVSA----LSGDKDAVLNAIETNPKQDTGTCIACGLAEANAVLGA--DDPARNQLVVVITDGEATSGNTAAEAAALQAKAN---VFAVGVGGGIQQATLDVIASGPGSENTFSVGDFGGLD-TLLKKIVEAVVVPGATHPSIVVTLDSPWQLVAGTVT-ANLAGSAVNNVTADGFTW 285
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A543HG75_9MICO (von Willebrand factor type A domain-containing protein n=1 Tax=Humibacillus xanthopallidus TaxID=412689 RepID=A0A543HG75_9MICO) HSP 1 Score: 71.2 bits (173), Expect = 2.210e-9 Identity = 68/245 (27.76%), Postives = 113/245 (46.12%), Query Frame = 1
Query: 61 ATATPLEVKLSACEVTHVQWTFNGSMVIERDSETLDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDGAENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGLPE-RYFQVDQLEALDEVLVDKLVTVIEMPCSSGGALALRVTAG 792
ATA+P V V T +G S D++LV+DESGSI+ F FA ++V + + LF NGGR G V FS T + ++ ++ + + + T I G+++A+ + M V+D +Q+++VITDG + DP A + EV+AVGVGD + + + I G + F V +L L+ LV + +P ++ ++ + + AG
Sbjct: 45 ATASPTSVARYGTST--VTLTLDGES--STQSTPTDLVLVLDESGSIDATEF-------NQLNTFASSVVTAVAAD-GLFANGGRVGVVGFSSGAET-----VIPLSNNQAAVASAISSNPQSALSTCISCGLNQASAV-MGVDD-PARNQLVIVITDG-NADGGDPTAAAATSLQAKAEVFAVGVGDGISQSTLETIASGAGDANTFAVGGFGSL-AALLSTLVAAVVVPGATNPSVTVTLDAG 268
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: UPI001600741D (uncharacterized protein LOC118432772 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001600741D) HSP 1 Score: 70.9 bits (172), Expect = 4.650e-9 Identity = 55/183 (30.05%), Postives = 87/183 (47.54%), Query Frame = 1
Query: 166 DIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVE--DHKTHHQIMVVITDG-AENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGLPERYFQVDQLEAL 705
D++ ++D SGSI F ++ K F K ++ RN + R G +++SD T +E M +R+ VD + Y G T G ++ + + I++V+TDG +E+ T V AI +GI +YAVGVG+ VD A++L +TGG+ R QV L
Sbjct: 698 DLVFLLDGSGSIGTDNF-------QLVKAFTKEVI----RNFAISPTATRVGLLQYSD---TIDNEFFMNEFNTRDELYTAVDNVVYKTGGTFTGFAVEFTRQIAFRTSAGTRDNYPDILIVVTDGNSEDVVTSAVASAI---DQGILIYAVGVGNNVDFASLLELTGGVNSRVLQVSDFTGL 863
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A8J9YT76_BRALA (COL6A3 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YT76_BRALA) HSP 1 Score: 70.1 bits (170), Expect = 8.050e-9 Identity = 53/183 (28.96%), Postives = 86/183 (46.99%), Query Frame = 1
Query: 166 DIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVE--DHKTHHQIMVVITDGAENEN-TDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGLPERYFQVDQLEAL 705
D++ ++D SGSI F ++ K F K ++ RN + R G +++SD T +E + +R+ + VD + Y G T G ++ + + I++V+TDG ++ T V AI +GI +YAVGVG+ VD A +L +TGG+ R QV L
Sbjct: 690 DLVFLLDGSGSIGTDNF-------QLVKAFTKEVI----RNFAVSPTETRVGLLQYSDTTD---NEFFLNQFDTRDELNTAVDNVVYKTGGTFTGFAVEFTRQIAFRTSAGTRDNYPDILLVVTDGNSQDSVTSAVASAI---DQGILIYAVGVGNNVDFATLLELTGGVNSRVLQVSDFTGL 855
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: A0A8J9YT82_BRALA (COL6A3 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YT82_BRALA) HSP 1 Score: 70.1 bits (170), Expect = 8.100e-9 Identity = 53/183 (28.96%), Postives = 86/183 (46.99%), Query Frame = 1
Query: 166 DIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVE--DHKTHHQIMVVITDGAENEN-TDPVGRAIFARSRGIEVYAVGVGDAVDAAAMLNITGGLPERYFQVDQLEAL 705
D++ ++D SGSI F ++ K F K ++ RN + R G +++SD T +E + +R+ + VD + Y G T G ++ + + I++V+TDG ++ T V AI +GI +YAVGVG+ VD A +L +TGG+ R QV L
Sbjct: 698 DLVFLLDGSGSIGTDNF-------QLVKAFTKEVI----RNFAVSPTETRVGLLQYSDTTD---NEFFLNQFDTRDELNTAVDNVVYKTGGTFTGFAVEFTRQIAFRTSAGTRDNYPDILLVVTDGNSQDSVTSAVASAI---DQGILIYAVGVGNNVDFATLLELTGGVNSRVLQVSDFTGL 863
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Match: UPI001EB06C9D (SCO-spondin-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB06C9D) HSP 1 Score: 69.7 bits (169), Expect = 9.960e-9 Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 1
Query: 142 IERDSETLDIILVMDESGSIEFPRFCPQGQCYEMEKDFAKAIVKLLDRNVNLFGNGGRAGFVEFSDITSTDPSEHSMGVTGSRETFDRRVDALTYAGGRTGIGTGIDEATTLLMAVEDHKTHHQIMVVITDGAENENTDPVGRAIFARSRGIEVYAVGVGDAVDAAAML 648
I D+ LV+D S S++ F K ++K + N RAG V FSD ++ P ++ + R++DAL Y G T GID+A +L+ +D + +IM+V+TDGA + + A A+ GI ++AVG+ + V ++A L
Sbjct: 166 IANDAIAFTACLVIDGSESVQEANFL-----------IMKNLMKSYISRTSTANNQSRAGVVVFSDSVTSIP------ISANLSALTRQIDALAYPGQGTSTHLGIDQARQMLL--QDSTLNPKIMIVVTDGASDNEVETRTAAQRAKDAGITIFAVGITEFVSSSATL 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5925.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5925.1.1 >prot_P-wetherbeei_contig5925.1.1 ID=prot_P-wetherbeei_contig5925.1.1|Name=mRNA_P-wetherbeei_contig5925.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=503bp LSAFFFINTILAMQQCMSAKATATPLEVKLSACEVTHVQWTFNGSMVIERback to top mRNA from alignment at P-wetherbeei_contig5925:3..2626+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5925.1.1 ID=mRNA_P-wetherbeei_contig5925.1.1|Name=mRNA_P-wetherbeei_contig5925.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2624bp|location=Sequence derived from alignment at P-wetherbeei_contig5925:3..2626+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5925:3..2626+ >mRNA_P-wetherbeei_contig5925.1.1 ID=mRNA_P-wetherbeei_contig5925.1.1|Name=mRNA_P-wetherbeei_contig5925.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1509bp|location=Sequence derived from alignment at P-wetherbeei_contig5925:3..2626+ (Phaeothamnion wetherbeei SAG_119_79)back to top |