mRNA_P-wetherbeei_contig59204.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59204.1.1
Unique NamemRNA_P-wetherbeei_contig59204.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: A0A522GKZ2_9BURK (Hydantoinase B/oxoprolinase family protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A522GKZ2_9BURK)

HSP 1 Score: 277 bits (708), Expect = 1.060e-88
Identity = 130/166 (78.31%), Postives = 146/166 (87.95%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLAAAGG+LH  F  +L   DV+ITNDPW+SAGHFFDITLL PI    RLIGY+GSTIHHTDIGGYGIGAGARD+HEEGLWIPPLKFF AGVP+  +HDIIR NVRTPDHVFGDLAAQV+SG +GGE+L++MC RYGL DIE+LSD I+RRSEE+TR
Sbjct:   55 NTGTPGHINSLAAAGGYLHTRFKDQLEEGDVIITNDPWISAGHFFDITLLQPIMNKGRLIGYIGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKFFAAGVPDKAIHDIIRSNVRTPDHVFGDLAAQVASGKSGGEQLLSMCNRYGLNDIEQLSDEIIRRSEESTR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: A0A0P6VJH9_9HYPH (Hydantoinase B n=2 Tax=Prosthecomicrobium hirschii TaxID=665126 RepID=A0A0P6VJH9_9HYPH)

HSP 1 Score: 275 bits (702), Expect = 1.020e-87
Identity = 132/166 (79.52%), Postives = 143/166 (86.14%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL  +F GK+ P DV+ITNDPWLSAGHFFDIT LTPIF G  +IG+VGSTIHHTDIGGYGIGAGARD+HEEGLWIPPLK ++ GVPNA LHDIIRRNVRTPD VFGDLAAQVS+G    E LVA+CER+GL DIE LSD ILRRSEEATR
Sbjct:   62 NTGTPGHINSLAFAGKHLAGLFTGKVEPGDVLITNDPWLSAGHFFDITTLTPIFNGAAVIGWVGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKLYERGVPNAVLHDIIRRNVRTPDAVFGDLAAQVSAGRTASEHLVALCERHGLADIEGLSDEILRRSEEATR 227          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: A0A085FWN6_9HYPH (Hydantoin utilization protein B n=16 Tax=Hyphomicrobiales TaxID=356 RepID=A0A085FWN6_9HYPH)

HSP 1 Score: 274 bits (701), Expect = 1.220e-87
Identity = 128/166 (77.11%), Postives = 144/166 (86.75%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL R+F G+  P DV+ITNDPWLSAGHFFDIT+LTPIF GT+L+ Y+GSTIHHTDIGGYGIGAGARD+HEEGLWIPPLK ++ G P+  LHDIIRRNVRTPD VFGDL+AQVSSG A  E L+A+CERYG+EDIE LSD I+ RSEEATR
Sbjct:   55 NTGTPGHINSLAIAGAHLVRLFEGRCEPGDVLITNDPWLSAGHFFDITILTPIFDGTKLLAYIGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKLYERGKPSEMLHDIIRRNVRTPDAVFGDLSAQVSSGEAAAEHLIALCERYGIEDIEALSDEIIDRSEEATR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: A0A8I0GNZ2_9SPHN (Hydantoinase B/oxoprolinase family protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A8I0GNZ2_9SPHN)

HSP 1 Score: 271 bits (694), Expect = 1.650e-86
Identity = 126/166 (75.90%), Postives = 146/166 (87.95%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSL+AAG  L ++F GKL P DV+ITNDPW+SAGHFFDIT+L+PIF+  +LIGY+GSTIHHTDIGGYGIGAGARD+HEEGLWIPP K ++AG P+  LHDII+ NVRTPDHVFGDLAAQVSSG  GGERL+A+CER G+EDIE L+D I+ RSEEATR
Sbjct:   55 NTGTPGHINSLSAAGFTLAKLFDGKLVPGDVIITNDPWMSAGHFFDITVLSPIFRSDKLIGYIGSTIHHTDIGGYGIGAGARDVHEEGLWIPPSKLYEAGEPSTLLHDIIKHNVRTPDHVFGDLAAQVSSGRGGGERLIALCERQGIEDIEALADEIISRSEEATR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: UPI001CA62CA0 (hydantoinase B/oxoprolinase family protein n=1 Tax=Sphingomonas colocasiae TaxID=1848973 RepID=UPI001CA62CA0)

HSP 1 Score: 271 bits (693), Expect = 1.850e-86
Identity = 130/166 (78.31%), Postives = 146/166 (87.95%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLAAAG  L  +FA +L P DV+ITNDPWLSAGHFFDIT+LTPIF   RLIG+VGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLK +++G PN  LHDIIRRNVRTPDHV GDLAAQ+SSG AGGERL+A+CER GL+DIE+L++ I+ RSE ATR
Sbjct:   55 NTGTPGHINSLAAAGKTLADMFANRLVPGDVLITNDPWLSAGHFFDITVLTPIFWDDRLIGFVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKLYESGEPNPVLHDIIRRNVRTPDHVLGDLAAQISSGRAGGERLIALCERAGLDDIEDLAEEIISRSEAATR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: A0A1H4MFQ8_9HYPH (N-methylhydantoinase B n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4MFQ8_9HYPH)

HSP 1 Score: 269 bits (688), Expect = 1.090e-85
Identity = 126/166 (75.90%), Postives = 143/166 (86.14%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL ++F GK  P DV+ITNDPWLSAGHFFDITLLTPI+ GT++I Y+GSTIHHTDIGGYGIGAGARD+HEEGLWIPPLKF++ GVPN  LH +I RNVRTPD VFGDLAAQVSSG A  + L+A+C R+GL+DIE LSD I+ RSEEATR
Sbjct:   55 NTGTPGHINSLAFAGAHLVKLFEGKCEPGDVLITNDPWLSAGHFFDITLLTPIYDGTKIIAYIGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKFYERGVPNPVLHAMIGRNVRTPDAVFGDLAAQVSSGHAAADHLIALCRRHGLDDIETLSDEIIARSEEATR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: UPI0014395B69 (hydantoinase B/oxoprolinase family protein n=1 Tax=Solimonas marina TaxID=2714601 RepID=UPI0014395B69)

HSP 1 Score: 268 bits (686), Expect = 2.360e-85
Identity = 128/166 (77.11%), Postives = 141/166 (84.94%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL  +F GK  P DV+ITNDPWLSAGHFFDIT+LTPIF+G RLI YVGSTIHHTDIGGYGIGAGARD+HEEGLWIPPLKF++ G PN TLH II+RNVRTPD VFGD +AQVSSG A    LVA+CERYG +DIE +SDAI+ RSEEA R
Sbjct:   56 NTGTPGHINSLAIAGRHLIGMFEGKCEPGDVLITNDPWLSAGHFFDITILTPIFRGERLIAYVGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKFYERGQPNRTLHTIIQRNVRTPDAVFGDFSAQVSSGQAAASHLVALCERYGHDDIEAMSDAIIERSEEAMR 221          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: UPI001669E215 (hydantoinase B/oxoprolinase family protein n=1 Tax=Novosphingobium endophyticum TaxID=1955250 RepID=UPI001669E215)

HSP 1 Score: 268 bits (685), Expect = 2.850e-85
Identity = 124/166 (74.70%), Postives = 142/166 (85.54%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL  +F GK  P D++ITNDPWLSAGHFFDIT+LTPIF+  +L+ Y+GSTIHHTDIGGYGIGAGARD+HEEGLWIPPLKF++ G PN TLH IIR+NVRTPD VFGD +AQVSSG A  + L+A+CERYGLEDIE LSD ++RRSEEA R
Sbjct:   55 NTGTPGHINSLAIAGKHLVSLFDGKCEPGDILITNDPWLSAGHFFDITILTPIFRDAKLLAYIGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKFYEKGKPNETLHAIIRQNVRTPDAVFGDFSAQVSSGQAAADHLIALCERYGLEDIEALSDEVIRRSEEAMR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: A0A2U1W687_9PROT (Hydantoinase B n=4 Tax=Azospirillum TaxID=191 RepID=A0A2U1W687_9PROT)

HSP 1 Score: 266 bits (681), Expect = 1.200e-84
Identity = 127/166 (76.51%), Postives = 141/166 (84.94%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL + FAG+  P DV+ITNDPWLSAGHFFDIT LTPIFKG  LI Y+GSTIHHTDIGGYG+GAGARD+HEEGLWIPPLK ++ GVPN  LH II RNVRTPD VFGDLAAQVSSG A  E L+A+CER+GLED+E LSD I+ RSEE+TR
Sbjct:   55 NTGTPGHINSLAFAGAHLVKEFAGRCEPGDVLITNDPWLSAGHFFDITTLTPIFKGDILIAYLGSTIHHTDIGGYGVGAGARDVHEEGLWIPPLKLYERGVPNPVLHAIIGRNVRTPDAVFGDLAAQVSSGQAAAEHLIALCERHGLEDLEGLSDEIINRSEESTR 220          
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Match: UPI0015D4D58B (hydantoinase B/oxoprolinase family protein n=2 Tax=Azospirillum TaxID=191 RepID=UPI0015D4D58B)

HSP 1 Score: 266 bits (680), Expect = 1.690e-84
Identity = 126/166 (75.90%), Postives = 141/166 (84.94%), Query Frame = 1
Query:    1 NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLLTPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAGVPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDIEELSDAILRRSEEATR 498
            NTGTPGHINSLA AG HL R FAG+ +P DV+ITNDPWLSAGHFFDIT LTPIF G RLI Y+GSTIHHTDIGGYGIGAGARD+HEEGLWIPPLK ++ G PN  LH +IRRNVRTPD VFGDLAAQVSSG +  E L+A+C R+GL+DIE LSD I+ RSE+ATR
Sbjct:   55 NTGTPGHINSLAFAGAHLVREFAGRCDPGDVLITNDPWLSAGHFFDITTLTPIFNGDRLIAYIGSTIHHTDIGGYGIGAGARDVHEEGLWIPPLKLYERGTPNPVLHAMIRRNVRTPDAVFGDLAAQVSSGRSAAEHLIALCARHGLDDIEALSDEIIDRSEDATR 220          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59204.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A522GKZ2_9BURK1.060e-8878.31Hydantoinase B/oxoprolinase family protein n=2 Tax... [more]
A0A0P6VJH9_9HYPH1.020e-8779.52Hydantoinase B n=2 Tax=Prosthecomicrobium hirschii... [more]
A0A085FWN6_9HYPH1.220e-8777.11Hydantoin utilization protein B n=16 Tax=Hyphomicr... [more]
A0A8I0GNZ2_9SPHN1.650e-8675.90Hydantoinase B/oxoprolinase family protein n=2 Tax... [more]
UPI001CA62CA01.850e-8678.31hydantoinase B/oxoprolinase family protein n=1 Tax... [more]
A0A1H4MFQ8_9HYPH1.090e-8575.90N-methylhydantoinase B n=2 Tax=Hyphomicrobiales Ta... [more]
UPI0014395B692.360e-8577.11hydantoinase B/oxoprolinase family protein n=1 Tax... [more]
UPI001669E2152.850e-8574.70hydantoinase B/oxoprolinase family protein n=1 Tax... [more]
A0A2U1W687_9PROT1.200e-8476.51Hydantoinase B n=4 Tax=Azospirillum TaxID=191 RepI... [more]
UPI0015D4D58B1.690e-8475.90hydantoinase B/oxoprolinase family protein n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59204contigP-wetherbeei_contig59204:3..500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1502851.FG93_00021
PFAMsHydantoinase_B
Model size498
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.01e-88
EggNOG OGsCOG0146@1|root,COG0146@2|Bacteria,1QU46@1224|Proteobacteria,2TVYU@28211|Alphaproteobacteria,3JUF2@41294|Bradyrhizobiaceae
DescriptionHydantoinase B/oxoprolinase
Cds size498
COG categoryEQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186875.2191103-CDS-P-wetherbeei_contig59204:2..5001683186875.2191103-CDS-P-wetherbeei_contig59204:2..500Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59204 3..500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59204.1.1prot_P-wetherbeei_contig59204.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59204 3..500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59204.1.1

>prot_P-wetherbeei_contig59204.1.1 ID=prot_P-wetherbeei_contig59204.1.1|Name=mRNA_P-wetherbeei_contig59204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
NTGTPGHINSLAAAGGHLHRIFAGKLNPRDVVITNDPWLSAGHFFDITLL
TPIFKGTRLIGYVGSTIHHTDIGGYGIGAGARDIHEEGLWIPPLKFFDAG
VPNATLHDIIRRNVRTPDHVFGDLAAQVSSGAAGGERLVAMCERYGLEDI
EELSDAILRRSEEATR
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mRNA from alignment at P-wetherbeei_contig59204:3..500+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59204.1.1 ID=mRNA_P-wetherbeei_contig59204.1.1|Name=mRNA_P-wetherbeei_contig59204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59204:3..500+ (Phaeothamnion wetherbeei SAG_119_79)
AACACCGGCACCCCGGGGCACATCAACTCGCTGGCGGCCGCCGGCGGGCA CCTGCACCGCATTTTCGCGGGCAAGCTCAACCCTCGCGATGTGGTCATCA CCAACGACCCTTGGTTATCAGCCGGGCATTTTTTCGACATCACGCTGCTC ACGCCGATTTTCAAAGGCACGCGCCTGATCGGCTACGTGGGCTCGACCAT CCACCACACCGACATCGGCGGCTACGGCATCGGCGCCGGCGCGCGCGACA TCCACGAGGAAGGCCTGTGGATCCCGCCGCTCAAGTTCTTCGATGCAGGC GTGCCCAACGCCACGCTGCACGACATCATCCGCCGCAATGTGCGCACCCC CGACCATGTGTTTGGCGACCTCGCCGCGCAGGTGTCGTCCGGCGCGGCCG GCGGCGAGCGCCTGGTGGCGATGTGCGAGCGCTACGGGCTGGAAGACATC GAGGAACTATCGGATGCGATCCTCCGCCGCTCCGAGGAAGCCACGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59204:3..500+

>mRNA_P-wetherbeei_contig59204.1.1 ID=mRNA_P-wetherbeei_contig59204.1.1|Name=mRNA_P-wetherbeei_contig59204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59204:3..500+ (Phaeothamnion wetherbeei SAG_119_79)
AACACCGGCACCCCGGGGCACATCAACTCGCTGGCGGCCGCCGGCGGGCA
CCTGCACCGCATTTTCGCGGGCAAGCTCAACCCTCGCGATGTGGTCATCA
CCAACGACCCTTGGTTATCAGCCGGGCATTTTTTCGACATCACGCTGCTC
ACGCCGATTTTCAAAGGCACGCGCCTGATCGGCTACGTGGGCTCGACCAT
CCACCACACCGACATCGGCGGCTACGGCATCGGCGCCGGCGCGCGCGACA
TCCACGAGGAAGGCCTGTGGATCCCGCCGCTCAAGTTCTTCGATGCAGGC
GTGCCCAACGCCACGCTGCACGACATCATCCGCCGCAATGTGCGCACCCC
CGACCATGTGTTTGGCGACCTCGCCGCGCAGGTGTCGTCCGGCGCGGCCG
GCGGCGAGCGCCTGGTGGCGATGTGCGAGCGCTACGGGCTGGAAGACATC
GAGGAACTATCGGATGCGATCCTCCGCCGCTCCGAGGAAGCCACGCGC
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