mRNA_P-wetherbeei_contig59201.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59201.1.1
Unique NamemRNA_P-wetherbeei_contig59201.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: A0A518HDB1_9BACT (Uncharacterized protein n=1 Tax=Tautonia plasticadhaerens TaxID=2527974 RepID=A0A518HDB1_9BACT)

HSP 1 Score: 174 bits (441), Expect = 4.650e-53
Identity = 77/100 (77.00%), Postives = 90/100 (90.00%), Query Frame = 1
Query:   22 TPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            +PS DLL FA DRRF+T+LADPPWRF NRTGK+APEHRRLSRYGT+T++EIAALPVS++ D  AHLYLWVPNALLPEGL V+ AWGF YK+N+VWHK+RK
Sbjct:    3 SPSTDLLAFAADRRFRTVLADPPWRFQNRTGKVAPEHRRLSRYGTMTLDEIAALPVSRVVDEPAHLYLWVPNALLPEGLAVLSAWGFRYKANLVWHKVRK 102          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: A0A0H5BFV8_BLAVI (MT-A70 family protein n=1 Tax=Blastochloris viridis TaxID=1079 RepID=A0A0H5BFV8_BLAVI)

HSP 1 Score: 174 bits (440), Expect = 5.670e-53
Identity = 81/105 (77.14%), Postives = 94/105 (89.52%), Query Frame = 1
Query:   10 PDSD-TPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            PD++ +P+ADL+RFAD R F T+LADPPW+F+NRTGKIAPEHRRLSRYGTL++ EI ALPV+ I   TAHLYLWVPNALLPEGL+VMRAWGF YK+NIVWHKLRK
Sbjct:    5 PDTECSPAADLVRFADGRAFATVLADPPWQFVNRTGKIAPEHRRLSRYGTLSLAEIMALPVADIVRPTAHLYLWVPNALLPEGLEVMRAWGFAYKANIVWHKLRK 109          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: D3NX81_AZOS1 (Type II DNA modification methyltransferase n=27 Tax=Azospirillum TaxID=191 RepID=D3NX81_AZOS1)

HSP 1 Score: 173 bits (438), Expect = 1.370e-52
Identity = 75/99 (75.76%), Postives = 90/99 (90.91%), Query Frame = 1
Query:   25 PSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            P+ DL+ FA DRRF T++ADPPWRF+NRTGK+APEHRRLSRYGT+TVE+I ALPV+ I+  TAHLYLWVPNALLPEGLQVMR+WGF YK+N++WHK+RK
Sbjct:   13 PARDLVAFAGDRRFATVMADPPWRFVNRTGKMAPEHRRLSRYGTMTVEDICALPVADIAAPTAHLYLWVPNALLPEGLQVMRSWGFEYKTNLIWHKVRK 111          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: A0A7C2LXQ2_9HYPH (S-adenosylmethionine-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LXQ2_9HYPH)

HSP 1 Score: 172 bits (435), Expect = 3.900e-52
Identity = 82/106 (77.36%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    4 RRPDSDTPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            R  D   P ADLL F + RRF TILADPPWRF NRTGK+APEHRRLSRYGTLT+EEIA LPV  I+  TAHLYLWVPNALLPEGL VM AWGF+YKSNIVWHK+RK
Sbjct:    4 RNDDLPDPVADLLAFVEGRRFATILADPPWRFTNRTGKMAPEHRRLSRYGTLTLEEIANLPVKAIAADTAHLYLWVPNALLPEGLSVMSAWGFSYKSNIVWHKVRK 109          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: A0A4S1FN58_9HYPH (S-adenosylmethionine-binding protein n=1 Tax=Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 TaxID=2563947 RepID=A0A4S1FN58_9HYPH)

HSP 1 Score: 171 bits (433), Expect = 5.460e-52
Identity = 75/99 (75.76%), Postives = 89/99 (89.90%), Query Frame = 1
Query:   25 PSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            PSADLL+ AD +RFKTILADPPW+F+NRTGK+APEHRRL+RYGT+ + EI ALPV Q+S  TAHLYLWVPNALLP+GLQVM +WGF YKSN++WHK+RK
Sbjct:    4 PSADLLKTADGKRFKTILADPPWQFVNRTGKVAPEHRRLTRYGTMGLSEIKALPVDQVSADTAHLYLWVPNALLPDGLQVMESWGFTYKSNLIWHKIRK 102          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: A0A432MDL5_9BACT (S-adenosylmethionine-binding protein n=1 Tax=Tautonia sociabilis TaxID=2080755 RepID=A0A432MDL5_9BACT)

HSP 1 Score: 171 bits (433), Expect = 5.630e-52
Identity = 75/100 (75.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query:   22 TPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            TP+ADLL FA DRRF+TILADPPWRF NRTGK+APEHRRLSRYGT++++EIA LPVS+I++  AHLYLWVPNALLP+GL V+ +WGF YK+N+VWHK+RK
Sbjct:    3 TPTADLLAFAGDRRFRTILADPPWRFQNRTGKVAPEHRRLSRYGTMSLDEIAELPVSRIAEEPAHLYLWVPNALLPDGLAVLASWGFRYKANLVWHKVRK 102          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: UPI00036ACB43 (MT-A70 family methyltransferase n=1 Tax=Novispirillum itersonii TaxID=189 RepID=UPI00036ACB43)

HSP 1 Score: 171 bits (432), Expect = 1.080e-51
Identity = 75/107 (70.09%), Postives = 93/107 (86.92%), Query Frame = 1
Query:    1 MRRPDSDTPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            M   D +  + DLL+FA ++R+ TILADPPWRF NRTGK+APEHRRL+RYGT+++EEI +LPVS I+D T+HLY+WVPNALLPEGLQV++AWGF YK+NIVWHKLRK
Sbjct:    1 MHDADMNQAAQDLLKFAGNKRYSTILADPPWRFENRTGKMAPEHRRLARYGTMSIEEICSLPVSDIADTTSHLYMWVPNALLPEGLQVLKAWGFTYKTNIVWHKLRK 107          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: UPI001FEB3BB1 (MT-A70 family methyltransferase n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001FEB3BB1)

HSP 1 Score: 171 bits (432), Expect = 1.290e-51
Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 1
Query:   25 PSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            P  DL  FA DRRF T++ADPPWRF+NRTGK+APEHRRLSRYGT+TVEEI ALPV+ I   TAHLYLWVPNALLPEGLQVM+AWGF YK+NIVWHK+RK
Sbjct:   18 PVQDLADFAKDRRFATVMADPPWRFVNRTGKMAPEHRRLSRYGTMTVEEICALPVAGIVAPTAHLYLWVPNALLPEGLQVMQAWGFEYKTNIVWHKVRK 116          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: A0A1M7Z9H1_9HYPH (N6-adenosine-specific RNA methylase IME4 n=2 Tax=Pseudoxanthobacter TaxID=433838 RepID=A0A1M7Z9H1_9HYPH)

HSP 1 Score: 171 bits (433), Expect = 2.440e-51
Identity = 75/101 (74.26%), Postives = 90/101 (89.11%), Query Frame = 1
Query:   19 DTPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            ++P  DLLRFA  RRF T++ADPPW+F+NRTGK+APEHRRLSRYGTL++ EIA LPV+ ++  TAHLYLWVPNALLPEGLQV++AWGF YKSNIVWHK+RK
Sbjct:   50 ESPGQDLLRFAAGRRFATVMADPPWQFVNRTGKVAPEHRRLSRYGTLSLPEIAGLPVADVAAPTAHLYLWVPNALLPEGLQVLKAWGFTYKSNIVWHKVRK 150          
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Match: UPI0015D517E3 (MT-A70 family methyltransferase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D517E3)

HSP 1 Score: 170 bits (430), Expect = 3.280e-51
Identity = 76/103 (73.79%), Postives = 88/103 (85.44%), Query Frame = 1
Query:   13 DSDTPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRYGTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNIVWHKLRK 321
            D   P  DLLRFA DRRF T+LADPPWRF NRTGK+APEHRRLSRYGT++ +EIAALPVS +   TAHLYLWVPNALLP+G++V+ AWGF YK+N+VWHKLRK
Sbjct:    7 DDANPGQDLLRFAGDRRFATVLADPPWRFANRTGKMAPEHRRLSRYGTMSEDEIAALPVSSLVAETAHLYLWVPNALLPDGVRVLEAWGFTYKTNLVWHKLRK 109          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59201.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518HDB1_9BACT4.650e-5377.00Uncharacterized protein n=1 Tax=Tautonia plasticad... [more]
A0A0H5BFV8_BLAVI5.670e-5377.14MT-A70 family protein n=1 Tax=Blastochloris viridi... [more]
D3NX81_AZOS11.370e-5275.76Type II DNA modification methyltransferase n=27 Ta... [more]
A0A7C2LXQ2_9HYPH3.900e-5277.36S-adenosylmethionine-binding protein n=1 Tax=Hypho... [more]
A0A4S1FN58_9HYPH5.460e-5275.76S-adenosylmethionine-binding protein n=1 Tax=Mesor... [more]
A0A432MDL5_9BACT5.630e-5275.00S-adenosylmethionine-binding protein n=1 Tax=Tauto... [more]
UPI00036ACB431.080e-5170.09MT-A70 family methyltransferase n=1 Tax=Novispiril... [more]
UPI001FEB3BB11.290e-5178.79MT-A70 family methyltransferase n=1 Tax=Azospirill... [more]
A0A1M7Z9H1_9HYPH2.440e-5174.26N6-adenosine-specific RNA methylase IME4 n=2 Tax=P... [more]
UPI0015D517E33.280e-5173.79MT-A70 family methyltransferase n=1 Tax=Azospirill... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59201contigP-wetherbeei_contig59201:1..321 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog359.CN09_19425
PFAMsMT-A70
Model size321
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.56e-50
EggNOG OGsCOG4725@1|root,COG4725@2|Bacteria,1R553@1224|Proteobacteria,2TRP6@28211|Alphaproteobacteria,4BGSK@82115|Rhizobiaceae
DescriptionBelongs to the MT-A70-like family
Cds size321
COG categoryKT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186875.1898153-CDS-P-wetherbeei_contig59201:0..3211683186875.1898153-CDS-P-wetherbeei_contig59201:0..321Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59201 1..321 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59201.1.1prot_P-wetherbeei_contig59201.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59201 1..321 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59201.1.1

>prot_P-wetherbeei_contig59201.1.1 ID=prot_P-wetherbeei_contig59201.1.1|Name=mRNA_P-wetherbeei_contig59201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp
MRRPDSDTPSADLLRFADDRRFKTILADPPWRFLNRTGKIAPEHRRLSRY
GTLTVEEIAALPVSQISDATAHLYLWVPNALLPEGLQVMRAWGFNYKSNI
VWHKLRK
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mRNA from alignment at P-wetherbeei_contig59201:1..321-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59201.1.1 ID=mRNA_P-wetherbeei_contig59201.1.1|Name=mRNA_P-wetherbeei_contig59201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig59201:1..321- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCGTCCCGACAGTGATACCCCCTCTGCCGATTTATTGCGCTTTGC CGATGATCGCCGGTTCAAGACAATTTTGGCTGATCCACCATGGCGGTTTC TCAATCGGACGGGAAAGATCGCCCCTGAGCATCGGCGGCTATCGCGGTAT GGCACCCTGACCGTAGAAGAAATTGCAGCCCTTCCCGTTTCTCAGATCTC TGACGCGACTGCACATTTGTATTTGTGGGTGCCGAACGCTCTGCTGCCTG AAGGCCTTCAAGTCATGCGAGCTTGGGGATTCAACTACAAAAGCAATATC GTCTGGCACAAGTTACGCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59201:1..321-

>mRNA_P-wetherbeei_contig59201.1.1 ID=mRNA_P-wetherbeei_contig59201.1.1|Name=mRNA_P-wetherbeei_contig59201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig59201:1..321- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCGTCCCGACAGTGATACCCCCTCTGCCGATTTATTGCGCTTTGC
CGATGATCGCCGGTTCAAGACAATTTTGGCTGATCCACCATGGCGGTTTC
TCAATCGGACGGGAAAGATCGCCCCTGAGCATCGGCGGCTATCGCGGTAT
GGCACCCTGACCGTAGAAGAAATTGCAGCCCTTCCCGTTTCTCAGATCTC
TGACGCGACTGCACATTTGTATTTGTGGGTGCCGAACGCTCTGCTGCCTG
AAGGCCTTCAAGTCATGCGAGCTTGGGGATTCAACTACAAAAGCAATATC
GTCTGGCACAAGTTACGCAAG
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