prot_P-wetherbeei_contig59157.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59157.1.1
Unique Nameprot_P-wetherbeei_contig59157.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length166
Homology
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A2E2JBB5_9GAMM (TetR family transcriptional regulator n=1 Tax=Polycyclovorans sp. TaxID=2024852 RepID=A0A2E2JBB5_9GAMM)

HSP 1 Score: 280 bits (715), Expect = 1.620e-93
Identity = 145/166 (87.35%), Postives = 152/166 (91.57%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTRGRVLEIFHAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDSALP 166
            GTARAGHADVARLA VSVATVFEYFPTRE LLDAVLR+IEQFLYAV+A+G TAAD R RVL+IFHAFQ CVD QPQHMRVWLDWSTS+RE VW HYVEVQERII MFEQMIEAGR AGSI  AVI+GDAARILVGQAHMIVMMRFA VDQA+VVRFIDHMIDSALP
Sbjct:   58 GTARAGHADVARLAAVSVATVFEYFPTRERLLDAVLREIEQFLYAVMAVGATAADVRSRVLDIFHAFQACVDAQPQHMRVWLDWSTSVREGVWLHYVEVQERIIDMFEQMIEAGRTAGSICPAVISGDAARILVGQAHMIVMMRFASVDQASVVRFIDHMIDSALP 223          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A3C0TVW7_9PROT (TetR/AcrR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVW7_9PROT)

HSP 1 Score: 127 bits (320), Expect = 8.170e-34
Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVA-LGTTAADTRGRVLEIFHAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDSAL 165
            G  RA HA++AR A VSVATVF YFPTRE+L+  +L ++ + L A++  L          +  +  AF    +     +RVWL+WSTS+R+D+WP Y+  QE+++   + +I  G+  G I + V   DAARI+VG AHM+V+M FAH     +  F+ H+I+S L
Sbjct:   46 GIGRASHAEIAREAGVSVATVFNYFPTREILVLQILEEVAKNLTALLENLDQKNVTAPQALYNLMRAFADATETHTDMVRVWLEWSTSVRDDIWPKYLVFQEKVVNRLQDLIVRGQRQGQIPADVDPRDAARIIVGDAHMVVLMHFAHQAARDMDGFLRHLIESVL 211          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A317EGT2_9PROT (HTH tetR-type domain-containing protein n=2 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317EGT2_9PROT)

HSP 1 Score: 115 bits (287), Expect = 8.550e-29
Identity = 64/164 (39.02%), Postives = 93/164 (56.71%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTRGRVLEIF-HAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDS 163
            G ARA HA VA  A VSV  V  YF TRE L+   L ++E+ L A++A    A  +    L I    F     D P  +++WLDWST  R DVWP Y+++QER+  +    +E GR +G +S+ +  G  A++ VG  H + + RFA  +++ + R IDH+I S
Sbjct:   48 GIARATHAHVAERAGVSVPAVHSYFRTREDLVAETLVEVEKHLLAILADPRIAEVSAREALTIMVRGFDKAAQDDPDVVKIWLDWSTGFRADVWPRYLQMQERLYAIVRGALERGRRSGELSAGLDPGAGAQLFVGGGHTVALFRFAGGEESAIDRLIDHLIQS 211          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A1N7IZ07_9GAMM (Transcriptional regulator, TetR family n=5 Tax=Oceanospirillales TaxID=135619 RepID=A0A1N7IZ07_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 8.450e-27
Identity = 60/150 (40.00%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTRGRVLEIF-HAFQGCVD---DQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFA 146
            G  RAGH ++A+ A VSVATVF YF TRE L+D VL ++E +L   + L  +A D  G   E+  H     +      P + ++WL+WS+S+RED WP Y++ Q +++ + E  IE     G ++  + A D AR  +G AHM+VMM F+
Sbjct:   32 GIGRAGHTEIAQRAGVSVATVFNYFNTREALVDEVLDEVENYL---INLSVSAVDKPGSAAEVLDHCITTIIHACKTYPDYFKIWLEWSSSVREDTWPRYLKFQSQMMSLIETQIENAVNDGRLAPGLPAHDRARWALGNAHMLVMMVFS 178          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: UPI0004002A36 (TetR/AcrR family transcriptional regulator n=1 Tax=Oceanobacter kriegii TaxID=64972 RepID=UPI0004002A36)

HSP 1 Score: 105 bits (263), Expect = 1.390e-25
Identity = 54/147 (36.73%), Postives = 83/147 (56.46%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVV--ALGTTAADTRGRVLEIFHAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRF 145
            G  R GH D+A L  VSVATVF YF TRE L++ VL ++ QF+  +   +          R+   FH F    ++ P +++VWL+WS S RE+VWP Y+ +Q  ++ M  + ++AG   G +   + A + AR L+G + M+  M F
Sbjct:   22 GIGRGGHTDIAELGGVSVATVFNYFKTREALVNDVLAEVAQFMLNIAQSSFENQELSPLARIRLYFHRFLRSCEETPDYIKVWLEWSASPREEVWPQYLSLQSELLAMLTEQLQAGIDNGELKGGLPADERARWLLGNSQMLTGMMF 168          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A7Y3GWX0_9DELT (TetR/AcrR family transcriptional regulator n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GWX0_9DELT)

HSP 1 Score: 106 bits (264), Expect = 1.690e-25
Identity = 60/166 (36.14%), Postives = 96/166 (57.83%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTR-GRVLEIFHAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDSAL 165
            G   A HA++A  A V+V TVF YF  RE L+  VL D++++L  +V       +T   ++L +  AF   V+  P  M++WL+WST++R++VWP Y ++Q R+I  F ++I  G+  G +  AV    AA ++VG  HMI  M+F     A V  +++ ++  AL
Sbjct:   40 GIGAARHAEIAAEAGVAVPTVFAYFQNREALVHEVLSDVDRYLSDMVWTAAGEGETVFEKLLSVVRAFAERVESDPDRMKIWLNWSTAMRDEVWPLYEDLQRRVIVHFVELIRTGQKQGEVEPAVNPEVAAYMVVGGGHMIAQMKFTGRAPADVEEYLETLVLGAL 205          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A2D6BLD8_9DELT (HTH tetR-type domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BLD8_9DELT)

HSP 1 Score: 105 bits (263), Expect = 2.500e-25
Identity = 59/167 (35.33%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFL--YAVVALGTTAADTRGRVLEIFHAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDSAL 165
            G  RA HA++A+ A V+V+TVF YF TR  L+  VL +++QF    +V          R  + E   AF   +D  P H+R+WLDWSTS RE+ +  +++  ER++G++   I  G++ G + + + A  +AR+LVG A M+  ++  H    T +R  D ++++AL
Sbjct:   45 GLGRARHAEIAKRAGVAVSTVFLYFTTRRDLVRTVLDEVDQFFSELSVRVHAQVGKPCREVLREHGAAFLASIDSHPAHVRIWLDWSTSFREETFEGFLDFTERLVGVYADTIRRGQSEGEVPAHLDAEASARLLVGAAQMVAQLKLTHRGDDTWLRSADALVEAAL 211          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A3B8XWX5_9HYPH (TetR/AcrR family transcriptional regulator n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3B8XWX5_9HYPH)

HSP 1 Score: 105 bits (261), Expect = 4.300e-25
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTRGRVLEIFHA-FQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDSAL 165
            G ARA H+ VA  A VSV  V  YF TR+ L+ AVL ++E +L  +V+       +    L      F     ++P  M+VWLDWST +R DVWP Y++V ER+  + ++++E G+  G I S + A  AAR+ +G  H + +M+F+   +      +DH++ +A+
Sbjct:   35 GVARATHSHVAERAGVSVPAVHSYFRTRDDLVAAVLSEVEAYLLEIVSSSLGGKKSVPEALRALAVNFSRDARNKPDMMKVWLDWSTGVRADVWPRYMDVLERLHDIAQKLLERGKREGVIPSGLNAKAAARVYLGGGHTVALMQFSGAGRGEFDAVVDHLVRNAM 200          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A2G2PVF8_9RHOB (TetR family transcriptional regulator n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2G2PVF8_9RHOB)

HSP 1 Score: 104 bits (260), Expect = 5.000e-25
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTRGRVLEIF-HAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRF 145
            G  R GH ++A +  VSVATVF YF TRE L++AVL ++E FL  +        D     + +   AF    ++ P +++VWL+WS S+RE++WP Y+E Q +++ +  + I+ G   G +   +   + AR  +G A M+V M F
Sbjct:   32 GIGRGGHTEIAEIGGVSVATVFNYFKTREALVEAVLEEVESFLLNLAEAVYAEEDNPLEAIRLHVKAFLNACEENPDYIKVWLEWSASVREEIWPQYLEFQNKLLDLIAKQIDKGIKKGILEQGLAPKERARWALGNAQMLVSMVF 177          
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Match: A0A2N3E0Q5_9PROT (HTH tetR-type domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E0Q5_9PROT)

HSP 1 Score: 104 bits (260), Expect = 5.370e-25
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 0
Query:    1 GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALGTTAADTRGRVLEIFHA-FQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQATVVRFIDHMIDSAL 165
            G ARA H+ VA  A VSV  V  YF TR+ L+ AVL ++E +L  +V+            LE     F      +P  ++VWLDWST +R DVWP Y++V +R+ G+ E+++E G+  G IS A+    AAR+ +G  H + +M+F+    +     IDH++ +A+
Sbjct:   28 GVARATHSHVAERAGVSVPAVHSYFRTRDDLVAAVLGEVETYLIEIVSRSLGGPKLVHEALEALAVNFSLDAKAKPDMIKVWLDWSTGVRADVWPRYMDVLDRLHGIAEKVLERGKREGVISPALNVKAAARVYLGGGHTVALMQFSGARPSEFDAVIDHLVRAAM 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59157.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2JBB5_9GAMM1.620e-9387.35TetR family transcriptional regulator n=1 Tax=Poly... [more]
A0A3C0TVW7_9PROT8.170e-3440.96TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A317EGT2_9PROT8.550e-2939.02HTH tetR-type domain-containing protein n=2 Tax=Za... [more]
A0A1N7IZ07_9GAMM8.450e-2740.00Transcriptional regulator, TetR family n=5 Tax=Oce... [more]
UPI0004002A361.390e-2536.73TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A7Y3GWX0_9DELT1.690e-2536.14TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A2D6BLD8_9DELT2.500e-2535.33HTH tetR-type domain-containing protein n=1 Tax=De... [more]
A0A3B8XWX5_9HYPH4.300e-2535.54TetR/AcrR family transcriptional regulator n=2 Tax... [more]
A0A2G2PVF8_9RHOB5.000e-2535.62TetR family transcriptional regulator n=2 Tax=Prot... [more]
A0A2N3E0Q5_9PROT5.370e-2536.75HTH tetR-type domain-containing protein (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.357.10Tetracycline Repressor, domain 2coord: 1..165
e-value: 3.5E-32
score: 114.1
IPR001647DNA-binding HTH domain, TetR-typePROSITEPS50977HTH_TETR_2coord: 1..43
score: 13.792648
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..50
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilySUPERFAMILY48498Tetracyclin repressor-like, C-terminal domaincoord: 57..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59157contigP-wetherbeei_contig59157:2..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59157.1.1mRNA_P-wetherbeei_contig59157.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59157 2..499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59157.1.1 ID=prot_P-wetherbeei_contig59157.1.1|Name=mRNA_P-wetherbeei_contig59157.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
GTARAGHADVARLAPVSVATVFEYFPTRELLLDAVLRDIEQFLYAVVALG
TTAADTRGRVLEIFHAFQGCVDDQPQHMRVWLDWSTSIREDVWPHYVEVQ
ERIIGMFEQMIEAGRAAGSISSAVIAGDAARILVGQAHMIVMMRFAHVDQ
ATVVRFIDHMIDSALP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001647HTH_TetR
IPR009057Homeobox-like_sf
IPR036271Tet_transcr_reg_TetR-rel_C_sf