mRNA_P-wetherbeei_contig5914.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5914.2.1
Unique NamemRNA_P-wetherbeei_contig5914.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A2Z6QEN3_9GLOM (Pre-mRNA-splicing factor n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A2Z6QEN3_9GLOM)

HSP 1 Score: 243 bits (621), Expect = 7.510e-72
Identity = 116/147 (78.91%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLV 441
            QNLGEAEYVVA YQYMRLLGYP D+I ILTTYNGQKALIRDVL QRC+ NP LFG P++VTTVDK+QGQQNDY+LLSLVRT+ VGH+RDVRRLIVAMSRARLGLYVFCR+++FE+CYEL PTF++LL+RP +LQL +NE WPS+R+V
Sbjct: 1227 QNLGEAEYVVAVYQYMRLLGYPEDKITILTTYNGQKALIRDVLSQRCSWNP-LFGRPAKVTTVDKFQGQQNDYILLSLVRTKTVGHIRDVRRLIVAMSRARLGLYVFCRRSIFENCYELAPTFNKLLERPDKLQLKINEMWPSSRMV 1372
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A433DNN2_9FUNG (AAA domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DNN2_9FUNG)

HSP 1 Score: 239 bits (609), Expect = 6.600e-71
Identity = 114/148 (77.03%), Postives = 133/148 (89.86%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLVG 444
            QNLGEAEY+VA YQYMRL+GYPA++I ILTTYNGQKALIRDVL +RCA NP  FG P++VTTVDKYQGQQNDY+LLSLVRT++VGH+RDVRRLIVAMSRARLGLYVFCR+ALFE+CYEL PTF++L+ RP +LQL + E WP+ R VG
Sbjct:  668 QNLGEAEYIVAVYQYMRLIGYPAEKITILTTYNGQKALIRDVLNRRCAWNP-FFGRPAKVTTVDKYQGQQNDYILLSLVRTKSVGHIRDVRRLIVAMSRARLGLYVFCRRALFENCYELMPTFNKLVARPDKLQLKIGEMWPATREVG 814
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A397TM25_9GLOM (Pre-mRNA-splicing factor n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TM25_9GLOM)

HSP 1 Score: 239 bits (611), Expect = 1.660e-70
Identity = 114/147 (77.55%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLV 441
            QNLGEAEY+VA YQYMRLLGYP D+I ILTTYNGQKALIRDVL QRC+ NP LFG P++VTTVDK+QGQQNDY+LLSLVRT+ VGH+RDVRRLIVAMSRARLGLYVFCR+++F +CYEL PTF++LL+RP +LQL +NE WPS+R V
Sbjct: 1226 QNLGEAEYIVAVYQYMRLLGYPEDKITILTTYNGQKALIRDVLSQRCSWNP-LFGRPAKVTTVDKFQGQQNDYILLSLVRTKTVGHIRDVRRLIVAMSRARLGLYVFCRRSIFSNCYELAPTFNKLLERPDKLQLKINEMWPSSRKV 1371
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A397TXW6_9GLOM (Pre-mRNA-splicing factor n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TXW6_9GLOM)

HSP 1 Score: 236 bits (603), Expect = 1.960e-69
Identity = 114/148 (77.03%), Postives = 134/148 (90.54%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLVG 444
            QNLGEAE++VA YQYMRLLGY +D+I+ILTTYNGQKALIRDVL+QRC+ NP LFG P++VTTVDK+QGQQNDY+LLSLVRT++VGH+RDVRRLIVAMSRARLGLYVFCR ALF++CYELTPTF +LL+RP +L L +NE WPS R V 
Sbjct: 1214 QNLGEAEFIVAVYQYMRLLGYSSDKISILTTYNGQKALIRDVLKQRCSWNP-LFGRPAKVTTVDKFQGQQNDYILLSLVRTKSVGHIRDVRRLIVAMSRARLGLYVFCRLALFKNCYELTPTFDELLKRPTKLNLKINEMWPSKRDVN 1360
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A433QX11_9FUNG (Pre-mRNA-splicing factor n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QX11_9FUNG)

HSP 1 Score: 235 bits (600), Expect = 4.880e-69
Identity = 112/145 (77.24%), Postives = 131/145 (90.34%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSAR 435
            QNLGEAEY+VA YQYMRL+GYPA++I ILTTYNGQKALIRDVL +RCA NP  FG P++VTTVDKYQGQQNDY+LLSLVRT++VGH+RDVRRLIVAMSRARLGLYVFCR+ALFE+CYEL PTF++L+ RP +LQL + E WP+ R
Sbjct: 1154 QNLGEAEYIVAVYQYMRLIGYPAEKITILTTYNGQKALIRDVLNRRCAWNP-FFGRPAKVTTVDKYQGQQNDYILLSLVRTKSVGHIRDVRRLIVAMSRARLGLYVFCRRALFENCYELMPTFNKLVARPDKLQLKIGEMWPATR 1297
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A397HW18_9GLOM (Pre-mRNA-splicing factor n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HW18_9GLOM)

HSP 1 Score: 235 bits (599), Expect = 6.910e-69
Identity = 114/145 (78.62%), Postives = 131/145 (90.34%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSAR 435
            QNLGEAEY+VA YQYMRLLGYP+++I+ILTTYNGQKALIRDVL+QRC+ NP LFG P++VTTVDKYQGQQNDY+LLSLVRT+ VGH+RDVRRLIVAMSRARLGLYVFCR ALF++CYELT TF +LL+RP  L L +NE WPS R
Sbjct: 1217 QNLGEAEYIVAVYQYMRLLGYPSEKISILTTYNGQKALIRDVLRQRCSWNP-LFGQPAKVTTVDKYQGQQNDYILLSLVRTRNVGHIRDVRRLIVAMSRARLGLYVFCRLALFKNCYELTSTFDRLLERPTELSLRINEMWPSDR 1360
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A2P2IBV2_9CRUS (Intron-binding protein aquarius-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IBV2_9CRUS)

HSP 1 Score: 222 bits (566), Expect = 9.360e-69
Identity = 103/147 (70.07%), Postives = 131/147 (89.12%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLV 441
            QNLGEAE++V TY +MRL+GYP+++I+I+TTYNGQK L+RD++++RC  NP LFG P+++TTVDKYQGQQNDY+LLSLVRT+ VGHLRDVRRL+VA+SRARLGLYVFCRQ LFE+CYELTP+FS+LL RP +L ++ NE +PS R V
Sbjct:  265 QNLGEAEFIVQTYMFMRLVGYPSEKISIITTYNGQKQLLRDIIRRRCENNP-LFGEPAKITTVDKYQGQQNDYILLSLVRTKTVGHLRDVRRLVVALSRARLGLYVFCRQRLFENCYELTPSFSRLLTRPTKLHIVPNEMFPSERPV 410
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: UPI0001CB97FF (intron-binding protein aquarius-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB97FF)

HSP 1 Score: 219 bits (558), Expect = 1.290e-68
Identity = 107/147 (72.79%), Postives = 128/147 (87.07%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLV 441
            QNL EAEYVVA + +MRL+GYPAD+I+ILTTYNGQK LIRDV+ QRC  NP L G PS+VTTVD++QGQQNDY+LLSLVRT+AVGHLRDVRRL+VAMSRARLGLYVF R +LF++CYEL+PTF+QL+QRP +L +  NE +P AR V
Sbjct:  120 QNLAEAEYVVALFMFMRLIGYPADKISILTTYNGQKHLIRDVINQRCGNNP-LIGRPSKVTTVDRFQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYVFARVSLFQNCYELSPTFNQLMQRPLQLHIAPNEIYPPARKV 265
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: UPI000529D425 (intron-binding protein aquarius-like n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529D425)

HSP 1 Score: 214 bits (545), Expect = 1.520e-67
Identity = 105/147 (71.43%), Postives = 125/147 (85.03%), Query Frame = 1 
Query:    4 NLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLVG 444
            NLGEAEYVVA + YM LLGYPAD+I+ILTTYNGQK LIRDV+ QRC  NP L G P++VTTVD++QGQQNDY+LLSLVRT+AVGHLRDVRRL+VAMSRARLGLY+F R +LF++C+ELTP FSQL  RP  L ++  E +P+ARL G
Sbjct:    1 NLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDVINQRCGNNP-LIGRPNKVTTVDRFQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTERFPTARLNG 146
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BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Match: A0A5N4E4K7_CAMDR (RNA helicase aquarius n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4E4K7_CAMDR)

HSP 1 Score: 215 bits (548), Expect = 1.590e-67
Identity = 103/148 (69.59%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:    1 QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAANPALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRARLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLVG 444
            QNLGEAEYVVA + YM LLGYPAD+I+ILTTYNGQK LIRD++ +RC +NP L G P++VTTVD++QGQQNDY+LLSLVRT+AVGHLRDVRRL+VAMSRARLGLY+F R +LF++C+ELTP FSQL  RP  L ++  EP+P++R  G
Sbjct:    5 QNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNP-LIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNG 151
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5914.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2Z6QEN3_9GLOM7.510e-7278.91Pre-mRNA-splicing factor n=8 Tax=Rhizophagus TaxID... [more]
A0A433DNN2_9FUNG6.600e-7177.03AAA domain-containing protein n=1 Tax=Jimgerdemann... [more]
A0A397TM25_9GLOM1.660e-7077.55Pre-mRNA-splicing factor n=1 Tax=Glomus cerebrifor... [more]
A0A397TXW6_9GLOM1.960e-6977.03Pre-mRNA-splicing factor n=2 Tax=Gigaspora TaxID=4... [more]
A0A433QX11_9FUNG4.880e-6977.24Pre-mRNA-splicing factor n=2 Tax=Jimgerdemannia fl... [more]
A0A397HW18_9GLOM6.910e-6978.62Pre-mRNA-splicing factor n=1 Tax=Diversispora epig... [more]
A0A2P2IBV2_9CRUS9.360e-6970.07Intron-binding protein aquarius-like (Fragment) n=... [more]
UPI0001CB97FF1.290e-6872.79intron-binding protein aquarius-like n=1 Tax=Sacco... [more]
UPI000529D4251.520e-6771.43intron-binding protein aquarius-like n=1 Tax=Coliu... [more]
A0A5N4E4K7_CAMDR1.590e-6769.59RNA helicase aquarius n=1 Tax=Camelus dromedarius ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5914contigP-wetherbeei_contig5914:3112..3555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog588596.U9U289
PFAMsAAA_11,AAA_12,Aquarius_N
Model size444
Max annot lvl4751|Fungi
KEGG koko:K12874
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0071014,GO:0071704,GO:0090304,GO:1901360,GO:1990904
Exons1
Evalue1.23e-72
EggNOG OGsKOG1806@1|root,KOG1806@2759|Eukaryota,38IBZ@33154|Opisthokonta,3NVK3@4751|Fungi
DescriptionIntron-binding protein aquarius
Cds size444
COG categoryL
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186874.4330847-CDS-P-wetherbeei_contig5914:3111..35551683186874.4330847-CDS-P-wetherbeei_contig5914:3111..3555Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5914 3112..3555 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5914.2.1prot_P-wetherbeei_contig5914.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5914 3112..3555 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5914.2.1

>prot_P-wetherbeei_contig5914.2.1 ID=prot_P-wetherbeei_contig5914.2.1|Name=mRNA_P-wetherbeei_contig5914.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
QNLGEAEYVVATYQYMRLLGYPADRIAILTTYNGQKALIRDVLQQRCAAN
PALFGAPSRVTTVDKYQGQQNDYVLLSLVRTQAVGHLRDVRRLIVAMSRA
RLGLYVFCRQALFEDCYELTPTFSQLLQRPPRLQLMLNEPWPSARLVG
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mRNA from alignment at P-wetherbeei_contig5914:3112..3555-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5914.2.1 ID=mRNA_P-wetherbeei_contig5914.2.1|Name=mRNA_P-wetherbeei_contig5914.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig5914:3112..3555- (Phaeothamnion wetherbeei SAG_119_79)
CAGAACTTGGGTGAGGCAGAGTATGTGGTGGCTACCTACCAGTACATGCG
GCTGCTGGGCTACCCCGCCGACCGGATCGCCATCCTCACCACCTACAATG
GCCAAAAAGCGCTGATCCGCGACGTCCTACAGCAGCGCTGCGCCGCCAAC
CCGGCGCTCTTCGGGGCGCCGTCACGCGTCACGACAGTCGACAAGTACCA
GGGGCAGCAGAATGATTACGTGCTGCTGTCACTGGTGCGGACGCAGGCGG
TCGGACACCTTCGGGACGTGCGACGGCTGATCGTGGCCATGTCCCGGGCA
CGGCTCGGACTCTACGTCTTCTGCCGGCAGGCGCTCTTCGAGGACTGCTA
CGAGCTGACGCCGACCTTCTCGCAGCTGCTGCAGCGGCCGCCGCGCCTGC
AGCTCATGCTCAACGAGCCGTGGCCGTCAGCGCGACTGGTTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5914:3112..3555-

>mRNA_P-wetherbeei_contig5914.2.1 ID=mRNA_P-wetherbeei_contig5914.2.1|Name=mRNA_P-wetherbeei_contig5914.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig5914:3112..3555- (Phaeothamnion wetherbeei SAG_119_79)
CAGAACTTGGGTGAGGCAGAGTATGTGGTGGCTACCTACCAGTACATGCG
GCTGCTGGGCTACCCCGCCGACCGGATCGCCATCCTCACCACCTACAATG
GCCAAAAAGCGCTGATCCGCGACGTCCTACAGCAGCGCTGCGCCGCCAAC
CCGGCGCTCTTCGGGGCGCCGTCACGCGTCACGACAGTCGACAAGTACCA
GGGGCAGCAGAATGATTACGTGCTGCTGTCACTGGTGCGGACGCAGGCGG
TCGGACACCTTCGGGACGTGCGACGGCTGATCGTGGCCATGTCCCGGGCA
CGGCTCGGACTCTACGTCTTCTGCCGGCAGGCGCTCTTCGAGGACTGCTA
CGAGCTGACGCCGACCTTCTCGCAGCTGCTGCAGCGGCCGCCGCGCCTGC
AGCTCATGCTCAACGAGCCGTGGCCGTCAGCGCGACTGGTTGGC
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