mRNA_P-wetherbeei_contig59115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: D1H013_ECTSI (Cytochrome oxidase 2 (Fragment) n=9 Tax=Ectocarpus TaxID=2879 RepID=D1H013_ECTSI) HSP 1 Score: 214 bits (544), Expect = 1.490e-64 Identity = 115/160 (71.88%), Postives = 134/160 (83.75%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLKNNSILID-------GNEEGGS-DDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
YL+TL+ LHKNT++SL+ RI+QLNLTRLE SPLDIKL PGLLQSRSYKEVLLAK+ELANIKWL ARV+KTLDIPLS EVKPFNVQFSHLK+++ ID GN E G+ DDKK K+V+EIK+ILSK Q REISY+ G QKEILQ F++LLKTV+K
Sbjct: 167 YLETLRELHKNTLLSLKSRIEQLNLTRLEFSPLDIKLNPGLLQSRSYKEVLLAKSELANIKWLSARVSKTLDIPLSNEVKPFNVQFSHLKDDNSAIDNDNFNVEGNSEAGNPDDKKGSKTVAEIKDILSKSQDREISYNQEGLQKEILQTFADLLKTVDK 326
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: D1H001_9PHAE (Cytochrome oxidase 2 (Fragment) n=3 Tax=Ectocarpus fasciculatus TaxID=43935 RepID=D1H001_9PHAE) HSP 1 Score: 209 bits (532), Expect = 9.500e-63 Identity = 114/162 (70.37%), Postives = 129/162 (79.63%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLK--NNSILIDGN--------EEGGSDDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
YL TL+ LHKNT++SL GRI+QLNLTR E SPLDIKL PGLLQSRSYKEVL+AK+ELANIKWL ARVAKTLDIPLS EVKPFNVQFSHLK N++ +ID N E G DDKK PKS +EIK ILSK Q R+ISY+ G Q+EILQ F +LLKTV+K
Sbjct: 167 YLGTLRELHKNTLLSLAGRIEQLNLTRSEFSPLDIKLNPGLLQSRSYKEVLIAKSELANIKWLSARVAKTLDIPLSNEVKPFNVQFSHLKDDNDNSIIDNNNFNVGSNNEAGNPDDKKGPKSSAEIKNILSKSQDRDISYNQEGLQEEILQTFKDLLKTVDK 328
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: E6ZES9_ECTSI (Cytochrome-c oxidase n=4 Tax=Ectocarpus TaxID=2879 RepID=E6ZES9_ECTSI) HSP 1 Score: 204 bits (519), Expect = 4.670e-58 Identity = 111/158 (70.25%), Postives = 130/158 (82.28%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLKNNSILID-----GNEEGGS-DDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
YL TL+ LHKNT++SL RI+QLNLTRLE SPLDIKL PGLLQSRSYKEVLLAK+ELANIKWL ARV+KTLDIPLS EVKPFNVQFSHL++++ ID GN E G+ DDKK KS +EIK+IL K Q REISY+ G QKE+LQ F++LLKTV++
Sbjct: 946 YLGTLRELHKNTLLSLASRIEQLNLTRLELSPLDIKLNPGLLQSRSYKEVLLAKSELANIKWLSARVSKTLDIPLSNEVKPFNVQFSHLRDDNSGIDNSNIEGNSEAGNPDDKKGSKSSAEIKDILFKSQDREISYNQEGLQKEMLQTFADLLKTVDQ 1103
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: A0A089MYN4_PETFA (Cytochrome-c oxidase n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MYN4_PETFA) HSP 1 Score: 182 bits (461), Expect = 3.030e-50 Identity = 101/167 (60.48%), Postives = 122/167 (73.05%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHL---------------KNNSILIDGNEEGGSDDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
+L+TL+ LHKNT +SL+ R +QL LT++ESSPLDIKLEPG+LQ +SYKEV+LAKAELANIKWL ARVAKTLDIPL EE KPFNVQFSHL ++NS S DK KS +EIKEILSK+ EISY+P GF+K+I+ FSELLKT++K
Sbjct: 965 HLNTLRNLHKNTSLSLKNRTEQLRLTQIESSPLDIKLEPGVLQLKSYKEVVLAKAELANIKWLAARVAKTLDIPLCEEAKPFNVQFSHLSTEGSSNVSDTSQSFEDNSSFEXXXXSDDSGDKIPAKSEAEIKEILSKINNIEISYNPKGFEKKIVYIFSELLKTLDK 1131
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: Q94YZ5_PYLLI (Cytochrome-c oxidase n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ5_PYLLI) HSP 1 Score: 176 bits (447), Expect = 2.320e-48 Identity = 100/161 (62.11%), Postives = 120/161 (74.53%), Query Frame = 1
Query: 4 LDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLK--------NNSILIDGNE--EGGSDDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
LDTL+ LHK TV+SL RI+Q+ L RLE SPLDIKLEPGLLQS+SY+EVLLAKAELANIKWLCARVAKTLDIPL +E KPFNVQFS+LK +NS L DG+ +G S DKK+PK+ EIKEILSK+ + + + EI+ F LLKT++K
Sbjct: 947 LDTLRVLHKKTVLSLTQRIEQVILMRLELSPLDIKLEPGLLQSKSYQEVLLAKAELANIKWLCARVAKTLDIPLYDEAKPFNVQFSYLKTESPTSDSSNSNLEDGDSTSDGNSGDKKKPKTEDEIKEILSKVSVIKTPDNLEELKTEIIHTFGHLLKTMDK 1107
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: A0A0U1XDJ3_9PHAE (Cytochrome-c oxidase n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XDJ3_9PHAE) HSP 1 Score: 171 bits (432), Expect = 2.420e-46 Identity = 99/166 (59.64%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHL--KNNSILID----------GNEEGGSDD---KKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVN 453
YL+TL+ LHKN +SL+ IDQL LT +E SPL I+LEPG++QS+SYKEV+LAKAELAN KWL ARVAKTLDIPL EE KPFNVQFSHL +N+S L++ G + SDD K KS EIKEILSKL EISY+ GF+K+I+ FSEL KT++
Sbjct: 956 YLETLRDLHKNIGLSLKNSIDQLRLTEIEFSPLKIRLEPGVIQSKSYKEVVLAKAELANTKWLAARVAKTLDIPLCEEAKPFNVQFSHLNTENSSNLVNEDPKDNTSSFGEGDASSDDSSDKIPSKSEKEIKEILSKLDDIEISYNAEGFKKKIVTIFSELSKTLD 1121
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: A0A3Q8QYF0_9PHAE (Cytochrome-c oxidase n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A3Q8QYF0_9PHAE) HSP 1 Score: 169 bits (429), Expect = 6.140e-46 Identity = 99/167 (59.28%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHL--KNNSILIDGNE-------------EGGSDDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
YL TL+ LHKNT +SL+ I+QL LT++ESSPLDIKLEPG+LQ +SYKEV+LAKAELANIKWL ARVAKTLDIPL EE KPFNVQFSHL K +S + D ++ S DK K SEIKE+LS E+S +P GF+K+I+ FSELLKT++K
Sbjct: 962 YLGTLRNLHKNTSLSLKDSIEQLKLTQVESSPLDIKLEPGVLQLKSYKEVILAKAELANIKWLAARVAKTLDIPLCEEAKPFNVQFSHLSAKESSNINDISQPLEDNFSSDSSFSSDDSGDKIPGKPKSEIKEVLSN-NSMEVSNNPKGFEKKIIHIFSELLKTLDK 1127
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: A0A0U1XFI4_SCYLO (Cytochrome-c oxidase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XFI4_SCYLO) HSP 1 Score: 162 bits (410), Expect = 2.210e-43 Identity = 89/165 (53.94%), Postives = 116/165 (70.30%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLK---------NNSILIDGNEEGG----SDDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
YL+TL+ LHKNT +SL +++L LT++E SPL+IKLEPG+LQ +SYKEV+LAKAELAN+KWL ARVAKTL+IPL +E KPFNVQFSHL N S+ ++ S DK KS +IKEILS + + S +P GF+K+I+ FSEL KT++K
Sbjct: 958 YLETLRNLHKNTSLSLSNSVERLKLTQIEYSPLNIKLEPGVLQLKSYKEVILAKAELANVKWLAARVAKTLNIPLCDEAKPFNVQFSHLSTEDTSTSNNNTSVSFSSDDNSSFSDDSGDKIPGKSEKDIKEILSTIDSIKTSENPEGFKKKIVSIFSELSKTLSK 1122
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: V9PAM6_UNDPI (Cytochrome-c oxidase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=V9PAM6_UNDPI) HSP 1 Score: 130 bits (326), Expect = 4.470e-32 Identity = 75/161 (46.58%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 4 LDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLK----NNSIL-----IDGNEEGGSDDKK-RPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
+++L AL T SL+ + ++ + SS ++I LEPG LQ++S EVL AKAELAN+KW ARV+++LD P+ + VKPFN QFS + NNSIL + G++ G DD KS EIKE+LSKLQ REI Y+ AG ++E+L+ F EL++TV++
Sbjct: 949 IESLVALQMATENSLKTTLSRIEKALVSSSAIEIILEPGSLQAKSSCEVLKAKAELANVKWFAARVSRSLDTPMQDTVKPFNRQFSDVSIGDSNNSILASDNSLSGSDAAGEDDNSGNKKSKEEIKEMLSKLQNREIEYTHAGLREEVLKTFKELIETVDQ 1109
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Match: A0A3G5FPR2_9PHAE (Cytochrome-c oxidase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPR2_9PHAE) HSP 1 Score: 129 bits (324), Expect = 8.340e-32 Identity = 76/163 (46.63%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 1 YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVLLAKAELANIKWLCARVAKTLDIPLSEEVKPFNVQFSHLKN-----------NSILIDGNEEGGSDDKKRPKSVSEIKEILSKLQGREISYSPAGFQKEILQNFSELLKTVNK 456
Y LK +HK + R ++ + + SPLDIKL PGLLQ +SYK +L A++EL N KW+CAR+AKTLD+PLS+ +KPFNVQF HLK+ NS L NEEGG K ISYSP G +KEIL FSELLK +NK
Sbjct: 1007 YFGELKEMHKTAFDDVVKRKNEYYALKEKFSPLDIKLSPGLLQLKSYKGLLNARSELENAKWVCARIAKTLDLPLSDNIKPFNVQFFHLKSLKSGKPCTDNDNSNLTGTNEEGGXXXXXXXK----------------ISYSPTGLKKEILNTFSELLKGINK 1153 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig59115.1.1 >prot_P-wetherbeei_contig59115.1.1 ID=prot_P-wetherbeei_contig59115.1.1|Name=mRNA_P-wetherbeei_contig59115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp YLDTLKALHKNTVISLQGRIDQLNLTRLESSPLDIKLEPGLLQSRSYKEVback to top mRNA from alignment at P-wetherbeei_contig59115:45..500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig59115.1.1 ID=mRNA_P-wetherbeei_contig59115.1.1|Name=mRNA_P-wetherbeei_contig59115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig59115:45..500+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig59115:45..500+ >mRNA_P-wetherbeei_contig59115.1.1 ID=mRNA_P-wetherbeei_contig59115.1.1|Name=mRNA_P-wetherbeei_contig59115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig59115:45..500+ (Phaeothamnion wetherbeei SAG_119_79)back to top |