mRNA_P-wetherbeei_contig591.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A811SQ34_9POAL (Protein FAR1-RELATED SEQUENCE n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811SQ34_9POAL) HSP 1 Score: 71.6 bits (174), Expect = 5.190e-10 Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 2
Query: 422 MRKEDTAAFTWAFDNYVD--WCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEHTDKHIRGDPNLLRACRAAFRKAEYAATQEE-----FDACWRDLM 736
+ E T F WAF+N+ D W GGL P +LTD C+A AAA+KT+M T H C WH+ + LK+H L + +AF+K EE F+ WR L+
Sbjct: 511 LTSEKTEDFEWAFNNFTDIIW---GGLEQPLTMLTDQCQAMAAALKTTMKGTKHRWCRWHVLRKLKQHVGN--------LYSKHSAFKKEFNKLVTEETSVQRFERKWRQLL 611
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A0F7ZZT1_9HYPO (MULE domain-containing protein n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZZT1_9HYPO) HSP 1 Score: 67.0 bits (162), Expect = 1.410e-8 Identity = 47/144 (32.64%), Postives = 62/144 (43.06%), Query Frame = 2
Query: 422 MRKEDTAAFTWAFDNYVDWC---------CDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEHTDKHIRGD-------------------PNLLRACRA-------AFRKAEYAATQEEFDACWRDLMVSGF 748
M +EDTAAFTW F+ DW D P VI+TD A AA+ + P +C+WH+ KN+ H KH +GD P R +A AF+ YA T EEFD W + ++S F
Sbjct: 44 MPREDTAAFTWCFEQLRDWMTAEARQRELADDAFIPH-VIITDYDAAERAALAATFPEAQLQVCTWHIMKNIATHARKHWQGDDDDPFELNREEIQRGEDPGPWTARPGQAKPADFIAAFQSVLYAPTAEEFDDRW-NALISAF 185
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 1.450e-8 Identity = 46/125 (36.80%), Postives = 66/125 (52.80%), Query Frame = 2
Query: 395 RTRVVCQGFMRKEDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPS--TNHLLCSWHLYKNLKEHTDKHIRGDP--NLLRACRAAFRKAEYAATQEEFDACWRDL--MVSGFD 751
+T+V QGF E T AF +A ++D C GG P VI+TD A +I+ P T HLLCSWH+ KN+K+ ++ + +LLR + +A A + E FD W D+ +V G D
Sbjct: 111 KTQVFAQGFFSNESTEAFDFANKFFLDIC--GGH--PKVIITDSDAAMKESIRGVFPPPHTTHLLCSWHICKNIKKKCLSILKSEKCADLLRR----WTRASLATSIEAFDGVWTDVEDLVKGTD 227
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A6A3CUE3_HIBSY (Protein FAR1-RELATED SEQUENCE n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CUE3_HIBSY) HSP 1 Score: 60.1 bits (144), Expect = 2.620e-6 Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 2
Query: 386 IVYRTRVVCQGFMRKEDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEHTDKHIRGDPNLLRACRAAFRKAEYAA-TQEEFDACWRDLMV 739
IV+ T ++ E + +F W N+++ + P ++TD KA AIK+ +P T H+LCSWHL N + + GDP AAF K + T EEFD WR +++
Sbjct: 185 IVFATAIIAD-----ETSQSFEWVLQNFLEAMMNKS---PISVVTDGDKAMQRAIKSIIPYTKHILCSWHLSHNAQANI-----GDPKFT----AAFSKCMASWWTTEEFDIQWRSVIL 286
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A0A9TKT4_ARUDO (Protein FAR1-RELATED SEQUENCE n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9TKT4_ARUDO) HSP 1 Score: 60.1 bits (144), Expect = 2.960e-6 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 2
Query: 422 MRKEDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKE 616
+ +E TA F WAF ++ GG P +LTD C+A AAIKT++P+T H C WH+ + +KE
Sbjct: 432 LTRETTADFEWAFSKFIKTM--GGKAPV-TMLTDQCQAMEAAIKTTLPNTKHRWCRWHVLRKVKE 493
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A5J9WPP5_9POAL (Protein FAR1-RELATED SEQUENCE (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WPP5_9POAL) HSP 1 Score: 58.9 bits (141), Expect = 6.600e-6 Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = 2
Query: 422 MRKEDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEH 619
+R E T F WAF ++ DG P ILTD C+A AAIKT++PS H C WH+ K KE+
Sbjct: 309 LRTEKTEDFVWAFSAFLK-IMDGKA--PQTILTDQCQAMEAAIKTTIPSARHRWCRWHVLKKAKEY 371
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A5J9UJV8_9POAL (Protein FAR1-RELATED SEQUENCE (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UJV8_9POAL) HSP 1 Score: 58.9 bits (141), Expect = 6.680e-6 Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = 2
Query: 431 EDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKE 616
E T +F W+F + + G CP ILTD C A AA+KT+MP T H C WH+ +N KE
Sbjct: 310 ETTESFEWSFSTFQNIM--NGKCPQ-TILTDQCAAMEAALKTTMPGTRHRWCRWHVLRNAKE 368
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: UPI0018F7E879 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7E879) HSP 1 Score: 58.5 bits (140), Expect = 8.800e-6 Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 2
Query: 431 EDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEHTDKHIRGDPNLLRACRAAFRKAEYAATQEEFDACWRDLM 736
E T + W D ++ G P VI TD CKA AAAI+ +P+ H LC WHL +N + H PN +++ FR E E FD W +L+
Sbjct: 283 ETTTTYMWLLDTFLR--AMGNKMPVSVI-TDGCKAMAAAIRAKLPNARHRLCEWHLERNCSANI--HRGNFPNEVKSL---FRHKE----PETFDTAWHELL 372
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: A0A0C4FE01_PUCT1 (MULE domain-containing protein n=2 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4FE01_PUCT1) HSP 1 Score: 55.1 bits (131), Expect = 1.360e-5 Identity = 23/73 (31.51%), Postives = 43/73 (58.90%), Query Frame = 2
Query: 419 FMRKEDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEHTDKHIR 637
F+ KE + WA + + + P V+LTD +A ++++++ P++ H+LC+WH+ KNL + KHI+
Sbjct: 65 FLAKETQDYYDWALKSLLTVFTSNKIPLPAVVLTDQEEALISSLQSNFPNSTHMLCTWHIQKNLVSNGAKHIK 137
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Match: UPI0018F80BCC (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F80BCC) HSP 1 Score: 57.4 bits (137), Expect = 1.510e-5 Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 2
Query: 431 EDTAAFTWAFDNYVDWCCDGGLCPPGVILTDDCKAAAAAIKTSMPSTNHLLCSWHLYKNLKEHTDKHIRGDPNLLRACRAAFRKAEYAATQEEFDACWRDLM 736
E T + W D ++ G P VI TD CKA AAAI+ +P+ H LC WHL +N + H PN +++ FR + E FD W +L+
Sbjct: 283 ETTTTYMWLLDTFLR--AMGNKMPVSVI-TDGCKAMAAAIRAKLPNARHRLCEWHLERNCSANI--HRGNFPNEVKSL---FRHKD----PETFDTAWHELL 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig591.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig591.1.1 >prot_P-wetherbeei_contig591.1.1 ID=prot_P-wetherbeei_contig591.1.1|Name=mRNA_P-wetherbeei_contig591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp MVASMLAAEYNLHAAAQYIRVCRPSNWTCTGWCSPCPDPTHKLVGTGGGNback to top mRNA from alignment at P-wetherbeei_contig591:58..1057+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig591.1.1 ID=mRNA_P-wetherbeei_contig591.1.1|Name=mRNA_P-wetherbeei_contig591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1000bp|location=Sequence derived from alignment at P-wetherbeei_contig591:58..1057+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig591:58..1057+ >mRNA_P-wetherbeei_contig591.1.1 ID=mRNA_P-wetherbeei_contig591.1.1|Name=mRNA_P-wetherbeei_contig591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig591:58..1057+ (Phaeothamnion wetherbeei SAG_119_79)back to top |