prot_P-wetherbeei_contig591.9.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig591.9.1
Unique Nameprot_P-wetherbeei_contig591.9.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length322
Homology
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BLAST of mRNA_P-wetherbeei_contig591.9.1 vs. uniprot
Match: A0A836C7R9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.370e-10
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 0 
Query:  179 ITTALFNALAEVAREGMVGLRLRSGDGASAK----KSVEVLLLEPAFNATLPGNIPPITRRSLRALRKVIAWLKPEALAAF----VQADSAASTASKASPPSAAEFYAAVEAARSADPAVQRALVDGCELPPMPELEPTLRRYQQAAVAFMV 322
            I  AL+ AL    ++ +V L        SA+    + + + L   AF+AT P ++PP+T+ +LR LR ++  L P  L  +    + AD    +    +  +A E Y A+EA R+AD  +QRAL  G  LP  P L P LRRYQQAAVA+M+
Sbjct:  148 IDAALWAALRASLQDKLVALHAPDDACGSAQPLRPRRLRLSLQRAAFSATSPLSVPPVTKPALRRLRDLVFALSPATLEPYWSPRLAADGGGGSGGS-TLITAHELYDAIEARRAADAPLQRALQAGAPLPRTPALLPALRRYQQAAVAWML 298
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig591.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C7R9_9STRA5.370e-1037.50SNF2 family N-terminal domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig591contigP-wetherbeei_contig591:5155..6222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig591.9.1mRNA_P-wetherbeei_contig591.9.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig591 4903..6222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig591.9.1 ID=prot_P-wetherbeei_contig591.9.1|Name=mRNA_P-wetherbeei_contig591.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=322bp
MPRKTFTPKKKEGSTTNFAQPALPQVAEPDDDRHAPNEEAWDAGEVFVEE
EEDGEEGAVRQPKRYKRAKEIAASVPEGGTTPPTLGLVQLKSASNRAVKR
LIPGRHVAVDGESFVRLVEGIRNSKVVADDEESPKKPIGVGVFAAVGDEA
VQGSEANDGDGSMALTLPEASNLAGILPITTALFNALAEVAREGMVGLRL
RSGDGASAKKSVEVLLLEPAFNATLPGNIPPITRRSLRALRKVIAWLKPE
ALAAFVQADSAASTASKASPPSAAEFYAAVEAARSADPAVQRALVDGCEL
PPMPELEPTLRRYQQAAVAFMV
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