mRNA_P-wetherbeei_contig59097.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59097.1.1
Unique NamemRNA_P-wetherbeei_contig59097.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A1Z4VNH4_9GAMM (Uncharacterized protein n=2 Tax=Thiohalobacter TaxID=1273155 RepID=A0A1Z4VNH4_9GAMM)

HSP 1 Score: 200 bits (508), Expect = 1.110e-60
Identity = 94/162 (58.02%), Postives = 116/162 (71.60%), Query Frame = 1
Query:   13 SSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            SSGNT+TE+Y++DAEVVART  NR+T+G    R+ D G ET SN   Y KYDHFLT+KWY YAN  F  D+FKD+ LR TLG+GSGYQF ES+  NLSLEGGLTYV+ DF    D+ YPAGRWA   D  LF ++++ FH HE  + LED   + + S+TGL
Sbjct:  138 SSGNTDTEQYHLDAEVVARTLTNRFTVGATFNRSTDDGTETASNATGYGKYDHFLTEKWYTYANALFTRDEFKDLKLRTTLGLGSGYQFYESEPLNLSLEGGLTYVNEDFYDKEDESYPAGRWALNYDRLLFGSRLRFFHYHEGLLGLEDINDILILSRTGL 299          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A426QIB9_9GAMM (DUF481 domain-containing protein n=1 Tax=Thiohalobacter thiocyanaticus TaxID=585455 RepID=A0A426QIB9_9GAMM)

HSP 1 Score: 200 bits (508), Expect = 1.200e-60
Identity = 94/166 (56.63%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G++ SSGNT+TE+Y++D EVVART +NR+T+G    R  DSG ETESN   Y KYDHF+++KWY YAN  F  D+ KD+ LR TLG+GSGYQF ES+  NLSLEGGLTYV+ DF    D+ YPAGRWA   D  LF ++I+ FH HE    LED   + + S+TGL
Sbjct:  137 GVNISSGNTDTEQYHLDTEVVARTLENRFTVGATFNRTTDSGTETESNATGYGKYDHFVSEKWYNYANALFTRDELKDLKLRTTLGLGSGYQFFESEPLNLSLEGGLTYVNEDFYDKEDESYPAGRWALNYDRLLFGSRIRFFHYHEGLAGLEDVDDIMILSRTGL 302          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A847DE28_9DELT (DUF481 domain-containing protein n=1 Tax=Desulfatiglans sp. TaxID=1969697 RepID=A0A847DE28_9DELT)

HSP 1 Score: 196 bits (499), Expect = 2.650e-59
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G++ +SGNT  +  + D E  ART  NRYT GG+  R++D+GI+TESN L Y+KYDHFL++KW+AYAN  F+ DKFKD+SLR+ LGVG G+QF E+ +TNLS+E GL YV  D+IVAPD  Y +GRWA   D   ++   + FH HE +V+LED   MF++S+TG+
Sbjct:  134 GMTFTSGNTEKDTTHFDGEFSARTEKNRYTAGGQLNRSEDNGIKTESNSLGYLKYDHFLSEKWFAYANSLFEKDKFKDLSLRSALGVGVGHQFFETPETNLSIESGLNYVSDDYIVAPDKSYSSGRWAVNYDRFFYNKAFQFFHFHEGFVSLEDTDDMFIKSRTGI 299          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A0S8D921_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8D921_9PROT)

HSP 1 Score: 189 bits (480), Expect = 1.380e-56
Identity = 86/166 (51.81%), Postives = 119/166 (71.69%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G SS+SGNT+ E+     EVVAR+  NR T+G    RA+  G +TESNWLAY+ YDHF+T+KWYAYA+   +NDKFKDI+LR TLG G+GYQF E+++TNLS+E G +YV+TD+    D DYPA RWA     +LF ++++ F+    +V L+D+   F+R++TGL
Sbjct:  124 GASSTSGNTDKEQLNGSFEVVARSAKNRMTIGAEANRAETDGAQTESNWLAYLAYDHFITEKWYAYASTSAENDKFKDINLRTTLGAGAGYQFFETEQTNLSMELGASYVNTDYDTGVDSDYPAARWAMNFRQKLFKSRVEFFNTDSVHVALDDSDNFFLRTRTGL 289          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A7K4E4Z8_9EURY (DUF481 domain-containing protein n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4E4Z8_9EURY)

HSP 1 Score: 189 bits (480), Expect = 1.710e-56
Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G+  + GNT+ E Y+ D E VART+ NR+T G    +A D+ +E+E+N  AY+KYDHF T KWY+YAN     D F D++LR TLG+G+GYQFIESD TNLSLEGGL+YV+ DF +APD+ YPA RW+   DH L+  K++ FH HE  + LED   + + ++TGL
Sbjct:  132 GVYIAKGNTDKEAYHADIEAVARTKQNRFTAGAIYNQALDNDVESENNATAYLKYDHFFTDKWYSYANTVLFKDDFADLNLRTTLGLGAGYQFIESDLTNLSLEGGLSYVNEDFELAPDESYPAARWSLNYDHFLYPKKLQFFHFHEGLLGLEDTNDIIIVTRTGL 297          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A7C1U5C2_9GAMM (DUF481 domain-containing protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1U5C2_9GAMM)

HSP 1 Score: 185 bits (470), Expect = 5.890e-55
Identity = 85/166 (51.20%), Postives = 117/166 (70.48%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G++ S GNT+TE  + D EVVART  NR+TLG    R++  G++T+++   Y KYDHFL +KWY YAN  F  DKFKDI +R TLG+GSGYQF+ S + NLSLEGGL YV+ D+ VA D+ YP+ RW+   D  +  T+++ FH HE Y+ L +A+  F+R+QTG+
Sbjct:  135 GINISKGNTDTEDAHFDGEVVARTLKNRFTLGAIFNRSRSYGVDTKNDATGYAKYDHFLEEKWYTYANALFFRDKFKDIRMRTTLGLGSGYQFVTSPRKNLSLEGGLNYVNEDYYVAEDNAYPSARWSLNYDQYIGQTEMQFFHFHEGYIGLTNAEDFFLRTQTGV 300          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A0S8CBK3_9BACT (Uncharacterized protein n=1 Tax=Nitrospira bacterium SG8_3 TaxID=1704023 RepID=A0A0S8CBK3_9BACT)

HSP 1 Score: 184 bits (466), Expect = 2.350e-54
Identity = 83/167 (49.70%), Postives = 114/167 (68.26%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIV-APDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G+    GNT T+ Y +D E+ ART  NRYT+G    R ++S  +T  NWL YM YDHFLT+KW+ Y N +F+ D+FKD++LR T+G GSGYQF ES++ NLS+ GG  YV+ D+ V   D+DY AG WA + D  LFD  ++ FH HE  V+LED + + +R++TGL
Sbjct:  133 GVDVKKGNTETDAYTVDGELEARTEKNRYTVGAEANREEESDEKTADNWLLYMSYDHFLTQKWFFYTNANFEQDEFKDLNLRTTVGAGSGYQFFESERKNLSVRGGPAYVNEDYTVDGEDNDYAAGLWAVRYDQYLFDKFVQLFHLHEGIVSLEDTQDIVIRTRTGL 299          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A7C4N1R8_9DELT (DUF481 domain-containing protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C4N1R8_9DELT)

HSP 1 Score: 185 bits (469), Expect = 2.420e-54
Identity = 86/165 (52.12%), Postives = 114/165 (69.09%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTG 495
            G S + GNT+T+  Y DAE +ART  NRYT+GG   R++D  ++TE   L YMKYDHF TKKWY YAN   + D+FKD+ LR TLGVG+GYQFIESD+TNLS+E GL+YV  ++IVA D+ + AGRW  K DH L    ++ F  H    ++ED+  + + +QTG
Sbjct:  175 GFSMTDGNTDTQDLYADAEFMARTLQNRYTIGGLYKRSEDDNVKTEDKALGYMKYDHFFTKKWYGYANATGEQDEFKDLDLRVTLGVGAGYQFIESDRTNLSVEAGLSYVDENYIVAEDNSFAAGRWGLKFDHFLLPKSLQYFLYHTGLQSIEDSDDLILFTQTG 339          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A2S8K5D0_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium SEEP-SAG9 TaxID=2100161 RepID=A0A2S8K5D0_9DELT)

HSP 1 Score: 176 bits (446), Expect = 1.830e-52
Identity = 81/160 (50.62%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   19 GNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            GNTN++ YY D E +ART+ NRY +GG  T  K  GI T  NWL Y  Y HFL +KWY YAN  F++D+FKD++LR+TLG G GYQF E+   NLSL  G   V  +F VA D+DY AG+W    D   FD  ++ FH +  YV+LEDA K  ++++TGL
Sbjct:   45 GNTNSDNYYFDGEFMARTKTNRYRIGGELTNEKADGITTSQNWLGYGNYSHFLNEKWYLYANTLFEHDEFKDLNLRSTLGAGIGYQFFETPLLNLSLAAGPAMVDENFDVAEDNDYSAGQWTINYDQYFFDKFVQFFHVNTGYVSLEDANKWILKTRTGL 204          
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Match: A0A3A4Z1S2_9DELT (DUF481 domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4Z1S2_9DELT)

HSP 1 Score: 177 bits (449), Expect = 1.810e-51
Identity = 85/166 (51.20%), Postives = 111/166 (66.87%), Query Frame = 1
Query:    1 GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWLAYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTNLSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYVNLEDAKKMFVRSQTGL 498
            G++ + GNT TE  Y+DAE+VART  NR TLGG    A++   +T  N   YMKYD+FLT+KWY  A G    DKFKD++LR+T G+G GYQF ++  T L+ E GL+YV+ D+ VA D DY AGRWA    H L   ++  FH HE  V+LEDA  +F+RS+TGL
Sbjct:  166 GVTITEGNTETESIYVDAELVARTSRNRVTLGGIHREAREDEDKTADNTTVYMKYDYFLTEKWYLLATGTGVKDKFKDLNLRSTAGLGLGYQFFDTPLTKLAFEAGLSYVNDDYKVAEDKDYMAGRWAANFSHHLIKDRLMFFHGHEGLVSLEDADDIFIRSKTGL 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59097.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z4VNH4_9GAMM1.110e-6058.02Uncharacterized protein n=2 Tax=Thiohalobacter Tax... [more]
A0A426QIB9_9GAMM1.200e-6056.63DUF481 domain-containing protein n=1 Tax=Thiohalob... [more]
A0A847DE28_9DELT2.650e-5953.61DUF481 domain-containing protein n=1 Tax=Desulfati... [more]
A0A0S8D921_9PROT1.380e-5651.81Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A7K4E4Z8_9EURY1.710e-5652.41DUF481 domain-containing protein n=1 Tax=Halobacte... [more]
A0A7C1U5C2_9GAMM5.890e-5551.20DUF481 domain-containing protein n=1 Tax=Thiotrich... [more]
A0A0S8CBK3_9BACT2.350e-5449.70Uncharacterized protein n=1 Tax=Nitrospira bacteri... [more]
A0A7C4N1R8_9DELT2.420e-5452.12DUF481 domain-containing protein n=1 Tax=Desulfoba... [more]
A0A2S8K5D0_9DELT1.830e-5250.63Uncharacterized protein n=1 Tax=Desulfobacteraceae... [more]
A0A3A4Z1S2_9DELT1.810e-5151.20DUF481 domain-containing protein n=1 Tax=Desulfoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59097contigP-wetherbeei_contig59097:2..499 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1165096.ARWF01000001_gene1808
PFAMsDUF481
Model size498
Max annot lvl206350|Nitrosomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.37e-49
EggNOG OGsCOG3137@1|root,COG3137@2|Bacteria,1RHDT@1224|Proteobacteria,2VTTP@28216|Betaproteobacteria,2KKD2@206350|Nitrosomonadales
DescriptionProtein of unknown function, DUF481
Cds size498
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186873.6836693-CDS-P-wetherbeei_contig59097:1..4991683186873.6836693-CDS-P-wetherbeei_contig59097:1..499Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59097 2..499 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59097.1.1prot_P-wetherbeei_contig59097.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59097 2..499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59097.1.1

>prot_P-wetherbeei_contig59097.1.1 ID=prot_P-wetherbeei_contig59097.1.1|Name=mRNA_P-wetherbeei_contig59097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
GLSSSSGNTNTERYYMDAEVVARTRDNRYTLGGRGTRAKDSGIETESNWL
AYMKYDHFLTKKWYAYANGDFQNDKFKDISLRNTLGVGSGYQFIESDKTN
LSLEGGLTYVHTDFIVAPDDDYPAGRWAFKVDHRLFDTKIKAFHNHEAYV
NLEDAKKMFVRSQTGL
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mRNA from alignment at P-wetherbeei_contig59097:2..499-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59097.1.1 ID=mRNA_P-wetherbeei_contig59097.1.1|Name=mRNA_P-wetherbeei_contig59097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59097:2..499- (Phaeothamnion wetherbeei SAG_119_79)
GGTCTTTCGTCGAGTTCCGGCAATACCAACACCGAACGCTATTACATGGA CGCCGAGGTGGTGGCGCGCACGCGCGACAATCGCTACACATTGGGTGGGC GCGGCACGCGGGCCAAGGATTCGGGCATCGAAACCGAGTCGAACTGGCTT GCCTACATGAAGTACGACCACTTCCTGACGAAGAAGTGGTACGCCTATGC GAACGGGGATTTTCAGAACGACAAATTCAAGGACATCAGCCTGCGTAACA CGCTGGGTGTCGGTTCGGGCTATCAGTTCATCGAATCGGACAAGACCAAC CTGTCGCTCGAAGGCGGCCTGACTTATGTGCACACCGATTTCATCGTCGC GCCGGATGACGATTATCCGGCCGGGCGCTGGGCATTCAAGGTCGATCACC GGTTGTTCGACACAAAAATAAAGGCGTTTCACAACCACGAGGCCTACGTC AACCTCGAGGACGCCAAGAAAATGTTCGTGCGCTCGCAGACCGGACTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59097:2..499-

>mRNA_P-wetherbeei_contig59097.1.1 ID=mRNA_P-wetherbeei_contig59097.1.1|Name=mRNA_P-wetherbeei_contig59097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig59097:2..499- (Phaeothamnion wetherbeei SAG_119_79)
GGTCTTTCGTCGAGTTCCGGCAATACCAACACCGAACGCTATTACATGGA
CGCCGAGGTGGTGGCGCGCACGCGCGACAATCGCTACACATTGGGTGGGC
GCGGCACGCGGGCCAAGGATTCGGGCATCGAAACCGAGTCGAACTGGCTT
GCCTACATGAAGTACGACCACTTCCTGACGAAGAAGTGGTACGCCTATGC
GAACGGGGATTTTCAGAACGACAAATTCAAGGACATCAGCCTGCGTAACA
CGCTGGGTGTCGGTTCGGGCTATCAGTTCATCGAATCGGACAAGACCAAC
CTGTCGCTCGAAGGCGGCCTGACTTATGTGCACACCGATTTCATCGTCGC
GCCGGATGACGATTATCCGGCCGGGCGCTGGGCATTCAAGGTCGATCACC
GGTTGTTCGACACAAAAATAAAGGCGTTTCACAACCACGAGGCCTACGTC
AACCTCGAGGACGCCAAGAAAATGTTCGTGCGCTCGCAGACCGGACTG
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