prot_P-wetherbeei_contig5909.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5909.1.1
Unique Nameprot_P-wetherbeei_contig5909.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length711
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5909.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..302
NoneNo IPR availableCOILSCoilCoilcoord: 330..350
NoneNo IPR availableGENE3D6.10.140.1350coord: 419..483
e-value: 4.1E-10
score: 41.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..504
NoneNo IPR availablePANTHERPTHR13437:SF2NUCLEOPORIN P58/P45coord: 115..352
coord: 439..635
IPR025574Nucleoporin FG repeatPFAMPF13634Nucleoporin_FGcoord: 16..107
e-value: 0.021
score: 15.7
coord: 579..667
e-value: 3.8E-6
score: 27.7
coord: 525..573
e-value: 41.0
score: 5.1
IPR024882Nucleoporin p58/p45PANTHERPTHR13437NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1coord: 115..352
IPR024882Nucleoporin p58/p45PANTHERPTHR13437NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1coord: 439..635

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5909contigP-wetherbeei_contig5909:452..3367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5909.1.1mRNA_P-wetherbeei_contig5909.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5909 299..3465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5909.1.1 ID=prot_P-wetherbeei_contig5909.1.1|Name=mRNA_P-wetherbeei_contig5909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=711bp
MAFSFAAPAPAGGGFSFGTQQAGGLFGAPAPAPATGGAFGGFGTQAAAPT
SGFGGFGSPAPAPAAGSGGFGGFGTPAPAPAAGGFGTAGGGLFGQVPAPA
PGGGLFGAPMPAPSGGVFGGFSSPAPAPAPGGFGTAGGGLFGAPMPAPAP
SGGLFGGFGAPAPAPGGFGAAPSAFRAPAPLAFGGLSGGQLQQQQFQQQL
QQQQQQQQLATLAPETMFTALPEAAKRVIDALYAEMTRQQQVGAHLAKAD
GAWLDGLQHEADGLRQELTALENMQKVEKVELKELKEVADAVVRDAENYA
KAGVRELQRASGSALQTREDLPSRFMWETVHRFESRLDRYADEIDEIEQQ
LVYASGGGFGSGFSGFGDGFGKGGVPLAIAADLVDAAAGVGAVGGSGWGV
GYGSGRGGSGLGSGGSGAAAGAVVAGAASAATYGQRGRVTPEHLAHLLRT
QHKAFMATAGHVAAVHEQMNALREEYVARTGRDPFAAADRRVEDEERAKM
REMRAARSPPQQPRQQQPGMQPGMQQPGMQQQPGLFGGAGVAPAPLSLFG
APAPAPGPSGGLLSGFGGFGAAPAPAPGFGGGGGGSLFGSTPAAAPTGAG
LFGAAAPSPATAGGLFGAATTAPAVGGLFGTPAAPAPAGSVFGGGGGFGG
FGASAAAAPAAGGSLFGTVAPLAASQSSSNIFGLSNGGGALGAGKKKPTS
STSKKGGRSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025574Nucleoporin_FG_rpt
IPR024882Nucleoporin_p58/p45