mRNA_P-wetherbeei_contig5907.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig5907.1.2
Unique Name	mRNA_P-wetherbeei_contig5907.1.2
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: D7FR97_ECTSI (Ribosome biogenesis protein NSA2 homolog n=3 Tax=PX clade TaxID=569578 RepID=D7FR97_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 1.010e-170
Identity = 245/260 (94.23%), Postives = 258/260 (99.23%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHEYME H+KRHGER+DRAEKRRKK+AREVHKRSEFAQKVHG+RAKLYQ+KR+KEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPV+DDEMFKVLRSGKRKNK+WKRMVTKVTFVGEGFTRKAPKYERFIRP+ LRFKKAHVTHPEL+ATFHLDILGVKKNPSSPLYTQLGV+TKGTVIEVNVSDLGLVTQSGKVVWGKYAQV+N+PELDGCINAVLLV
Sbjct:    1 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: A0A7S2SRB9_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB9_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 8.300e-156
Identity = 228/260 (87.69%), Postives = 245/260 (94.23%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQ+E+ME HRKRHGER+D  E+ RK++ARE HKRSEFAQKVHG+RAKLY QKR+KEKATMRKTI+MHQER NKHAND+AVP GAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPV+DDEMFKVLRSGKRK K+WKRMVTKV FVGE FTRK PKYERFIRP+ LRFKKAHVTHPELQATFHLDI+GVKKNPSS LYTQLGVITKGTVIEVNVS+LGLVTQSGKVVWGKYAQV+N PELDGCINAVLLV
Sbjct:    1 MPQNEHMELHRKRHGERMDAEERSRKRQAREAHKRSEFAQKVHGIRAKLYHQKRFKEKATMRKTISMHQERDNKHANDEAVPKGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWEVPIPKVKPVADDEMFKVLRSGKRKAKAWKRMVTKVCFVGENFTRKNPKYERFIRPTGLRFKKAHVTHPELQATFHLDIIGVKKNPSSSLYTQLGVITKGTVIEVNVSELGLVTQSGKVVWGKYAQVTNNPELDGCINAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: A0A662Y3D7_9STRA (Ribosome biogenesis protein NSA2 homolog n=3 Tax=Oomycota TaxID=4762 RepID=A0A662Y3D7_9STRA)

HSP 1 Score: 447 bits (1151), Expect = 5.260e-155
Identity = 222/260 (85.38%), Postives = 244/260 (93.85%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHE+ME HRKRHG R+D AEK+RKKEAREVH+RS+FAQKVHGLRAKLY QKR+KEKA M+KT+A+H ERTNKHANDD +PDGAVP+YLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKP++DDEMFKVLRSGKR+NK+WKRM+TK TFVGE FTRK PKYERFIRPSA+RFKKAHVTHPEL+ TF LDILGVKKNP SPLYTQLGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQ++N PE DGCINAVLLV
Sbjct:   72 MPQHEHMEMHRKRHGVRMDAAEKKRKKEAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLDILGVKKNPQSPLYTQLGVMTKGTVIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 331

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: A0A7S2DND8_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND8_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 5.610e-154
Identity = 228/269 (84.76%), Postives = 246/269 (91.45%), Query Frame = 3

Query:   36 LFGQRPAPTMPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            LF  +  P MPQ+E+MEQHRKRHGERLD  E+ RK++AREVHK+S+FAQ VHGLRAKLY QKR+KEKA MRKTIAMHQER NKH NDDA+P  A+PAYLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPV+D+EMFKV+RSGKRK K+WKRMVTKVTFVG  FTRK PKYERFIRPS LRFKKAHVTHPELQATFHLD+LGVKKNPSS LYTQLGVITKGTVIEVNVSDLGLVT SGKVVWGKYAQV+N PELDGCINAVLLV
Sbjct:    2 LFTLQRKPKMPQNEHMEQHRKRHGERLDTEERARKRQAREVHKKSKFAQCVHGLRAKLYNQKRFKEKAVMRKTIAMHQERDNKHGNDDALPKDALPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWNVPIPKVKPVADEEMFKVMRSGKRKAKAWKRMVTKVTFVGPNFTRKNPKYERFIRPSGLRFKKAHVTHPELQATFHLDLLGVKKNPSSNLYTQLGVITKGTVIEVNVSDLGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 270

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: A0A7S2V588_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V588_9STRA)

HSP 1 Score: 439 bits (1129), Expect = 9.150e-153
Identity = 218/260 (83.85%), Postives = 245/260 (94.23%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHEY+E H+KRHG R+D  E++RK+ ARE H+RS+FAQKVHGLRAKLY ++R+KEKATM+KT+AMHQERTNKH N+DAVP GAVPAYLLDREGVSRAKVLSNT+KQKRKEKAGKWDVPIPKVKPV+DDEMFK++R+GKR+ K+WKRMVTKVTFVG+ FTRKAPKYERFIRP+ LRFKKAHVTHPEL+ATFHL ILGVKKNPSSP+YTQLGVITKGTVIEVNVS+LGLVT SGKVVWGKYAQV+N PELDGCINAVLLV
Sbjct:    1 MPQHEYIELHKKRHGIRMDAEERKRKRAAREAHRRSQFAQKVHGLRAKLYNKQRFKEKATMKKTLAMHQERTNKHGNEDAVPSGAVPAYLLDREGVSRAKVLSNTIKQKRKEKAGKWDVPIPKVKPVADDEMFKIMRTGKRRAKAWKRMVTKVTFVGDDFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLQILGVKKNPSSPMYTQLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: W4GLP2_9STRA (Ribosome biogenesis protein NSA2 homolog n=6 Tax=Oomycota TaxID=4762 RepID=W4GLP2_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 3.720e-152
Identity = 218/260 (83.85%), Postives = 241/260 (92.69%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHE+ME H+KRHG R D  E+ RKKEAREVH+RS FAQKVHGLRAKLY QKR+KEKA M+KT+AMH ERTNKHANDD +PDGAVP+YLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKP++DDEMFKVLRSGKR+NK+WKRM+TK TFVGE FTRK PKYERFIRP+A+RFKKAHVTHPEL+ TF LDILGVKKNPSSPLYTQLGV+TKGT+IEVNVS+LGLVT +GKVVWGK+AQV+N PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRYDHHERARKKEAREVHRRSAFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPSSPLYTQLGVMTKGTIIEVNVSELGLVTTTGKVVWGKFAQVTNNPENDGCINAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: W7THK2_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THK2_9STRA)

HSP 1 Score: 436 bits (1121), Expect = 1.510e-151
Identity = 220/260 (84.62%), Postives = 242/260 (93.08%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQH+YMEQHRK+HGERLDR E+ RKKEAREVH+RS+FAQKVHGLRAKLY  KRYKEKA MRKT+AMHQE+TNK AN +  P+GAVPAYL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKPV+DDEMFKV++SGKRK KSWKRMVTKVTFVGE FTRKAPK+ERFIRP+ LRFKKAHVTHP+LQATF LDILGVKKNPSSP+YT LGVITKGTVIEVNVS+LGLVT SGKVVWGKYAQV+N PELDGCINAVLLV
Sbjct:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: F0WA33_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WA33_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 1.230e-150
Identity = 214/260 (82.31%), Postives = 240/260 (92.31%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHE++E H+KRHG RLD+ E+ RKKEARE H+RS+FAQKVHGLRAKLY QKR+KEKA M+KT+AMHQERTNK  N+DA+PDGAVP+YLLDREGVS+AK+LSNTVKQKRKEKAGKW VPIPKVKP++DDEMFKVLRSGKR+NKSWKRM+TK TFVGE FTRK PKYERFIRPSA+RFKKAHVTHPELQ TF L I+GVKKNP SPLYTQLGV+TKGT+IEVNVS+LGLVT SGKVVWGKYAQ++N PE DGCINAVLLV
Sbjct:    1 MPQHEHIELHKKRHGVRLDQPERHRKKEAREAHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTVAMHQERTNKQGNNDAIPDGAVPSYLLDREGVSKAKILSNTVKQKRKEKAGKWSVPIPKVKPIADDEMFKVLRSGKRRNKSWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELQTTFQLAIIGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: B8C4B1_THAPS (Ribosome biogenesis protein NSA2 homolog n=9 Tax=Bacillariophyta TaxID=2836 RepID=B8C4B1_THAPS)

HSP 1 Score: 420 bits (1079), Expect = 3.680e-145
Identity = 211/260 (81.15%), Postives = 235/260 (90.38%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHE+ME+HRK HG R D  E+ RK+EAR  HKRSEFAQKVHGLRAKLY Q+R+KEKATMRKTIA H ER+NKHANDDAV DGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPV+DDEMFKV+R+G +KNK+WKR+VTK TFVG+ FTRKAPKYERFIRP+ LR K+A+VTHPEL+ +F LDILGVKKNPSS LYT LGV+TKGT+IEVNVSDLGLVT SGKV WGK AQV+N PELDGC+NAVLLV
Sbjct:    1 MPQHEHMERHRKLHGRRFDAEERERKREARSAHKRSEFAQKVHGLRAKLYNQRRFKEKATMRKTIAQHNERSNKHANDDAVADGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWEVPIPKVKPVADDEMFKVMRTGSKKNKAWKRVVTKCTFVGDNFTRKAPKYERFIRPTGLRMKRANVTHPELKTSFQLDILGVKKNPSSSLYTNLGVLTKGTIIEVNVSDLGLVTTSGKVAWGKMAQVTNNPELDGCVNAVLLV 260

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BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Match: H3G9L7_PHYRM (Ribosome biogenesis protein NSA2 homolog n=30 Tax=Oomycota TaxID=4762 RepID=H3G9L7_PHYRM)

HSP 1 Score: 417 bits (1071), Expect = 6.060e-144
Identity = 209/260 (80.38%), Postives = 231/260 (88.85%), Query Frame = 3

Query:   63 MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLYQQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMVTKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVKKNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPELDGCINAVLLV 842
            MPQHE+ME HRKRHG R+D AEK+RKKEAR VH RS+FAQKV            +KEKA M+KT+A+H ERTNKHANDD +PDGAVP+YLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKP++DDEMFKVLRSGKR+NK+WKRM+TK TFVGE FTRK PKYERFIRPSA+RFKKAHVTHPEL+ TF LDILGVKKNP SPLYTQLGV+TKGT+IEVNVS+LGLVT SGKVVWGKYAQ++N PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHRKRHGVRMDAAEKKRKKEARAVHTRSQFAQKVXXXXXXXXXXXXFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLDILGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5907.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FR97_ECTSI	1.010e-170	94.23	Ribosome biogenesis protein NSA2 homolog n=3 Tax=P...	[more]
A0A7S2SRB9_9STRA	8.300e-156	87.69	Ribosome biogenesis protein NSA2 homolog n=1 Tax=R...	[more]
A0A662Y3D7_9STRA	5.260e-155	85.38	Ribosome biogenesis protein NSA2 homolog n=3 Tax=O...	[more]
A0A7S2DND8_9STRA	5.610e-154	84.76	Ribosome biogenesis protein NSA2 homolog n=2 Tax=D...	[more]
A0A7S2V588_9STRA	9.150e-153	83.85	Ribosome biogenesis protein NSA2 homolog n=1 Tax=F...	[more]
W4GLP2_9STRA	3.720e-152	83.85	Ribosome biogenesis protein NSA2 homolog n=6 Tax=O...	[more]
W7THK2_9STRA	1.510e-151	84.62	Ribosome biogenesis protein NSA2 homolog n=2 Tax=M...	[more]
F0WA33_9STRA	1.230e-150	82.31	Ribosome biogenesis protein NSA2 homolog n=1 Tax=A...	[more]
B8C4B1_THAPS	3.680e-145	81.15	Ribosome biogenesis protein NSA2 homolog n=9 Tax=B...	[more]
H3G9L7_PHYRM	6.060e-144	80.38	Ribosome biogenesis protein NSA2 homolog n=30 Tax=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5907	contig	P-wetherbeei_contig5907:120..3652 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FR97
PFAMs	Ribosomal_S8e
Model size	1093
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K14842
Hectar predicted targeting category	other localisation
GOs	GO:0000460,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
Exons	8
Evalue	8.55e-173
EggNOG OGs	COG2007@1\|root,KOG3163@2759\|Eukaryota
Description	maturation of LSU-rRNA
Cds size	783
COG category	J
BRITE	ko00000,ko03009

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5907.1.2	prot_P-wetherbeei_contig5907.1.2	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig5907 368..3590 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186873.355679-UTR-P-wetherbeei_contig5907:119..367	1683186873.355679-UTR-P-wetherbeei_contig5907:119..367	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig5907 120..367 -
1683186873.447488-UTR-P-wetherbeei_contig5907:3590..3652	1683186873.447488-UTR-P-wetherbeei_contig5907:3590..3652	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig5907 3591..3652 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186873.366982-CDS-P-wetherbeei_contig5907:367..653	1683186873.366982-CDS-P-wetherbeei_contig5907:367..653	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 368..653 -
1683186873.3777328-CDS-P-wetherbeei_contig5907:1201..1271	1683186873.3777328-CDS-P-wetherbeei_contig5907:1201..1271	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 1202..1271 -
1683186873.3924332-CDS-P-wetherbeei_contig5907:1688..1746	1683186873.3924332-CDS-P-wetherbeei_contig5907:1688..1746	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 1689..1746 -
1683186873.4010603-CDS-P-wetherbeei_contig5907:2021..2090	1683186873.4010603-CDS-P-wetherbeei_contig5907:2021..2090	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 2022..2090 -
1683186873.4097111-CDS-P-wetherbeei_contig5907:2529..2638	1683186873.4097111-CDS-P-wetherbeei_contig5907:2529..2638	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 2530..2638 -
1683186873.4188375-CDS-P-wetherbeei_contig5907:3003..3123	1683186873.4188375-CDS-P-wetherbeei_contig5907:3003..3123	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 3004..3123 -
1683186873.428393-CDS-P-wetherbeei_contig5907:3416..3484	1683186873.428393-CDS-P-wetherbeei_contig5907:3416..3484	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 3417..3484 -
1683186873.4381032-CDS-P-wetherbeei_contig5907:3587..3590	1683186873.4381032-CDS-P-wetherbeei_contig5907:3587..3590	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5907 3588..3590 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig5907:120..3652-
coding sequence from alignment at P-wetherbeei_contig5907:120..3652-

protein sequence of mRNA_P-wetherbeei_contig5907.1.2

>prot_P-wetherbeei_contig5907.1.2 ID=prot_P-wetherbeei_contig5907.1.2|Name=mRNA_P-wetherbeei_contig5907.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
MPQHEYMEQHRKRHGERLDRAEKRRKKEAREVHKRSEFAQKVHGLRAKLY
QQKRYKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAK
VLSNTVKQKRKEKAGKWDVPIPKVKPVSDDEMFKVLRSGKRKNKSWKRMV
TKVTFVGEGFTRKAPKYERFIRPSALRFKKAHVTHPELQATFHLDILGVK
KNPSSPLYTQLGVITKGTVIEVNVSDLGLVTQSGKVVWGKYAQVSNAPEL
DGCINAVLLV*

mRNA from alignment at P-wetherbeei_contig5907:120..3652-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig5907.1.2 ID=mRNA_P-wetherbeei_contig5907.1.2|Name=mRNA_P-wetherbeei_contig5907.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3533bp|location=Sequence derived from alignment at P-wetherbeei_contig5907:120..3652- (Phaeothamnion wetherbeei SAG_119_79)
GTTGCTCGCCGAGACAGTTCGATAGAGTCTAGCCGTTATTCGGGCAACGC
CCGGCACCAACCATGGTAAACTCCTTCAACCAAGACCGGGAGTTTGTACG
GCTGCATGGAGGCCTCACCTTCTTCGTCTCCCCTTCCTCCTCTTGAATCA
CTGAACTAATGACTACAGCCTCAGCATGAGTATATGGAGCAGCATCGCAA
GCGCCATGGCGAGCGCCTCGACCGTGCGGAGAAGAGGTGCGATTGGGGTT
CTCGCTGCTCGAATGCTGTTATCTCCTTCGCCTCCCATAAGATGCGTTGT
GCCTTGTTTTGCATAATTTCATTTGCGCTAGAAAGAAGCAGGTGTTGCCC
TGGCGGATCGGGGCTGTGTTGCATATATTTCAATTCTCCGTTGCCAGATC
CCAGCACTGCTCCTGGTCGCCCCATCAGCAGTAGCGAAAACGGATAGCAT
ATCTATAGGCAGAGAAAACCGAAGCTCGTCTTGTTGTTTGACTTTCTTGC
TCGTACTTGTTTTCTTCCTTTGTCGGCAGGCGAAAGAAAGAGGCACGCGA
GGTGCACAAGCGCTCGGAGTTTGCGCAGAAGGTGCACGGCCTCCGCGCCA
AGCTCTACCAGCAGAAGCGCTACAAGGAGAAGGCCACCATGCGCAAAACG
TTAGTTGTCCTTTCTCTAGTTTTCTTTCCTTTGGTCGGACATTCGGGGAC
ATCCGAGTGGCCTTTCCCTCCAACCTTCTCGTTGCATCGGCATTATCCCG
GTTCTCGTTGCGCGGTTTTCCGCCAATGAAGCTGCGCTGTCTCGGAGACT
GCGTTTTCCACTCCTGCGTTCTCCTTCCGTGCTGAGCCTTGCCTGCTTTT
TTTCTCCCGATGTGTCTGTCACACGCCTTCTTATCTGTCTCTCTCCTCTT
CTCGTCTTTCCACGCCCCATCGTATCCTCGGACCCCCTCCTCCGCGGCTG
GCTGCCGGCCTACCGTTGTCGCCGACGCTGCGGTGGCGCGGCAACGGGCG
ACGGACTTTTGCAGCATTGCGATGCACCAGGAGCGGACCAACAAGCACGC
CAACGACGACGCCGTGCCGGATGGCGCCGTCCCCGCCTACCTGCTCGACC
GCGAGGGCGTGTCTCGGGCAAAGGTGCGGCCGTATCACGCATTTCCTGGT
TTTCTTTTCATTTTCCAGAGCGCGAATCTGAGCGTGCATGGATTTGCTAT
GCGACAGAGGAATCGCCCGTGAGCGAGGGCTACCTAGGTTTGGCGGTGGT
GGCGGCGGCGGCGGCGGTGGTGGCAGCGGTGCTGGTGGGTGTATTGGCGC
CGGGCTCGGGCGCTGCAAGTTTAGTTCCTGCTTGATGAAAGTAATGGCAA
ACTCTTACCATATTTCCTACAGTCAGTCCTTAGATGCAAACCGTCATTGA
CTGTAGAGCATTGCTTTGAAAGGGTTATCCTTTCTCGTCGCTTGGGACTG
ATCTTGTCTTGTTCGGTGCTGTGAGCCTAATTTTTTCCCTTCCTACTCGC
CGCCGCTCTGCTCCATTCTGGCGGCGCCTGCCCGACTCCGAACCGACGTT
GTGTGCTGGCAGGTGCTCAGCAACACGGTCAAGCAAAAGCGGAAAGAGAA
GGCCGGCAAGTGGGACGTTCCCATCCCAAAGGTGATCGAGCGATATGTAT
CCCTCGGCGTGGGATCATGAGATCTGAACTTGGGCTTTTCTTTTCTTTTC
CGTCGTGTCGTTTTTACGTTTTATGTTTCGTTCTGTCTGCTTCTTACAGC
AGTTGGTCCTGCTTTCCCCCTTTTTTGCGTATGCTGCACGGCGTTTGAGG
AGTGTTCGAAAGAAACGTTGTGGGTGGTTGTTGTTGGCTGGTATAAAAAG
GCGCTGCCGCTGAAACAAATGCCTTTCTTTTGATGCGGTTTTCTGTTGTA
TGGCAGGTCAAGCCGGTGTCGGACGACGAGATGTTCAAGGTGCTGCGGAG
CGGCAAGAGAAAAAGTGAGTCTACTCAGTTCCCCTGACTGTGACTTGAAC
TCCCGGGTCAATATTTCGAGTCTTTTGCCCGCGTTTTATGGTGTTTGTAG
CAATTAGTTTTAAGAAGTTAGTTTTCCTTTCGGGGTGGCTGTGCCGCATA
GCATTGGAGCCGCCTGGCATGCGTTTTGTGCAGCGTTTGCCTTCCCTAGG
GCTCTTTCCTGAGAAAGGGAAGGAAGGTTGCGCAGGCTGAAATTCGGCAA
TGGTTGGGCGGCACACGTTCCCCCCCTGGTGGTGCATCGCGCCGCGCCGT
CCAAGCTGCTCGCACCCGGTGCACGAAAGAGCTCGTGCGGCGCTGTCTAA
AGCTGTGCAACGTGAATGCTTTGTCGGATACTGATGACCCTCTTTTCTGT
CGCCGTCTTATCGCCTTTCTTTGCGTTGCAGACAAGTCGTGGAAGCGCAT
GGTCACCAAGGTGACCTTCGTCGGGGAGGGTTTCACAAGAAAAGCGCCCA
AGTGAGTCAAGTCAGTCGGTCTGTCGATTGCGCTCGCAATCTCCACTTAG
GTTGATTTTGGCTGGCGGAGCACACAGTCGCTTTTAGGTCTGGCTTTCTT
ATCGTGTCGCCCTTTCTTCTTTCATGGCCTTGGAAGCTTTGCGGACCGGT
CTCCTTTTGTTGAAGGTTGTAGAGATTTTTTCCAGCGATGCAACGCCGGC
GGCGGTTGGCTGCAGGCGGTGAATAGCGGAAGTTCCAACTATATTTAATA
TTGAGGCTTCCAGATCCGGAAGAGCTGACTTCTCTTAAGCGCCTCTAATG
CCTGCACACCTAGCCTTTATAAATCTATGGGGCAGGTATTGGGTGCCCGG
GCCCGCCCACACCCAACCCCTCCCAAAACAAAAAGGTCGCCGCACTTTTA
AATTTACGGCGGAGGCGGGCGGCTGGCATGCCCGGCGCTGACCAGGCCAC
CGCCCCGTTTTATTGCTGACATCCCGCCGCCGCCCGAACACACTCTTAAC
GAACCGGAAAACGCCCCAAACCCCAAACGATTAATCCAAAACGCGGTAGG
TACGAGCGCTTCATTCGGCCGAGCGCGCTGCGCTTCAAGAAAGCGCACGT
GACTCACCCGGAGCTGCAGGCGACGTTCCACCTCGACATCCTCGGCGTCA
AGAAAAACCCTTCGTCGCCGCTCTACACGCAGCTCGGCGTAATCACCAAG
GGCACGGTGATCGAGGTCAACGTCAGCGACCTGGGGCTCGTGACGCAGAG
CGGCAAGGTGGTGTGGGGCAAGTATGCCCAAGTGTCTAACGCACCGGAAC
TTGATGGGTGTATAAACGCAGTGCTGCTAGTCTGAGACAGCTGTGCAGAG
CGCTGGGGCGGGCGTGGGGGGCCGTCGCCGCTGCTTTTTGGCTGCTTCTG
CCTTTCCTGCCCGTCTAATACACGATGATGACGACGCTGATTGAGAGCAG
GACGGATCTGTTGCGGGGTTTGGCGGGTGCAGCGGACGGCAGCGGCTGCG
TTTGTTTTCCCTGTGAGAGGATGGTGGCATAAATGTCGCTGTGCTGGAGT
GGAAGGAGAAGTGGCGGCGTAAAAGCACGCGGC

Coding sequence (CDS) from alignment at P-wetherbeei_contig5907:120..3652-

>mRNA_P-wetherbeei_contig5907.1.2 ID=mRNA_P-wetherbeei_contig5907.1.2|Name=mRNA_P-wetherbeei_contig5907.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig5907:120..3652- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTCAGCATGAGTATATGGAGCAGCATCGCAAGCGCCATGGCGAGCG
CCTCGACCGTGCGGAGAAGAGGCGAAAGAAAGAGGCACGCGAGGTGCACA
AGCGCTCGGAGTTTGCGCAGAAGGTGCACGGCCTCCGCGCCAAGCTCTAC
CAGCAGAAGCGCTACAAGGAGAAGGCCACCATGCGCAAAACCATTGCGAT
GCACCAGGAGCGGACCAACAAGCACGCCAACGACGACGCCGTGCCGGATG
GCGCCGTCCCCGCCTACCTGCTCGACCGCGAGGGCGTGTCTCGGGCAAAG
GTGCTCAGCAACACGGTCAAGCAAAAGCGGAAAGAGAAGGCCGGCAAGTG
GGACGTTCCCATCCCAAAGGTCAAGCCGGTGTCGGACGACGAGATGTTCA
AGGTGCTGCGGAGCGGCAAGAGAAAAAACAAGTCGTGGAAGCGCATGGTC
ACCAAGGTGACCTTCGTCGGGGAGGGTTTCACAAGAAAAGCGCCCAAGTA
CGAGCGCTTCATTCGGCCGAGCGCGCTGCGCTTCAAGAAAGCGCACGTGA
CTCACCCGGAGCTGCAGGCGACGTTCCACCTCGACATCCTCGGCGTCAAG
AAAAACCCTTCGTCGCCGCTCTACACGCAGCTCGGCGTAATCACCAAGGG
CACGGTGATCGAGGTCAACGTCAGCGACCTGGGGCTCGTGACGCAGAGCG
GCAAGGTGGTGTGGGGCAAGTATGCCCAAGTGTCTAACGCACCGGAACTT
GATGGGTGTATAAACGCAGTGCTGCTAGTCTGA