mRNA_P-wetherbeei_contig5901.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: D8LMW1_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW1_ECTSI) HSP 1 Score: 227 bits (579), Expect = 8.200e-60 Identity = 281/790 (35.57%), Postives = 352/790 (44.56%), Query Frame = 1
Query: 1 RSSSRQASDSADPLFKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQNLMADAG-----------------CTGDGGR--------------------------------------NG----------SAATTPTASPPTRNTS---APSIL-------------VARENGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGWTLAEGCSQKEGVVR-SRRGS--------VTPPPPKRHG-AILPAAPVEAGPQSLPGSPAARMHHNIVTVAAPLEGLQEAAVAAAAAAELPRSRVEPGSGGSAEARDKQAFTSPTLSSPPSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KANRAAFERAAEHEA-AQALVVTAEFPVSVKDFWHAFMADDAPYGLHNFHLTRGDWDVDASLWQPAAAAASADGVAAPXXXXXXXXXXXXXXXXXGTAIGTGKDMGRALRFKTPLNLSFMAGPSQVRTCKQQRCRVFGGAGFIVDTLTTVEDRIPLSDHFGVEDRWLLQPAGDSGG-------RCRATVRWRCVWHKFTMIRGLIEAKCKGDVRSFNEAFVRGMAEHLAGRAAGPGGLSRARSLQAMALAAG 2064
R S+ A + D +E + +FGDVG L+RDFSCAWD+K ++HGRMY+T+ LCFY+ + LE+K+ L +E+++RCSK NS + IPN +++Q+ K ++FR FWERD+C +L++ L +AG GDGG NG SAAT P SPP + APS L R XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX +++ G +VR S GS PP P + G A+L A LP XXXXXXXXXXXXXXXXXXXXX +A+R A E A + A V TAEF VSVK+F+ F+ADDAPY L +FH++RGDW+VDA WQ G AA XXX G G + RA+RFKTPL+++FM+ P VRT K+QR RVFGG G IV+T TTVEDRIPL+D+F VEDRW+++PA D G RC ATV WRCVWHKFT+I+GLIE KC+ DV+SFN AF++GM EHL + G G+ R SL+ L+ G
Sbjct: 47 RGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKMLLQEADGDGGEDDRLLPPSGAPPDAAPGAGAGRRASSWDGEASRPAFQSNGGIGYPLLEDLSAATAPPVSPPPASVYQKLAPSALPRESSSXXXXEVSFGRRTRVRHSVSPXXXXXXXXXXXXXXXXXXXXXXXLPTSPRAMSXXXXXXXXXXXXXXXXXXXYSMTPGXXXXXXMVRASTIGSSCXXXXXXXVPPRPAKLGLAVLGAD------HDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAVEGAAESAKKAARTSGLEHREVGGNGGGVDGEVSEGKVQEQKEGEKDKQQAPEAGGRKAGLVRQGSKLWNMMRWDSGGRAGGAGDGGVDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDAGEWQHTTKEGEGGGGAA-------GSTKGDXXXLRGPRPPGGGGVTRAIRFKTPLHITFMSSPGHVRTLKRQRSRVFGGQGCIVETQTTVEDRIPLNDNFHVEDRWIIRPAADDEGSGTGGKPRCTATVTWRCVWHKFTVIKGLIEGKCRADVKSFNIAFLQGMREHL--ESEGARGIKRCPSLRDALLSVG 821
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: A0A6H5KHE3_9PHAE (VASt domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE3_9PHAE) HSP 1 Score: 223 bits (568), Expect = 3.240e-58 Identity = 138/252 (54.76%), Postives = 170/252 (67.46%), Query Frame = 1
Query: 1333 KANRAAFERAAEHEA-AQALVVTAEFPVSVKDFWHAFMADDAPYGLHNFHLTRGDWDVDASLWQPAAAAASADGVAAPXXXXXXXXXXXXXXXXXGTAIGTGKDMGRALRFKTPLNLSFMAGPSQVRTCKQQRCRVFGGAGFIVDTLTTVEDRIPLSDHFGVEDRWLLQPAGDSGG-------RCRATVRWRCVWHKFTMIRGLIEAKCKGDVRSFNEAFVRGMAEHLAGRAAGPGGLSRARSLQAMALAAG 2064
+A+R A E A + A V TAEF VSVK+F+ F+ADDAPY L +FH++RGDW+VDAS WQ G A XXXXXXXXXXXXXX + RA+RFKTPL+++FM+ P VRT K+QR R FGG G IV+T TTVEDRIPLSD+F VEDRW+++PA D G RC ATV WRCVWHKFT+I+GLIE KC+ DV+SFN AF++GM EHL + G G+ R SL+ L+ G
Sbjct: 573 EADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTTEEGEGGGGATGSTKXXXXXXXXXXXXXXXXXVT------RAIRFKTPLHITFMSSPGHVRTLKRQRSRFFGGQGCIVETQTTVEDRIPLSDNFHVEDRWIIRPAADDEGSGSAGKPRCTATVTWRCVWHKFTVIKGLIEGKCRADVKSFNIAFLQGMREHL--ESEGARGIKRCPSLRDALLSVG 816
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.890e-25 Identity = 51/110 (46.36%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 25 DSADPL-FKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQ 351
D DP ++++++R +FGDVG++ RDFSCA + K L+HGR+Y+T+ F+CFYS E K+ + Y +++ +K N+ + IPNAI + R K Y+FR+FW+RDDCFNL++
Sbjct: 38 DKQDPAAWRDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHVTCVTKENTAVFIPNAIAVITAR-KEYVFRSFWDRDDCFNLLR 146
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: A0A7S3NLX8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLX8_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.220e-22 Identity = 44/105 (41.90%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 43 FKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQNL 357
++++++R +FGDVG++ RDFSCA + K L+HGR+Y+T+ F+CFYS E K+ + Y ++ +K + + IPNAI + R K YIFR+FW+RD+C+++++ +
Sbjct: 149 YRDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSYITCITKEYTAVFIPNAIAVITAR-KEYIFRSFWDRDECYDVLKQM 252
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: F0Y4G3_AURAN (GRAM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4G3_AURAN) HSP 1 Score: 95.5 bits (236), Expect = 3.500e-20 Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 94 RDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLI 348
RDFSCA + K L+HGR+Y+T+ F+CFYS E K+ + Y +++ +K + + IPNAI + R K Y+FR+FW+RDDCF+L+
Sbjct: 1 RDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHITCITKEYTAVFIPNAIAVITAR-KEYVFRSFWDRDDCFDLL 84
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI) HSP 1 Score: 106 bits (265), Expect = 3.710e-20 Identity = 49/119 (41.18%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 22 SDSADPLFKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQNLMADAGCT 378
SDSA ++E ++R +FG+VG + DFSCA +++ L+HGRMY+T F+CFYS E + + + ++ +K + L IPNAI I + K YIFR+FW+R+D F ++ DA T
Sbjct: 11 SDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSK-KEYIFRSFWDREDAFKTLKQCQQDASST 128
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.980e-20 Identity = 42/103 (40.78%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 43 FKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQ 351
++ +++R +FGDVG++ +DFSCA + K L+HGRMY+T +F+CFYS E K+ + Y +++ +K + + IPNAI + + + Y FR+FW+RD+ F+L++
Sbjct: 26 WRNEIVRTIFGDVGTIKKDFSCAVERKILLHGRMYVTDKFICFYSNLFGFEKKIKIPYSHIACVTKEYTAVFIPNAIAVITAK-REYFFRSFWDRDEAFHLLK 127
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE) HSP 1 Score: 105 bits (263), Expect = 7.210e-20 Identity = 49/119 (41.18%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 22 SDSADPLFKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQNLMADAGCT 378
SDSA ++E ++R +FG+VG + DFSCA +++ L+HGRMY+T F+CFYS E + + + ++ +K + L IPNAI I + K YIFR+FW+R+D F ++ DA T
Sbjct: 50 SDSATADYREDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSK-KEYIFRSFWDREDAFKTLKQCQQDASNT 167
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: W7TDU9_9STRA (Gram domain-containing protein 1a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDU9_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.810e-19 Identity = 45/100 (45.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 43 FKEQVLRDVFGD-VGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCF 339
F+++++R +FG+ +G + D SCA ++K L+HGR+YIT +F+CFYS + E K+ + + + SK N+ L+IPN IIIQ K Y FR+FW+RD+CF
Sbjct: 100 FRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQT-HGKEYCFRSFWDRDECF 198
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Match: A0A7S1U683_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U683_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.260e-17 Identity = 34/104 (32.69%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 43 FKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYITQEFLCFYSTWNNLESKVVLAYENLSRCSKSNSVLVIPNAIIIQEGRDKTYIFRNFWERDDCFNLIQN 354
++ +V++ +FG+ G +L DFSC+ ++K +HG MY+T F+CFYS + E K++L Y+ ++ SK++ + + + I + + Y+FRNFW+R++ + ++++
Sbjct: 25 YRREVVKLIFGNAGLILSDFSCSVESKMTLHGHMYVTTRFICFYSNFFGYEKKILLPYKTINCISKTSDSVFLSPGVEISTAK-QGYVFRNFWDREEAYKILRD 127 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5901.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5901.3.1 >prot_P-wetherbeei_contig5901.3.1 ID=prot_P-wetherbeei_contig5901.3.1|Name=mRNA_P-wetherbeei_contig5901.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=688bp RSSSRQASDSADPLFKEQVLRDVFGDVGSLLRDFSCAWDNKTLVHGRMYIback to top mRNA from alignment at P-wetherbeei_contig5901:1572..3635+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5901.3.1 ID=mRNA_P-wetherbeei_contig5901.3.1|Name=mRNA_P-wetherbeei_contig5901.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2064bp|location=Sequence derived from alignment at P-wetherbeei_contig5901:1572..3635+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5901:1572..3635+ >mRNA_P-wetherbeei_contig5901.3.1 ID=mRNA_P-wetherbeei_contig5901.3.1|Name=mRNA_P-wetherbeei_contig5901.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2064bp|location=Sequence derived from alignment at P-wetherbeei_contig5901:1572..3635+ (Phaeothamnion wetherbeei SAG_119_79)back to top |