prot_P-wetherbeei_contig59002.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59002.1.1
Unique Nameprot_P-wetherbeei_contig59002.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length160
Homology
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: UPI0019BDB013 (GAF domain-containing protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019BDB013)

HSP 1 Score: 205 bits (522), Expect = 2.650e-58
Identity = 106/161 (65.84%), Postives = 127/161 (78.88%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLA-PDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            +N+KEIDLVTSFADQ AIAMENVRLFNET+EALEQQ ASA VL VIS SVSD APVFE+ILDSC+ LFATDQ+AI L   DD Q+H  ALRG AI  M   LP+P+EQT TG+A  E R ++IP+AAAM D+P T+R+ +   GNYS +FAP++W  +GIG
Sbjct:  717 FNQKEIDLVTSFADQTAIAMENVRLFNETREALEQQKASAEVLSVISSSVSDAAPVFERILDSCERLFATDQVAICLVHDDDAQVHAQALRGTAIHDMMSVLPQPVEQTATGKAFLEGRAIHIPNAAAMRDLPQTIRDAVGRIGNYSCVFAPMLWELRGIG 877          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: UPI001ACA9C8D (Non-motile and phage-resistance protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001ACA9C8D)

HSP 1 Score: 185 bits (470), Expect = 2.580e-51
Identity = 87/160 (54.37%), Postives = 124/160 (77.50%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            + +KE+ L+ +F +QA IA++N RLFNET+EALEQQTA++ VL+VIS SV+DTAPVF+KILDSCQ LFAT QL I+L  DDG +H  A RG A++ +TR+ P+P+++T+TG  IRERR V +PDA+A P    +V+E+ E  GN+S  + P++W ++G+G
Sbjct: 1239 FGDKELALLGTFTEQAVIALQNSRLFNETREALEQQTATSEVLRVISSSVADTAPVFDKILDSCQRLFATGQLGIFLLEDDGLVHAVAWRGEALEAVTRTFPRPLDETITGTVIRERRAVVVPDASAAPGTQRSVKEVYEQIGNFSCAWGPMLWEDRGVG 1398          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: UPI0019CE7DF1 (GAF domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019CE7DF1)

HSP 1 Score: 167 bits (422), Expect = 6.930e-45
Identity = 85/166 (51.20%), Postives = 114/166 (68.67%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRG------AAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            +++KEI L+  FADQA IA++N RLFNETKEALEQQTA+A VLQVIS SV+DT PVF KILDSC+ LFA + + IYL  +  ++H+   RG      AA QT+  + P+P+E T T  A+RERR V+ PD     D+P  +R +    GN+S  FAP++W  +G+G
Sbjct:  678 FSDKEIGLLKVFADQAVIAIQNARLFNETKEALEQQTATAEVLQVISSSVADTRPVFAKILDSCERLFAANGIGIYLIDEADRIHLGGFRGRGAVSRAATQTVNDTFPRPLEGTATAIAVRERRVVHFPDVREGTDVPEPLRRIAAQAGNFSIAFAPMLWEGRGVG 843          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: UPI001BA631D3 (GAF domain-containing protein n=1 Tax=Bradyrhizobium sp. JYMT SZCCT0180 TaxID=2807666 RepID=UPI001BA631D3)

HSP 1 Score: 160 bits (404), Expect = 9.400e-45
Identity = 79/160 (49.38%), Postives = 111/160 (69.38%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            + E  + L+ +FADQA IA+ENVRLFNET+EAL+ Q A++ VLQVI  S++DT PVFE+ILDS + L    Q++I+LAP DG LHVAA RG   + + +  P PIEQT   R + ERR V +PD     D+P ++R ++++ GN+S +  P++W  QGIG
Sbjct:  196 FAEHHVQLMQTFADQAVIAIENVRLFNETQEALKHQIATSEVLQVIGRSMTDTQPVFERILDSTERLLDCRQVSIFLAPGDGLLHVAARRGTGYEAIDKVYPLPIEQTSAPRVLGERRQVYLPDVMNGADVPSSIRRVVQVFGNFSVVITPMIWEGQGIG 355          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: UPI001BAB14EC (GAF domain-containing protein n=9 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAB14EC)

HSP 1 Score: 164 bits (416), Expect = 4.710e-44
Identity = 81/160 (50.62%), Postives = 113/160 (70.62%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            + E  + L+ +FADQA IA+ENVRLFNET+EAL+ QTA++ VLQVI  S++DT PVFE+ILDS + LF   Q++I+LAP DG LHVAA RG   + + +  P PIEQT   R + ERR V +PD     D+P ++R ++++ GN+S +  P++W  QGIG
Sbjct:  205 FAEHHVQLMQTFADQAVIAIENVRLFNETQEALKHQTATSEVLQVIGRSMTDTQPVFERILDSTERLFDCRQVSIFLAPGDGLLHVAARRGTGYEAIDKVYPLPIEQTSAPRVLGERRQVYLPDVMYGADVPSSIRRVVQVFGNFSVVMTPMIWEGQGIG 364          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: A0A536UMD3_9PROT (GAF domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536UMD3_9PROT)

HSP 1 Score: 157 bits (398), Expect = 4.790e-43
Identity = 82/161 (50.93%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPK-PIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            Y+  +  L+++ A    +A++N RLFNETKEALEQQTA+A VL+VIS SV+DTAPVFE ILDSC+ LFAT+QLA+ L  +DG+++ AA RG+A   + R +   P+E T TG++IRERRT++   A A     P VR+L E  G Y+A+++P++W  +GIG
Sbjct:  316 YDADDERLLSTIAANVGVALQNARLFNETKEALEQQTATAEVLRVISGSVADTAPVFENILDSCRRLFATEQLAVMLLREDGRVYPAAWRGSAFDGLVRDVGSMPVETTFTGQSIRERRTIHATQADAAAFANPDVRKLAEAVGPYTAVYSPMIWEWRGIG 476          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: A0A7Y2BRN6_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BRN6_9HYPH)

HSP 1 Score: 159 bits (403), Expect = 2.670e-42
Identity = 85/157 (54.14%), Postives = 106/157 (67.52%), Query Frame = 0
Query:    4 KEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            ++I L+ +FADQA IA+ENVRLFNETKE+LEQQ ASA +L VIS SV+DT PVFEKIL+SC+ LF  ++L + L  + G L VAA  G     +    P P E T  G AIRERR  N  D    PD PP +REL ++TG +S  FAP+VW  +GIG
Sbjct:  701 RQIALLKTFADQAVIAIENVRLFNETKESLEQQKASAEILSVISSSVADTQPVFEKILESCKLLFGGEELDVLLVDEQGMLQVAAYMGNFRDALMAGFPAPWEITPAGVAIRERRVANYSDVHNNPDTPPVLRELGKITGYHSVAFAPMVWEGRGIG 857          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: A0A520FYJ0_9BURK (GAF domain-containing protein (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520FYJ0_9BURK)

HSP 1 Score: 159 bits (402), Expect = 3.330e-42
Identity = 78/160 (48.75%), Postives = 113/160 (70.62%), Query Frame = 0
Query:    1 YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            ++++E+ L+ +FADQA IA++N R+FNETKEALEQQTA A VLQVIS S+ D  PVF+KIL+ CQ LF+  Q+ I L  DDG +H+ A RG+A + + +  P+PI++T  G A+     V+IPDA A P +P  +R++ E  G+Y+ + APL+W  + IG
Sbjct:  681 FSDQEVGLLKTFADQAVIAIQNARMFNETKEALEQQTAMAEVLQVISESMEDAQPVFDKILEGCQRLFSGSQMGISLIGDDGLVHLGAHRGSAREALEKFYPRPIDRTPIGLAMGGPGVVHIPDALAEPQLPAFMRQVAERVGSYAVMIAPLMWEGRNIG 840          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: UPI001BE65E8D (response regulator n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI001BE65E8D)

HSP 1 Score: 158 bits (400), Expect = 6.640e-42
Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
Query:    3 EKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            +++IDL+  FADQA IA+ENVRLFNET E LE+QTA+A VLQVIS S+ +  PVF+KIL+SCQ LF+  QL I L  DDG +H+ A RG+A + + R  P+ I+Q+  G A+     ++IPDA A PD+P  +REL+   GNY+ + APL W  + IG
Sbjct:  514 QRQIDLLQLFADQAVIAIENVRLFNETHETLERQTAAADVLQVISESMENPQPVFDKILESCQRLFSGAQLGISLIGDDGLVHLGAHRGSAHEALARFYPRRIDQSSIGAAMAGTEVLHIPDALAEPDLPSFMRELVAEMGNYAIMIAPLFWEGRNIG 671          
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Match: A0A1H4EZW9_9BURK (Histidine kinase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H4EZW9_9BURK)

HSP 1 Score: 158 bits (400), Expect = 6.650e-42
Identity = 81/158 (51.27%), Postives = 109/158 (68.99%), Query Frame = 0
Query:    3 EKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSVSDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRSLPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFAPLVWANQGIG 160
            +++IDL+  FA+QA IA+EN RL NET+E LE+QTA+A VLQVIS S+ +  PVF+KIL+SCQ LFA  QL I LA  DG +H+AA  G A   + R  P+PI+ +  G A+     +++PDA A P +PP +REL E  GNY+ + APL+W  Q IG
Sbjct:  545 QRQIDLLDLFAEQAVIAIENARLANETRETLERQTATAEVLQVISESMENAQPVFDKILESCQRLFAGTQLGISLAGGDGMMHLAAHSGPARDELERYYPRPIDHSPMGEAMAGPEVLHLPDALAEPQLPPFMRELAEHIGNYAVMLAPLIWEGQYIG 702          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59002.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019BDB0132.650e-5865.84GAF domain-containing protein n=1 Tax=Rhodoferax s... [more]
UPI001ACA9C8D2.580e-5154.38Non-motile and phage-resistance protein n=1 Tax=Bu... [more]
UPI0019CE7DF16.930e-4551.20GAF domain-containing protein n=1 Tax=Myxococcales... [more]
UPI001BA631D39.400e-4549.38GAF domain-containing protein n=1 Tax=Bradyrhizobi... [more]
UPI001BAB14EC4.710e-4450.63GAF domain-containing protein n=9 Tax=unclassified... [more]
A0A536UMD3_9PROT4.790e-4350.93GAF domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A7Y2BRN6_9HYPH2.670e-4254.14Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A520FYJ0_9BURK3.330e-4248.75GAF domain-containing protein (Fragment) n=1 Tax=V... [more]
UPI001BE65E8D6.640e-4251.90response regulator n=1 Tax=Variovorax paradoxus Ta... [more]
A0A1H4EZW9_9BURK6.650e-4251.27Histidine kinase n=4 Tax=unclassified Variovorax T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 14..159
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 1..28
e-value: 7.4E-8
score: 34.8
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 30..160
e-value: 7.4E-16
score: 60.2
IPR003018GAF domainPFAMPF01590GAFcoord: 56..155
e-value: 2.7E-6
score: 28.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59002contigP-wetherbeei_contig59002:23..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59002.1.1mRNA_P-wetherbeei_contig59002.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59002 23..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59002.1.1 ID=prot_P-wetherbeei_contig59002.1.1|Name=mRNA_P-wetherbeei_contig59002.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp
YNEKEIDLVTSFADQAAIAMENVRLFNETKEALEQQTASAAVLQVISHSV
SDTAPVFEKILDSCQHLFATDQLAIYLAPDDGQLHVAALRGAAIQTMTRS
LPKPIEQTVTGRAIRERRTVNIPDAAAMPDMPPTVRELLELTGNYSALFA
PLVWANQGIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029016GAF-like_dom_sf
IPR003018GAF