prot_P-wetherbeei_contig59000.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59000.1.1
Unique Nameprot_P-wetherbeei_contig59000.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length147
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig59000.1.1 vs. uniprot
Match: UPI00162A04AA (hypothetical protein n=1 Tax=unclassified Synechococcus TaxID=2626047 RepID=UPI00162A04AA)

HSP 1 Score: 61.6 bits (148), Expect = 6.170e-9
Identity = 38/118 (32.20%), Postives = 55/118 (46.61%), Query Frame = 0 
Query:   30 DVRWNVSSTVFGDFTCRGQRDMALYGTSERSGFVVMIQPSRRGAQPSCLVFATRGREQKSIRLATESLDFKDDVAFRNEVKAAAPD-LQPSKTCQGLALGDGETDSHHIYWNRAKKAF 146
            ++RW+VSS V+GDF+CRG    AL G +     V + +   R   P  L F+   R   S +L  + +  K             PD L+P   C  + + D E D+ +IYWN   K F
Sbjct:   62 NIRWHVSSVVWGDFSCRGLPQAALAGETAGVMHVAIFRTGPR-LPPDVLEFSVPLRSPTSSQL--QVIPLKRLARMARLAAGGFPDGLRPQAPCDAIRIDDSEVDAAYIYWNYNSKRF 176
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59000.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00162A04AA6.170e-932.20hypothetical protein n=1 Tax=unclassified Synechoc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59000contigP-wetherbeei_contig59000:61..501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59000.1.1mRNA_P-wetherbeei_contig59000.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59000 61..501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59000.1.1 ID=prot_P-wetherbeei_contig59000.1.1|Name=mRNA_P-wetherbeei_contig59000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MHRLSTAVLLFLLITVAYAAPQSLPEEIADVRWNVSSTVFGDFTCRGQRD
MALYGTSERSGFVVMIQPSRRGAQPSCLVFATRGREQKSIRLATESLDFK
DDVAFRNEVKAAAPDLQPSKTCQGLALGDGETDSHHIYWNRAKKAFQ
back to top