prot_P-wetherbeei_contig5900.1.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5900.1.3
Unique Nameprot_P-wetherbeei_contig5900.1.3
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length586
Homology
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI)

HSP 1 Score: 562 bits (1449), Expect = 8.310e-194
Identity = 291/566 (51.41%), Postives = 383/566 (67.67%), Query Frame = 0
Query:   20 SVVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 585
            S  + +FR FKL GL  R DA RA++R++ RE   D A+ A++  +K ++ER +L S+VVDV+TVS+VVADL+  +++L + S Q  +AF  PR+ +DP R TL +ED    KR MH  A ++ +M+R+RFL+ +QRVQR+ LF  P+I SSRRE+++L+ LD+LVG+   + +LGMLTQP+EG+Y LED  +++PLD S A +T G+FTEH VV+VEG+M  GV +V M+G PP EARE++L  LG  DLFG GV PQQ  R+ +L  +A DAMFVI+SDV+LD+P V++KL ALF GF    PPP FVLMGNF S+P++HA +SV Q    F +L  +I + P LA SA+FVFVPGP DPGAG+TLPRPPLP  FT +LRE +KH +FATNPCRLRF+ QEMV FR+D+L KMQRH++  PS PD      MD TEH                                             KTL  QGHLCPLPL+ RPI W+LD  L+LYPLPHVAVLAD  +QY+W  +   + NPGSF +D SF+VYRPAT  V+FS ++
Sbjct:    2 SSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPPSDPD------MDVTEHCT-------------------------------------------KTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA)

HSP 1 Score: 509 bits (1311), Expect = 7.740e-173
Identity = 275/566 (48.59%), Postives = 366/566 (64.66%), Query Frame = 0
Query:   21 VVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGA--GNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGAS-AFNPGSFQADFSFIVYRPATCEVDFSS 583
            +++ + + F+L GL    +A++A+I ++  E D   AL AV+  IKDK+ER +L+S+V+D   V++V  DLS  + +L   SL+ L+AF   R+ YDP RK+L  E        +HA   A+ +M RDR LL QQR QR++LF  PVIASSR++ ++LT+LD+L+G+ G K ++GMLTQP EG Y +EDLT QVP+D S AG TAGMFTE+ VVV EGEMVDG  R+ MMG PPPE R+ T   +G  DLFG G+T QQ   L  L   A ++MF++LSDVHLD+P V++KLR +F GF+ +  PP+FVLMG+F+S P++   ESV Q+A  F AL ++IAE P LA+ A FV VPGPNDP    G  LPR P+P  F   L E V +   AT+PCRLRFY QE+VLFR+D+  KMQRH ++ P  P D P  +MDA+EHLV                                           KTL DQGHLCPLPL+ RPI  Q D  L LYPLP V +LAD ++Q+ W+YH ++ A NPGSF +DFSF+VYRP++ +V+FSS
Sbjct:    3 LMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLEGDAEESMFILLSDVHLDKPAVMEKLRVIFEGFSDMPEPPLFVLMGDFSSAPINQTSESVAQMADKFDALGSLIAEFPALAQHANFVIVPGPNDPATIGGMALPRGPIPRYFAKGLVERVSNVHLATSPCRLRFYTQEIVLFRDDIFKKMQRHCIVPPKNPPDAP--NMDASEHLV-------------------------------------------KTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFSS 523          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 1.850e-128
Identity = 223/530 (42.08%), Postives = 308/530 (58.11%), Query Frame = 0
Query:   15 TQMDPSVVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADS 544
            T M   + K +   FK  G+SAR DA+RA+  +L REP+ D A+ +++                  + TV  VVA+L++D++++ +ES++      +P+  Y+  RKT +  D   G   +H  A     M+R+R+ L +QRV RN +F  PV+ SS+RE+ QLT L++L+G  GTK VLGML QP+EGRYC+ED +S+VP+D S A  T+G+FTE S+V+ +GE+ +G   V MMG PPPE R ++L  +G  D  G   TP +  ++  L   A  +MFVILSDVHLD P V DK++AL  GFA + P  V V MGNF S P  H  +     A +   LA +IA  P LA  ++FVFVPG +DPG G+ LPR P+P +FT ALR  V++  FA+NPCRLRFY+Q++VLFR DL+ KM+RH+V+ P+    T E     TEHLVR                                           T+ DQGHLCP+    +P+ W  DH L LYPLP VA+LADS
Sbjct:   42 TAMSARLAKKVHHAFKFRGMSARADAVRAVASVLQREPEPDEAMDSIIDXXXXXXXXXXXXXXXXXLATVEQVVAELTRDEEDIAQESIRVFQTADVPKFLYNAARKTFYKVDAPAG---LHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALEEEAEASMFVILSDVHLDNPRVFDKVQALLEGFADVVPD-VIVFMGNFISAPFGHGADDRRLYAENLTRLADLIAGYPSLANGSKFVFVPGLDDPG-GSVLPRAPIPAVFTKALRAQVRNVEFASNPCRLRFYSQDIVLFRHDLVSKMRRHAVVPPTDAHGTFEI----TEHLVR-------------------------------------------TVVDQGHLCPMAPTVQPVYWGKDHALRLYPLPQVAILADS 519          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A8K1CHQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ1_PYTOL)

HSP 1 Score: 386 bits (992), Expect = 1.180e-124
Identity = 228/569 (40.07%), Postives = 325/569 (57.12%), Query Frame = 0
Query:   23 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRR-EHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPES--VGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGA---VGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 585
            K + R  KL GLS  PDA+R L+  L  EP  +  L  V+  +K+ ++R  + SSVV +E + S +  L    +E   ES+Q  DAF  PR+ Y+        E      R +HA A +R Q+ RDRF L   RV+RNK+F  P I+ S   ++++L+ +++L+G  G + V+GML Q +  RY LEDLTS++ ++ + A  T G+FT + VV+VEGE++D +L VH MG PPPE++ E+  +LG  D  G  V+ QQ  ++  L      A F++LSDVHLD P V+  L  LF+G   + P  +F+LMG+F STPV     S  +  L  +   L  +I + P+LAE ++FV VPGPNDPG+    PR PLP+L T  L   V +    TNPCR+R+Y Q++V+FREDL  KM RH++L P  PD+  EA+ DA +                                V SG+  A   +   +VKT+ DQ HLCP+PL   PI W  D  + L+PLP V +L DS +QYQ  Y   + F+PG F  DFSF++YRP+T   +FS +E
Sbjct:    4 KQVLRACKLQGLSLHPDALRRLVDELTAEPTLE--LDNVVYALKNSIDRSKMTSSVVSLEALESALDTLLAVSEENQFESIQIFDAFTTPRLAYNSANS--LYELKADRHRSIHAPAESRLQLLRDRFQLIDLRVKRNKMFAPPAISVSNEVDYIELSKIESLLGVTGIRRVIGMLGQDERKRYYLEDLTSRIYIELNNATYTNGLFTLNCVVLVEGEVIDDLLHVHTMGFPPPESKAESKVILGGVDPLGVEVSAQQLEQIQALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS-LFILMGDFLSTPVGVGAGSNTLEDLKDYLDELGNLILKYPKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSLCTRDLVRKVPNVICTTNPCRIRYYTQDLVIFREDLHQKMHRHAIL-PVLPDEVTEANGDAMD--------------------------------VDSGNTHAHVDISKHLVKTIIDQSHLCPMPLMAAPINWAFDSAMQLFPLPDVLILGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 534          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: B8C9U5_THAPS (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U5_THAPS)

HSP 1 Score: 384 bits (985), Expect = 5.180e-124
Identity = 227/559 (40.61%), Postives = 321/559 (57.42%), Query Frame = 0
Query:   29 FKLNGLSARPDAIRALIRLLLREPDW--DRALSAVLGGIKDKLER---GDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSR---REHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQ-TAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLG--HTDLFGR--GVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRP 574
            FK+ GLS +  A+ +++ +L  EP    D  L A++  IK+K+     G +   VV  + +  VVAD+S+  K++ EE++Q LDAF  PR+ YD  RK   V  +V G + +   A  +  MF  R+ L  QR+ R  +F +P + ++R     H  LT +++L+G  G + +LGM+ Q +EG+Y LED TSQV L+FSQA   T G  TE+SVV+VEGE +DGVL VH MG P  E R +++  +G  +TD+F     ++  ++ R  E+ +   D MFV+LSDVHLD P V++K+  +  G++  +P P+FV MGNFTS P+S A +    + G+F  LAAVI + P +A   RFVFVPGPNDPG    LPR P+P  FT++LR  VKH  FA+NPCR+RF+++E+V FR+DL+ KM+RH +L P            ++ H +  F                                       VKT+ DQGHL PLPL+  PI WQ DH L LYP P   ++ D  DQY   Y    A NPG F A F+F+VYRP
Sbjct:    1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRK---VFSLVEGGKSVCGEAVDKVDMFSQRYSLIHQRILRQDIF-QPKLITARGGGTTHT-LTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEM-KHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSDFTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQPR-----------SSVHKLSQFA--------------------------------------VKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA)

HSP 1 Score: 379 bits (972), Expect = 2.020e-121
Identity = 228/585 (38.97%), Postives = 325/585 (55.56%), Query Frame = 0
Query:   27 RVFKLNGLSARPDAIRALIRLLLREPDW--DRALSAVLGGIKDKL----ERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRP--VIASSRRE------HLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAG-QTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLG--HTDLFGR--GVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPA--------TCEVDFSSI 584
            R FK+ GL+ +  A+ A++ +L RE        L  +L  IK+++        L   VV    +S VVAD+S+D  +  +E++Q LDAF MPR+ YD  RK   +      +R + A A  +  M+  R+ L QQR+ R  LF RP  V A  RR       H+ LT +++L+G  G K +LGM+ Q +EGRY LED T+QVP+D + A   T G  TE+ +V+VEGEMVDG+ +V  MG P  E R++ L  +G  +TD+F     +  Q++ R  E+ R   D  FVILSD+HLD P V +KL  +F  +  L+P P+FV MGNF+S P++ A E    +  +F  LA +I + P+LA+  RF+FVPGPNDPG G+ LPRPP+P  FT A+R  V H  F +NPCR+R+++QE+V  R+D++ K++R++++SPS  D   E      +H ++S                                           + DQGHL PLP +  PICWQ DH L LYPLP+  ++ D   Q    Y    A NPGSF +DFSF+VYRP           +V+FS I
Sbjct:   13 RAFKMRGLAVQASALDAMLNVLKRESPHTAQETLHMILDEIKERMMSSSNTSQLSQLVVTKRLLSDVVADMSRDGGDFTDEAVQLLDAFQMPRLAYDSMRKQFTLMTDSSEERSLFAEAPHKADMYAQRYGLIQQRILRQDLF-RPRLVTADGRRSDESNATHV-LTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEI-RHGQDGEFVILSDLHLDNPVVFEKLEKMFDAYQDLTPLPIFVFMGNFSSKPLTSAREGPKMMVSYFEELANLIGQYPKLAKEGRFIFVPGPNDPGMGSVLPRPPIPAFFTGAIRSKVPHANFVSNPCRMRYFSQEIVFCRQDIVNKLRRNALISPSNGDIDKEDEQRPVQHALKS-------------------------------------------MLDQGHLSPLPQSFSPICWQYDHALRLYPLPNALIVGDRVKQCYESYAECDAVNPGSFPSDFSFVVYRPVGECNGDEIKSDVEFSQI 551          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A662YDB3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDB3_9STRA)

HSP 1 Score: 373 bits (957), Expect = 2.620e-119
Identity = 227/571 (39.75%), Postives = 315/571 (55.17%), Query Frame = 0
Query:   23 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGD-----LKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIA-SSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAP--ESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 585
            K +FR  KL GLS   DA+R L   L  E   +  L  VL  +K+ ++R       L SSVV +E + S +  L     E + E +Q  DAF  PR+ ++       ++      RR+HA   AR ++ RDRFL    RV+RN+LF  P  A SS  EH++L+ +++L+G  G + V+GML Q +  R  LEDLTS++ +D + A  T G+FT + VV+VEGE++D VL VH MG PPPE +  +L VLG  D  G  V+ QQ  ++         A F++LSDVHLD P V+ +L  LF G   L P  +FVLMG+F S  +       S+  L  +   L  +I + P L E++RFV VPGPNDPG+    PR PLP L T  L   + + T +TNPCR+R+Y Q++V+FREDL  KMQRH++L P  P++  EA+                                       SG++  +   + KTL DQ HLCP+PL   PI W  D +L L+PLP V VL DS +QYQ  Y   + F+PG F  DFSF++YRP+T   +FS +E
Sbjct:    4 KRIFRACKLQGLSLHADALRRLTEELTDETSLE--LDDVLYALKNNIDRSKSAYATLTSSVVTLEALESALDTLLAVSAENEFEQIQVFDAFDTPRLHFNSHSNAYELK--ADATRRLHAGPEARLRLLRDRFLSVDLRVKRNRLFSAPTAAVSSSFEHIELSRIESLLGVTGVRRVIGMLGQDERKRMYLEDLTSRIVIDLTSAAYTDGLFTVNCVVLVEGEVIDDVLHVHSMGFPPPETKATSLDVLGGIDPLGVEVSSQQLEQIRVQEAEDHHATFIVLSDVHLDDPQVMKQLDKLFEGLESLQPT-LFVLMGDFMSASIGGGAGSNSLQDLREYLEELGNLILKYPGLVEASRFVLVPGPNDPGSSRAFPRHPLPELCTRELLRKLPNVTCSTNPCRIRYYTQDLVIFREDLHQKMQRHAILPPM-PEEEEEAAXXXXXXXXXXXA--------------------------LSGASVDISKHLAKTLIDQAHLCPMPLMACPINWDFDASLQLFPLPDVLVLGDSTEQYQLGYSAVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 542          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: H3GZH2_PHYRM (DNA polymerase epsilon subunit n=27 Tax=Phytophthora TaxID=4783 RepID=H3GZH2_PHYRM)

HSP 1 Score: 372 bits (954), Expect = 5.600e-119
Identity = 222/566 (39.22%), Postives = 316/566 (55.83%), Query Frame = 0
Query:   23 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIA-SSRREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAP--ESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 585
            K + R  KL GLS   DA+R L   L  E      L  V+  IK+ ++R  + +SVV +  + S +  L     E D E +Q   AF  PR+ ++    +  ++      RR+HA   +R Q+ RDRF+    RV+RN+LF  P  A ++  E+++L+ +++L+G  G + V+GML Q +  R  LED TS++ +D + A  T G+FT + VV+VEGE++D VL V  MG PPPE +E +L VLG  D  G  V+ QQ+ ++  L      A F++LSDVHLD P V+ KL  LF+G   + P  +F+LMG+F ST +       S+  L  +   L  +I + P +AE++RFV VPGPNDPG+    PR PLP L T  L   V +   +TNPCR+R+Y Q++V+FR+DL  KMQRH++L P  P +  EA+MD ++                              E  QS S   +   + KTL DQ HLCPLPL   PI W  D +L L+P P V +L DS +QYQ  Y     F+PG F ADFSF+ YRP+T   +FS +E
Sbjct:    4 KRVLRACKLQGLSLHADALRRLTDELTNESSLQ--LEDVIYAIKNNIDRSKMTTSVVTLGALESALDTLLAVSAENDFEQIQVFGAFDTPRLHFNTHNNSYELK--ADAHRRLHAGPESRIQLLRDRFMSVDLRVKRNRLFAPPSAALANTTEYMELSRIESLLGMTGLRRVIGMLGQDERNRMYLEDFTSRIIIDLTNAVYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKETSLEVLGGIDPLGVEVSAQQREQIRTLEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLDSVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEDLGNLILKYPGIAENSRFVLVPGPNDPGSSRAFPRHPLPDLCTRELVRKVPNVMCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPM-PSEHEEAAMDESD------------------------------EAGQSVSQTDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPTPDVLILGDSTEQYQLGYSSVGVFHPGPFHADFSFVFYRPSTNTTEFSRVE 533          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A833SQQ2_PHYIN (DNA polymerase epsilon subunit n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQQ2_PHYIN)

HSP 1 Score: 370 bits (950), Expect = 2.160e-118
Identity = 221/566 (39.05%), Postives = 318/566 (56.18%), Query Frame = 0
Query:   23 KDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASSRR-EHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAP--ESVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 585
            K + R  KL GLS   DA+R L   L  E      L  V+  IK+ ++R  + SSVV +E + S +  L     E D E +Q   AF  PR+ ++    +  +       RR+HA   AR Q+ R+RF+    RV+RN+LF  P  A +   E+++L+ +++L+G  G + V+GML Q +  R+ LED TS++ +D + A  T G+FT + VV+VEGE++D VL V  MG PPPE +E +L  LG  D  G  V+ QQ+ ++ EL      A F++LSDVHLD P V+ KL  LF+G   + P  +F+LMG+F ST +       S+  L  +   L ++I + P +AE++RF+ VPGPNDPG+    PR PLP L T  L   V + T +TNPCR+R+Y Q++V+FR+DL  KMQRH++L P+ P +  EA             +++G                   E V S S   +   + KT+ DQ HLCPLPL   PI W  D +L L+P P V +L DS +QYQ  Y     F+PG F AD+SF+ YRP+T   +FS +E
Sbjct:    4 KRVLRACKLQGLSLHADALRRLTEELNNEASLQ--LEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNMHNNSYDLR--ADTHRRLHAGPEARIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTIEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKEASLEGLGGIDPLGVEVSAQQREQIRELEASDHHAAFIVLSDVHLDDPLVMSKLDELFQGLESVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEELGSLILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPT-PSEQGEAM------------DEDG-------------------ETVHSVSQTDISKHLAKTVIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSIGVFHPGPFHADYSFVFYRPSTNTTEFSRVE 532          
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA)

HSP 1 Score: 368 bits (945), Expect = 9.180e-118
Identity = 217/570 (38.07%), Postives = 322/570 (56.49%), Query Frame = 0
Query:   20 SVVKDLFRVFKLNGLSARPDAIRALIRLLLREPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDEESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRFLLAQQRVQRNKLFCRPVIASS--RREHLQLTALDALVGARGTKVVLGMLTQPQEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMMGLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSDVHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPE--SVGQLAGHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAALRELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPEASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGAVIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQWRYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE 585
            +  K +FR FKL GL+   DA++ L+R +  +P     L  V+  IK+ ++R  L +SVV  E + S +  L     E D +++Q   A   P++ Y+   KT   E V    RR+HA    R  +FR+RF   ++RV+R+K F +PV+A++  +RE+L+LT +++L+G  G K VLGML Q +     LEDLT+++ ++  +     GM+T +SVV+VEG++ D V  V  MG PPPE R +++++LG  D  G  V+ QQ T++ EL  +   A FVILSDVHLD P V+ +L  LF G+A   P  +FVLMGNFTSTPV +  +  S+         LAA++ + P L E ++FV VPGP+DPGA + LPR PLP + T      +   T A+NPCR+R++ +++V+ R+DL  KM+R+ ++      D  + +   +  LV                                           KT+ DQGHLCPL L+ +PI W  D +L L+PLP V VLAD  DQ+Q  Y G +A +PG F  D+SF++YRPAT   + S I+
Sbjct:    2 AAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYINTDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGYAPFCPT-LFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKYPSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAADDEDRTTTVSRQLV-------------------------------------------KTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5900.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD49_ECTSI8.310e-19451.41DNA polymerase epsilon subunit n=1 Tax=Ectocarpus ... [more]
A0A835YQA3_9STRA7.740e-17348.59DNA polymerase epsilon subunit n=1 Tax=Tribonema m... [more]
A0A7S1GD26_9STRA1.850e-12842.08DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bic... [more]
A0A8K1CHQ1_PYTOL1.180e-12440.07Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
B8C9U5_THAPS5.180e-12440.61DNA polymerase II subunit 2 (Fragment) n=1 Tax=Tha... [more]
A0A7S4I565_9STRA2.020e-12138.97DNA polymerase epsilon subunit n=1 Tax=Odontella a... [more]
A0A662YDB3_9STRA2.620e-11939.75DNA polymerase epsilon subunit n=1 Tax=Nothophytop... [more]
H3GZH2_PHYRM5.600e-11939.22DNA polymerase epsilon subunit n=27 Tax=Phytophtho... [more]
A0A833SQQ2_PHYIN2.160e-11839.05DNA polymerase epsilon subunit n=1 Tax=Phytophthor... [more]
A0A1V9YX49_9STRA9.180e-11838.07DNA polymerase epsilon subunit n=1 Tax=Achlya hypo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 295..548
e-value: 1.4E-45
score: 155.2
IPR016266DNA polymerase epsilon, subunit BPIRSFPIRSF000799DNA_pol_epsilon_2coord: 16..585
e-value: 3.9E-141
score: 468.7
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 23..583
NoneNo IPR availableGENE3D1.10.8.60coord: 18..92
e-value: 1.3E-6
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5900contigP-wetherbeei_contig5900:717..3389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5900.1.3mRNA_P-wetherbeei_contig5900.1.3Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5900 579..3482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5900.1.3 ID=prot_P-wetherbeei_contig5900.1.3|Name=mRNA_P-wetherbeei_contig5900.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=586bp
MEVEYGQGQTNPAATQMDPSVVKDLFRVFKLNGLSARPDAIRALIRLLLR
EPDWDRALSAVLGGIKDKLERGDLKSSVVDVETVSSVVADLSKDDKELDE
ESLQYLDAFAMPRVTYDPQRKTLFVEDVVVGKRRMHALAAARPQMFRDRF
LLAQQRVQRNKLFCRPVIASSRREHLQLTALDALVGARGTKVVLGMLTQP
QEGRYCLEDLTSQVPLDFSQAGQTAGMFTEHSVVVVEGEMVDGVLRVHMM
GLPPPEAREETLSVLGHTDLFGRGVTPQQQTRLAELGRRAADAMFVILSD
VHLDRPDVLDKLRALFRGFAGLSPPPVFVLMGNFTSTPVSHAPESVGQLA
GHFAALAAVIAETPRLAESARFVFVPGPNDPGAGNTLPRPPLPTLFTAAL
RELVKHTTFATNPCRLRFYAQEMVLFREDLLFKMQRHSVLSPSGPDDTPE
ASMDATEHLVRSFGEKEGDVQLPSFYFVNLHPPSQAREVVQSGSAGAVGA
VIVKTLFDQGHLCPLPLAGRPICWQLDHTLALYPLPHVAVLADSADQYQW
RYHGASAFNPGSFQADFSFIVYRPATCEVDFSSIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR016266POLE2