mRNA_P-wetherbeei_contig590.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A835YXQ7_9STRA (SAS-6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ7_9STRA) HSP 1 Score: 323 bits (828), Expect = 3.910e-107 Identity = 160/220 (72.73%), Postives = 189/220 (85.91%), Query Frame = 3
Query: 141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRSATFG---GAGA*FR 791
+ +++ I+++DPS ADGF+ VYDREVPFELRVQ+ A GPQH+GTLEAIKVKVL LGD A PQ VRVELSSEADLFFH+MHV D+ A+ AMQEQQ+L +DF DYP +LIR+LN CI+EPH+HLAV VM H+ ARLDFIQNMEYKF+EL+SL F+RSPEDVVQHQITYRYNAMKSRLALM ARLQD+NNLVKLKNPSLLLQLQ+++ FG G+G+ R
Sbjct: 1 MQTFEYTSIEDMDPSVADGFRIVYDREVPFELRVQDGADGPQHVGTLEAIKVKVLVLGDGALPQGVRVELSSEADLFFHYMHVVDEGAFAAMQEQQRLTLDFADYPAVLIRMLNQCIREPHSHLAVYVMQHELDARLDFIQNMEYKFIELLSLHFTRSPEDVVQHQITYRYNAMKSRLALMQARLQDVNNLVKLKNPSLLLQLQKTSGFGSPLGSGSPLR 220
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: D7FKW8_ECTSI (SAS-6_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW8_ECTSI) HSP 1 Score: 322 bits (825), Expect = 7.870e-107 Identity = 157/205 (76.59%), Postives = 181/205 (88.29%), Query Frame = 3
Query: 138 DVANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQ 752
++ DF I+E+DPS ADGF+ +YDREVPFELRVQE+A GPQ +GTLEAIKVKVL LGD A PQ+VRVELSSEADLFFH+ H DD ++Q MQE+QKLMV+F DYPN+LIR+LN+CIKEPH+HL V VM HD +ARLDFIQNMEYKFVELMSLQ++RS ED+VQHQITYRYNAMKSRLALM ARLQ++NNLVKLKNPSLLLQLQ
Sbjct: 4 ELQTCDFGAIEEMDPSIADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDAAPQSVRVELSSEADLFFHYTHSIDDASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSAEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 208
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A6V2Z9A0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Z9A0_HETAK) HSP 1 Score: 300 bits (768), Expect = 7.960e-98 Identity = 144/208 (69.23%), Postives = 177/208 (85.10%), Query Frame = 3
Query: 141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRSAT 764
+ +DF+ I+E+DPS DG + +YDREVPFELRVQ++A GPQ +GTLEAIKVK+L LG+ A P +VRVE SSEADLFFH+ H D +Q +QEQQ+LMV+FPDYPN+LIR+LN CI+EPHAHLAV VM D +ARLDFIQNMEYKFVELM+ F+RS E+VVQ+QITYRYNAMKS+LALM +R+Q++NNLVK+KNPSLLLQLQRS +
Sbjct: 27 MQTLDFTSIEEMDPSIEDGHRIIYDREVPFELRVQDSADGPQQVGTLEAIKVKILILGEDAAPSSVRVECSSEADLFFHYTHQLDSQGFQVVQEQQRLMVEFPDYPNVLIRMLNACIQEPHAHLAVFVMQRDVAARLDFIQNMEYKFVELMTCHFARSTEEVVQYQITYRYNAMKSKLALMQSRMQEVNNLVKMKNPSLLLQLQRSGS 234
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S1XUL9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL9_9STRA) HSP 1 Score: 292 bits (748), Expect = 8.720e-95 Identity = 142/210 (67.62%), Postives = 171/210 (81.43%), Query Frame = 3
Query: 129 AEGDVANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
A D+ D S I+E+DPS A+GF +YDREVPFELRVQ+ GP +GTLEAIKVK+L GD A P AVR+ELSSEADLF+H+ H+ D+ +Q +QEQQKLMV+F DYPN+LIR+LN+CI+EPH HLAV VM D +ARLDFIQNMEYKFVELMS F+RS E+ VQH ITYRYNAMK+RLALM ARL ++ N++KLKNPSLLLQLQR+
Sbjct: 8 AAADLQTFDMSAIEEMDPSCAEGFNVIYDREVPFELRVQQNQDGPSQVGTLEAIKVKILLQGDDARPSAVRIELSSEADLFYHYAHLIDEAGFQVVQEQQKLMVEFADYPNVLIRMLNNCIREPHNHLAVFVMQQDGTARLDFIQNMEYKFVELMSCHFARSSEESVQHHITYRYNAMKTRLALMQARLTEVQNVIKLKNPSLLLQLQRN 217
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S2UUP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUP1_9STRA) HSP 1 Score: 287 bits (735), Expect = 8.900e-93 Identity = 141/214 (65.89%), Postives = 172/214 (80.37%), Query Frame = 3
Query: 141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRSATFGGAGA 782
+ +DFS I+E+DPS DG + +YDREVPFE+R+Q++A PQ +GTLEAIKVKVL LGD A P++VR+ELSSEADLFFH+ H D ++ +Q+QQ+LMV+FPDYPN+LIR+LN+CIKEPH+ LAV VM D ARLDFIQNMEYKFVELM+ F SPED VQ ITYRY +MKSRLALM RLQ++NNLVK+KNPSLLLQLQRS + A
Sbjct: 24 MQTLDFSAIEEMDPSVVDGHRVIYDREVPFEVRLQDSAEAPQQVGTLEAIKVKVLLLGDDANPESVRIELSSEADLFFHYYHQLDLTGFKTVQDQQRLMVEFPDYPNVLIRMLNNCIKEPHSCLAVFVMQQDVHARLDFIQNMEYKFVELMTCHFVHSPEDSVQRHITYRYKSMKSRLALMQNRLQEVNNLVKMKNPSLLLQLQRSGASSASTA 237
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S3KUF3_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KUF3_EUPCR) HSP 1 Score: 269 bits (687), Expect = 1.130e-85 Identity = 127/203 (62.56%), Postives = 165/203 (81.28%), Query Frame = 3
Query: 150 IDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
DF IDE+DPS ++G + VY+REVPFELR+Q+ GPQ +GTLEAIKVK+L LG+ P+ ++VELSSE D+FFH+ H ++ ++ +QE QKLMVD+PDYPN+LI++LN CIKEPH+ LAV +M D SARLDFIQNMEYKFVEL+S F S E+ ++ QIT+RYNA+KS+LA+M ARLQDIN +VK+KNPSLLLQLQ++
Sbjct: 14 FDFQAIDEMDPSLSEGHRIVYEREVPFELRIQDGDTGPQEVGTLEAIKVKILVLGEDGNPEQIKVELSSENDMFFHYTHNIEELSFSKVQESQKLMVDYPDYPNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSCDFDASTEETIRQQITFRYNAVKSKLAIMQARLQDINAIVKVKNPSLLLQLQKA 216
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S3PI88_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI88_9STRA) HSP 1 Score: 269 bits (687), Expect = 2.200e-85 Identity = 129/205 (62.93%), Postives = 164/205 (80.00%), Query Frame = 3
Query: 141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQR 755
+ NIDFS I+ELDPS +DG++ +YDRE P ELR QETA PQ +GTLEAIKVK+L G + P++V++ELSSE DLFFHF HV D+ ++ MQ+QQKLM+DF +YP +LIR+LN+CIKEPH+HLAV V+ +RLDFI+NMEYKFVEL++ F RS + +V+ I YRYNA+KSRLALM ARL D+N LVK+KNPSLLLQ+ R
Sbjct: 35 LTNIDFSAIEELDPSLSDGYRIIYDRECPVELRFQETAESPQEVGTLEAIKVKMLVTGKDSSPESVKIELSSECDLFFHFTHVVDEVGFRIMQQQQKLMIDFVEYPKVLIRMLNNCIKEPHSHLAVFVIQRSGHSRLDFIKNMEYKFVELLTCNFVRSSDALVKQHIAYRYNAVKSRLALMQARLSDVNALVKIKNPSLLLQINR 239
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S1X654_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X654_9CHLO) HSP 1 Score: 268 bits (684), Expect = 4.940e-85 Identity = 131/204 (64.22%), Postives = 166/204 (81.37%), Query Frame = 3
Query: 147 NIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
N+DF+ +D+LDPS ADGF Y+REVPFELR E + P +G LEAI+VKVL LGD P+A++VELSSE++LFFH++H +++ +QE QKLMVDF +YP +L+R+LNHCIKEPH++LAV VMH + ARLDFIQNMEYKFVEL+S +F SP++VV+ ITYRYNA+KSRLALM ARL D+N LVK+KNPSLLLQLQR+
Sbjct: 22 NLDFATLDDLDPSLADGFYVYYEREVPFELRSSEGSDLPSEVGALEAIRVKVLLLGDQNNPEALKVELSSESNLFFHYIHQMSPASFKELQEGQKLMVDFAEYPAVLLRMLNHCIKEPHSYLAVFVMHRNGEARLDFIQNMEYKFVELLSCRFVASPDEVVRQHITYRYNAIKSRLALMQARLADVNALVKVKNPSLLLQLQRT 225
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A1Q9DXU8_SYMMI (SAS-6_N domain-containing protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DXU8_SYMMI) HSP 1 Score: 267 bits (683), Expect = 5.530e-85 Identity = 128/203 (63.05%), Postives = 165/203 (81.28%), Query Frame = 3
Query: 150 IDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
DFS ++E+DPS ++G + VYDREVPFELRVQ+ GPQ +GTLEAI+ K+L LG+ PQ R+EL+SE DLFFHF+H D+ +++ MQEQQKLM+DFPDY ++I++LN+CIKEPH+ LAV VM D ARLDFIQNMEYKFVEL+S F SPE+VV+ QIT+RYN++K RL+LM ARL D++ LVK+KNPSLLLQLQ++
Sbjct: 25 FDFSALEEMDPSLSEGHRVVYDREVPFELRVQDAESGPQEVGTLEAIRCKILALGEELSPQHCRIELTSENDLFFHFVHSVDEHSFREMQEQQKLMIDFPDYVAVVIKMLNNCIKEPHSFLAVFVMQRDGHARLDFIQNMEYKFVELLSCDFRASPEEVVRQQITFRYNSVKGRLSLMQARLSDMSALVKVKNPSLLLQLQKA 227
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A061RTL0_9CHLO (SAS-6_N domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RTL0_9CHLO) HSP 1 Score: 268 bits (684), Expect = 6.030e-85 Identity = 132/204 (64.71%), Postives = 165/204 (80.88%), Query Frame = 3
Query: 147 NIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
++DF+ +D+LDPS ADGF Y+REVPFELR E + P +G LEAI+VKVL LGD P A+RVELSSE++LFFH+ H +++ +QE QKLMVDF +YP +L+R+LNHCIKEPH++LAV VMH + ARLDFIQNMEYKFVEL+S +F SPE+VV+ QITYRYNA+KSRLALM ARL D+N LVK+KNPSLL+QLQR+
Sbjct: 24 HLDFATLDDLDPSLADGFYVHYEREVPFELRSSEGSDLPSEVGALEAIRVKVLLLGDQGNPSALRVELSSESNLFFHYTHQMSPASFRELQEGQKLMVDFAEYPAVLLRMLNHCIKEPHSYLAVFVMHRNGDARLDFIQNMEYKFVELLSCRFIASPEEVVRQQITYRYNAVKSRLALMQARLADVNALVKVKNPSLLMQLQRT 227 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig590.1.3 >prot_P-wetherbeei_contig590.1.3 ID=prot_P-wetherbeei_contig590.1.3|Name=mRNA_P-wetherbeei_contig590.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MASGGAAEGDVANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGback to top mRNA from alignment at P-wetherbeei_contig590:209..3172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig590.1.3 ID=mRNA_P-wetherbeei_contig590.1.3|Name=mRNA_P-wetherbeei_contig590.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2964bp|location=Sequence derived from alignment at P-wetherbeei_contig590:209..3172+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig590:209..3172+ >mRNA_P-wetherbeei_contig590.1.3 ID=mRNA_P-wetherbeei_contig590.1.3|Name=mRNA_P-wetherbeei_contig590.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig590:209..3172+ (Phaeothamnion wetherbeei SAG_119_79)back to top |