mRNA_P-wetherbeei_contig5899.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5899.1.1
Unique NamemRNA_P-wetherbeei_contig5899.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: A0A836CKW9_9STRA (Cleavage and polyadenylation specificity factor subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW9_9STRA)

HSP 1 Score: 439 bits (1128), Expect = 2.560e-146
Identity = 220/323 (68.11%), Postives = 264/323 (81.73%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDAFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVARRL--DTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVYDDV 963
            ERE RFTSTVA IVRRGGRCLIPVFALGRAQELLLILD+YWQ HP++QHIP+YYAS +ASKA+RVYQTY+NMMN  IRRQMDVSNPF F+HI NL+ ++ F+DLGPSVVMA+PGMLQ GVSR+LFDRWC+D++NGV++ GYSVE TLAKKIL+SPDEVTGMDGRIR LRC VEYVSFSAHVD+V+N++F++A APA++VLVHGE  EMMRL GEL R++   P  ERP+    +      + F RDK+A+AVG +   L    A++VGALLV KDF+ RLMAP D+ T++QL+VGGVR  L VPFYSS   L  +  EVYDDV
Sbjct:  206 EREERFTSTVAQIVRRGGRCLIPVFALGRAQELLLILDEYWQAHPDLQHIPIYYASRLASKAIRVYQTYINMMNAHIRRQMDVSNPFKFKHITNLKGIEHFQDLGPSVVMASPGMLQSGVSRQLFDRWCTDDKNGVLIPGYSVEGTLAKKILSSPDEVTGMDGRIRPLRCGVEYVSFSAHVDYVENKRFMDATAPANIVLVHGEANEMMRLRGELVRKYSRVPAAERPQVLAPRNCQEIRLEFHRDKMAKAVGRLTETLRRPDAAAVGALLVTKDFNNRLMAPEDLETYTQLKVGGVRQSLRVPFYSSFDALRLYFAEVYDDV 528          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: A0A6H5L755_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L755_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 7.960e-126
Identity = 201/355 (56.62%), Postives = 258/355 (72.68%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDAFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVAR--------------------RLDTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVYDDVELHLDENGGGSFGS 1005
            ERE+RF  TV+  V++GGRCLIPVFALGRAQELLLILD+YWQ+H E+ HIP+YYAS +ASKA+RVYQTY+NMMNE IR+QMDV+NPF F+HI NL+S+D F+D GPSVVMA+PGMLQ GVSR LFDRWC+D++N V++ GYSVE TLAKK+L+ PDEV GMDGR+R+ RC V+Y+SFSAHVDFVQN+ FI+ V PA+V+LVHGE   M+RL+ EL +QF   P DERP   + K      + F R+ VA+AVGS+AR                    R   A  V  LLV + F  RLM+  ++  ++ L+VGG+R RL VP++SS   L AF+ EV+ D  +  +E   G+FG+
Sbjct:  280 ERESRFVGTVSKAVKKGGRCLIPVFALGRAQELLLILDEYWQQHRELHHIPIYYASRLASKAIRVYQTYINMMNEHIRQQMDVANPFKFQHITNLKSIDQFDDSGPSVVMASPGMLQSGVSRMLFDRWCTDDKNSVLIPGYSVEGTLAKKLLSEPDEVQGMDGRVRQRRCEVKYISFSAHVDFVQNKGFIDGVQPANVILVHGEETGMLRLKTELEKQFAMVPQDERPLVFNPKNCAEVKIEFHRETVAKAVGSLARDLGGRGKGSKGVSRRAAAARRRGEAFDVQGLLVNERFTKRLMSADELDEYTLLKVGGIRQRLSVPYFSSAEALRAFVREVFADDSIKQEE---GTFGT 631          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: D8LKR5_ECTSI (Beta-Casp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR5_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.870e-122
Identity = 198/355 (55.77%), Postives = 252/355 (70.99%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDAFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVAR--------------------RLDTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVYDDVELHLDENGGGSFGS 1005
            ERE+RF  TV+  V++GGRCLIPVFALGRAQELLLILD+YWQ+H E+ HIP+YYAS +ASK      TY+NMMNE IR+QMDV+NPF F+HI NL+S+D F+D GPSVVMA+PGMLQ GVSR LFDRWC+D++N V++ GYSVE TLAKK+L+ PDEV GMDGR+R+ RC VEY+SFSAHVDFVQN+ FIE V PA+V+LVHGE   M+RL+ EL +QF   P DERP   + K      + F R+ VA+AVGS+AR                    R   A  V  LLV + F  RLM+  ++  ++ L+VGG+R RL VP++SS   L AF+ EV+ D  +  +E   G+FG+
Sbjct:  115 ERESRFVGTVSKAVKKGGRCLIPVFALGRAQELLLILDEYWQQHRELHHIPIYYASRLASK------TYINMMNEHIRQQMDVANPFKFQHITNLKSIDQFDDSGPSVVMASPGMLQSGVSRMLFDRWCTDDKNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRVRQRRCEVEYISFSAHVDFVQNKGFIEGVQPANVILVHGEETGMLRLKTELEKQFAMVPQDERPLVFNPKNCAEVKIEFHRETVAKAVGSLARDLGGRGKGSKGVSRRAAAARRRGEAFDVQGLLVNERFTKRLMSADELDEYTLLKVGGIRQRLSVPYFSSAEALRAFVREVFADDSIKQEE---GTFGT 460          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: A0A833SF12_PHYIN (Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SF12_PHYIN)

HSP 1 Score: 343 bits (881), Expect = 2.430e-111
Identity = 175/329 (53.19%), Postives = 235/329 (71.43%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDAFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVA-RRLDTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPF-YSSLGVLAAFIEEVYDDVELHLDE 981
            ERE RFT  V  +VRRGGRCLIPVFALGR QELLLILD++W+ HP++Q IP+Y+AS +A+KALRVYQTY+NMMN++IR+Q+ +SNPF F HI NL+S+D F+D GPSVVMA+PGMLQ GVSR+LF+RWCSD+RN  ++ GY VE TLAKKIL+ P E+  +DGRI  + CTVEY+SFSAH DFV    F+E + P ++VLVHGE+ EMMRL+  L ++F   P    P  S         + F  +K+A+A+G +A  +    + +  LLV  D  T LM   D+ T+++L  G +  +  VPF Y+S  VL  FI ++Y+DV +HL++
Sbjct:   29 EREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKFND-PKVYHPSISTPANMQEIVLEFKGEKIAKAIGGLASNQPKNGTIISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMYEDV-VHLEK 355          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: B8BY97_THAPS (Uncharacterized protein (Fragment) n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BY97_THAPS)

HSP 1 Score: 342 bits (876), Expect = 1.220e-110
Identity = 178/325 (54.77%), Postives = 230/325 (70.77%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDA--FEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVARRLDTASS-VGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVYDDVE 966
            EREARFT T+  IV  GGRCLIPVFALGRAQELLLILD+YWQEHP +Q IP+YYAS MAS+ALRVYQTY NMMN +IR QMD+ NPF F HIRNL+S+D   F+D GPSVV A+PGMLQ GVSR+LFDRW  D +NGV+LAGY+VE+TLAK+I++ P EV  ++GR + L C V+YVSFSAHVDFVQNR FI +V P +++LVHG + EM RL+G L   +   P ++RP  +         + F R + A+ +G +A         V  +LV +   ++++AP D+ T++ LRVG V  RL VPF   +  L  F+ E++  V+
Sbjct:  225 EREARFTGTIERIVTGGGRCLIPVFALGRAQELLLILDEYWQEHPHLQSIPIYYASKMASRALRVYQTYANMMNARIRAQMDLGNPFHFSHIRNLKSIDVNNFDDRGPSVVFASPGMLQSGVSRQLFDRWAGDPKNGVMLAGYAVEHTLAKEIMSQPKEVVTLEGRRQPLNCLVDYVSFSAHVDFVQNRDFITSVNPRNIILVHGAKEEMGRLKGALMLHYNKLPENKRPTIAMPPNEVDVKLIFTRRRSAKVMGKLAEAPPREGDPVRGILVTQQNSSKIVAPEDLSTYTPLRVGSVSSRLHVPFVGKIETLRLFLNEMFRGVD 549          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: A0A1Z5JMM1_FISSO (Cleavage and polyadenylation specificity factor subunit 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMM1_FISSO)

HSP 1 Score: 345 bits (886), Expect = 3.130e-110
Identity = 178/337 (52.82%), Postives = 239/337 (70.92%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDA--FEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVARRLDT---ASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVYDDVELHLDENGGGS 996
            EREARFT TV  +V RGGRCLIPVFALGRAQELLLILD+YWQ +P +Q IP+YYAS +AS+ALRVYQTY NMMN +IR QMD+SNPF FR I+NL+S+D   F+D GPSVV A+PGMLQ GVSR+LFDRW +D +NGV++AGY+VE+TLAK+I+A P EV  ++GR + L C V+YVSFSAHVDFVQNR FI  VAP  ++LVHG++ EM RL+  L   ++  P ++RP  +         + F R + A+ +G++A R D       V  ++V   F +++++P D+ T++ LR+G +  +L VPF  +   L  F+ E+Y  V+ +  E   GS
Sbjct:  213 EREARFTGTVERVVTRGGRCLIPVFALGRAQELLLILDEYWQANPHLQKIPIYYASKLASRALRVYQTYANMMNARIRAQMDISNPFSFRFIQNLKSIDVHNFDDSGPSVVFASPGMLQSGVSRQLFDRWAADPKNGVLIAGYAVEHTLAKEIMAQPKEVVSLEGRRQPLNCLVDYVSFSAHVDFVQNRSFITQVAPRHIILVHGQKDEMGRLKSALVHMYKQYPENKRPTITMPPNLQEVKLKFARRRSAKVMGTLANREDEPQEGEKVEGIMVTNSFSSKIVSPDDLATYTPLRLGSISSKLHVPFCGAATTLELFLNEMYHGVKKYETEGIEGS 549          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: A0A7S2Y2X5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y2X5_9STRA)

HSP 1 Score: 345 bits (884), Expect = 3.620e-109
Identity = 180/326 (55.21%), Postives = 239/326 (73.31%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLD--AFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVARRLDTASSVGA------LLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVY 954
            EREARFT TV  +V RGGRCLIPVFALGRAQELLLILD+YWQ HP +Q IP++YAS +AS+ALRVYQTY NMMN +IR QMDVSNPF F++I NL+S+D  +F+D GPSVV A+PGMLQ GVSR+LFDRW S+  NGV++AGY+VE+TLAK+I+A P EV  ++GR + L C V+YVSFSAHVDFVQNR FI+ VAP  +VLVHG++ EM RL+  L  Q++A P  +RP  +         + F R + A+ +G +A + + A+++ A      +LV   F ++++AP D+ T++ LRVG +  +L VPF  SL  L  F+ E++
Sbjct:  216 EREARFTGTVERVVTRGGRCLIPVFALGRAQELLLILDEYWQSHPHLQDIPIWYASKLASRALRVYQTYANMMNARIRAQMDVSNPFQFQYISNLKSIDVNSFDDSGPSVVFASPGMLQSGVSRQLFDRWASNPNNGVLIAGYAVEHTLAKEIMAQPKEVVTLEGRRQPLNCLVDYVSFSAHVDFVQNRSFIQKVAPKHIVLVHGQKDEMGRLKSALMLQYKAWPEAKRPTITMPPNLQEVKLRFARRRSAKVMGRLAEQQNEAATLTAGQGVQGILVTHQFHSKIVAPEDLATYTPLRVGTIASKLHVPFAGSLVTLQVFLTEMF 541          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: H3G835_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3G835_PHYRM)

HSP 1 Score: 341 bits (875), Expect = 4.140e-109
Identity = 174/329 (52.89%), Postives = 233/329 (70.82%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDAFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVAR-RLDTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPF-YSSLGVLAAFIEEVYDDVELHLDE 981
            ERE RFT  V  +VRRGGRCLIPVFALGR QELLLILD++W+ HP++Q IP+Y+AS +A+KALRVYQTY+NMMN++IR+Q+ +SNPF F HI NL+S+D F+D GPSVVMA+PGMLQ GVSR+LF+RWCSD+RN  ++ GY VE TLAKKIL+ P E+  +DGRI  + CTVEY+SFSAH DFV    F+E + P ++VLVHGE+ EMMRL+  L ++F   P    P            + F  +K+A+A+G +A  +      +  LLV  D  T LM   D+ T+++L  G +  +  VPF Y+S  VL  FI ++Y+DV +HL++
Sbjct:  204 EREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIVLVHGEKNEMMRLKSALNKKFND-PKVYHPSIFTPANMQEIVLEFKGEKIAKAIGGLASDQPKNGKVISGLLVEVDSQTHLMDKEDLSTYTKLISGSITQKQHVPFEYNSFDVLITFIRQMYEDV-VHLEK 530          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: K3X033_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X033_GLOUD)

HSP 1 Score: 343 bits (879), Expect = 7.780e-109
Identity = 175/330 (53.03%), Postives = 231/330 (70.00%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDAFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVA-RRLDTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPF-YSSLGVLAAFIEEVYDDVELHLDEN 984
            ERE RFT  V  +VRRGGRCLIPVFALGR QELLLILD++WQ HP++Q IP+Y+AS +A+KALRVYQTY+NMMN++IR+Q+ +SNPF F HI NL+S+D F+D GPSVVMA+PGMLQ GVSR+LF+RWCSD+RN  ++ GY VE TLAKKIL+ P E+  +DGR+  + CTVEY+SFSAH DFV    F+E + P ++VLVHGE+ EMMRL+  L ++F   P    P            + F  +K+A+A+G +A  +      +  LLV  D  T LM   D+ T+++L  G +  R  VPF Y S  VL  FI+++Y+DV+    EN
Sbjct:  222 EREGRFTGQVEAVVRRGGRCLIPVFALGRTQELLLILDEHWQAHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRKQIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIVALDGRVIPMNCTVEYISFSAHADFVGTSGFVEKLVPPNIVLVHGEKNEMMRLKSALNKKFND-PKIYHPNIFTPANMQEIVLEFKGEKIAKAIGGLASEQPQNGKVISGLLVEVDSHTHLMHKEDLSTYTKLISGTITQRQHVPFEYHSFDVLLTFIKQMYEDVQYLEKEN 550          
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Match: A0A7S3V3U7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V3U7_9STRA)

HSP 1 Score: 340 bits (873), Expect = 3.230e-108
Identity = 175/326 (53.68%), Postives = 235/326 (72.09%), Query Frame = 1
Query:    1 EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHIPVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLD--AFEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKKILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVLVHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVARAVGSVARRLDT---ASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLGVPFYSSLGVLAAFIEEVYDDV 963
            EREARFT TV  +V RGGRCLIPVFALGRAQELLLILD+YWQ +P +Q+IPVYYAS MAS+ALRVY+TY NMMN +IR QMDV NPF F+ I+NL+S+D  +F+D GPSVV A+PGMLQ GVSR+LFDRW +D +NG ++AGY+VENTLAK+I+ +P EV  ++GR + L C V+YVSFSAHVDF+QNR FI  V P  ++LVHG++ EM RL+  L  Q +  P  +RP  +         + F R + A+ +GS+A R         +  +LV ++F++++++P D+ T++ LR+G V  +L VPF   +  L  F+ E+Y DV
Sbjct:  217 EREARFTGTVERVVTRGGRCLIPVFALGRAQELLLILDEYWQANPHLQNIPVYYASKMASRALRVYRTYANMMNARIRAQMDVGNPFHFKFIQNLKSIDVNSFDDTGPSVVFASPGMLQSGVSRQLFDRWATDPKNGCLIAGYAVENTLAKEIMNAPREVVTLEGRRQPLNCLVDYVSFSAHVDFMQNRNFISRVDPRHIILVHGQKDEMGRLKSALMLQHKQLPESKRPTVTMPPNNIEVKLKFSRRRSAKVMGSLADRPSEPQEGEDISGILVTQNFNSKILSPEDLPTYTPLRLGSVSSKLHVPFAGQVPTLRLFLREMYGDV 542          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5899.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKW9_9STRA2.560e-14668.11Cleavage and polyadenylation specificity factor su... [more]
A0A6H5L755_9PHAE7.960e-12656.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKR5_ECTSI2.870e-12255.77Beta-Casp domain-containing protein n=1 Tax=Ectoca... [more]
A0A833SF12_PHYIN2.430e-11153.19Pre-mRNA 3'-end-processing endonuclease polyadenyl... [more]
B8BY97_THAPS1.220e-11054.77Uncharacterized protein (Fragment) n=2 Tax=Thalass... [more]
A0A1Z5JMM1_FISSO3.130e-11052.82Cleavage and polyadenylation specificity factor su... [more]
A0A7S2Y2X5_9STRA3.620e-10955.21Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
H3G835_PHYRM4.140e-10952.89Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
K3X033_GLOUD7.780e-10953.03Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S3V3U7_9STRA3.230e-10853.68Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5899contigP-wetherbeei_contig5899:1145..3656 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LKR5
PFAMsBeta-Casp,CPSF73-100_C,Lactamase_B,Lactamase_B_6,RMMBL
Model size1005
Max annot lvl2759|Eukaryota
KEGG koko:K14403
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006379,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0017091,GO:0031123,GO:0031124,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0035925,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0098787,GO:0098789,GO:1901360,GO:1901363
Exons5
Evalue4.71e-123
EggNOG OGsCOG1236@1|root,KOG1137@2759|Eukaryota
Ec32 ortholog descriptionBeta-lactamase-like
Ec32 orthologEc-07_004490.1
Descriptionnuclease activity
Cds size1005
COG categoryJ
BRITEko00000,ko00001,ko01000,ko03019,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186872.0881662-CDS-P-wetherbeei_contig5899:1144..14341683186872.0881662-CDS-P-wetherbeei_contig5899:1144..1434Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5899 1145..1434 -
1683186872.1104543-CDS-P-wetherbeei_contig5899:1765..20091683186872.1104543-CDS-P-wetherbeei_contig5899:1765..2009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5899 1766..2009 -
1683186872.1245098-CDS-P-wetherbeei_contig5899:2386..24741683186872.1245098-CDS-P-wetherbeei_contig5899:2386..2474Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5899 2387..2474 -
1683186872.1356263-CDS-P-wetherbeei_contig5899:2976..32321683186872.1356263-CDS-P-wetherbeei_contig5899:2976..3232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5899 2977..3232 -
1683186872.1452813-CDS-P-wetherbeei_contig5899:3529..36561683186872.1452813-CDS-P-wetherbeei_contig5899:3529..3656Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5899 3530..3656 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5899.1.1prot_P-wetherbeei_contig5899.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5899 1145..3656 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5899.1.1

>prot_P-wetherbeei_contig5899.1.1 ID=prot_P-wetherbeei_contig5899.1.1|Name=mRNA_P-wetherbeei_contig5899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=335bp
EREARFTSTVATIVRRGGRCLIPVFALGRAQELLLILDQYWQEHPEVQHI
PVYYASHMASKALRVYQTYVNMMNEQIRRQMDVSNPFVFRHIRNLRSLDA
FEDLGPSVVMAAPGMLQHGVSRELFDRWCSDERNGVVLAGYSVENTLAKK
ILASPDEVTGMDGRIRKLRCTVEYVSFSAHVDFVQNRQFIEAVAPADVVL
VHGERAEMMRLEGELRRQFEAKPLDERPKASDRKKGWLFAVTFPRDKVAR
AVGSVARRLDTASSVGALLVRKDFDTRLMAPGDVGTFSQLRVGGVRHRLG
VPFYSSLGVLAAFIEEVYDDVELHLDENGGGSFGS
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mRNA from alignment at P-wetherbeei_contig5899:1145..3656-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5899.1.1 ID=mRNA_P-wetherbeei_contig5899.1.1|Name=mRNA_P-wetherbeei_contig5899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2512bp|location=Sequence derived from alignment at P-wetherbeei_contig5899:1145..3656- (Phaeothamnion wetherbeei SAG_119_79)
GAGCGGGAGGCTCGGTTCACGAGTACGGTGGCGACGATCGTGCGACGCGG CGGGCGGTGCCTCATCCCCGTCTTCGCCCTCGGAAGGGCCCAGGAGCTGC TGCTCATCCTCGACCAGTACTGGCAAGGTGCGGCGAAGCGACGGAACGGC AATGCGATTTCGGAGGGAGAGAGGGATTGGGGTATTGGCCTCGCTCCGCA TTGCATTGCATCGTGGATTGGTCGCTTTCACGCTTTCGTTCTCCAAATCG TTTGTTCAGAGAAGGCGACCTCCACAAAGCGCGCAAAAGCGTCGCCGCCA TAAGTGTTCGCCGCCCATCCGCTGCTTTCTTCACTCCTTGCATCCGCTGT CAACCCATGAATGAGCGCGCAAACCCGCAAAGTAAACTCACCGACCGAAC GAAACCCACGAATCAACCAAGCAGAACACCCTGAGGTGCAGCACATCCCG GTGTACTACGCCTCCCACATGGCCTCTAAGGCGCTGCGCGTATATCAGAC GTACGTCAACATGATGAACGAGCAGATCCGCCGGCAGATGGACGTCTCCA ACCCTTTTGTGTTCCGCCACATCCGCAACCTGCGGAGCCTCGACGCGTTT GAGGACCTGGGGCCGTCCGTCGTCATGGCAGCGCCCGGCATGCTGCAACA CGGTGTCAGCCGCGAGCTCTTCGACCGCTGGTGGGTAGAGAATGAAGAAC AGAAGGGGAAAATCACAGTACAGAGAGCTTGAATTTGTTTGATGATGCTT GGATTTGTCAGGATCGCTTAAGCTGGTTTCGAACGGTTCTTTTTTATCTG TTTGATCAAATGTTGTGCCGTTGGAAATCGGTCAGCTCTCTGCAAGCAAG GCTAGTGAGAAGGAGATGCGGAAGAAAGGCACAAGTCTTTGGTTTACCCG CGATGTTTGGGCGGCGCGGTTTATGGTTGGTTATTGTGCAGATGGAACCG ATTCTTCCTCTGATTCGGCCCTGGTGCTGTGGTGGTGGTGGTGGTGGTGG GCCAGGAGCGGCGGGTTCGCGGTGAACCGGGTCAGGCCTTATTTACCTTT TATTTCTTATTGGGCTTGCCTTGTGATAGCAGCTGCGTTCTTGGATGCTG TCGATGCCACCGGCACACATGGAGCCAACGCTCTCCCTTCGTTGGGCCTG GCGATTGGCAATGGCCGTAATGTTCTCACCAGGTGTTCGGACGAGCGGAA CGGGGTGGTGCTGGCGGGGTACTCGGTAGAGAACACTCTGGCCAAAAAGA TCCTTGCCTCCCCCGACGAGGTGCGTCTTCTTTCCGTTTCTGCCCTTAAG TGCAAAATTGCCAGATTCACACCACACGGTTTCAATAGGTGAACGATTGG GAAGAAACGCGCGCTGTTACCTCGCAGAGCGTTTGGGATGATGGAAAGTT AGTAGCGCTGTGTTTGTGGTGTGCTGCGGATATCTTGTTCTTCACATGAC AGCAACCGTCGCGACGGGCGCCGCCACCGCCGTAGAGCGCTAGTATCTTC TCTTGTTTTCTCTGCTACTTCAACCGCCAATGTATTTCCCTGTTTAAAAG CCCCTGTGTCTCAAAAGAACGCTCTGCCATTCCCTGCCGTAACCGCCGCC TCGTCCTGTCCATCAACCAAAGCAAATTAAACCAATCCCAATTCCAGGTG ACGGGGATGGACGGGCGGATCCGCAAGCTGCGCTGCACCGTCGAATACGT GTCCTTCTCGGCGCACGTGGATTTTGTGCAGAACCGCCAGTTCATCGAAG CGGTGGCGCCAGCCGACGTTGTTTTGGTGCACGGGGAGCGCGCTGAGATG ATGCGGCTGGAAGGGGAGCTGCGGCGGCAGTTCGAGGCCAAGCCGCTGGA CGAGCGGCCTAAGGCAAGCGATCGAAAAAAGGGATGGCTCTGTAGTGGCA TCCTACGGATTGGGAGTAAGGGCGCCCTATTACTTAGGGCTGAGATTTAG GGGTAAGAGCTAGGGGCTGGAGTGAAGGTAAGGGCTTGGACCGAGCTCAA ACGAAAGGGAATGGGAGGGCGATGGTGGCGAAAACGTGTCTTCCAACTCT TCGGTGCTTGGCTTTTGTATTTCTGTAAGCTTTCGGCTTGCTCGCAAGGC GTTGTGAAACTACTATACTGGTCTCCGTGTTCGCTAGCCCCGCCACGCTT TTCTTTGCGGCTTTTCATTTTTCTTTCTCGTCTTCTCTCTGCAGCTGCAC ACGCCGAGCAACACGGAGGAAGTCGCCGTCACCTTCCCGCGAGACAAGGT CGCCCGCGCCGTCGGCTCCGTCGCCCGCCGCCTCGACACCGCCTCTTCCG TCGGCGCACTGCTCGTCCGCAAGGACTTTGACACGCGCCTGATGGCGCCC GGCGATGTTGGCACCTTCTCACAGCTGCGGGTTGGCGGCGTCCGCCACCG GCTGGGCGTGCCTTTCTACTCGTCGCTGGGCGTGCTGGCGGCCTTCATAG AGGAGGTCTACGACGATGTCGAGCTGCATCTGGATGAGAATGGCGGCGGC AGTTTCGGCTCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5899:1145..3656-

>mRNA_P-wetherbeei_contig5899.1.1 ID=mRNA_P-wetherbeei_contig5899.1.1|Name=mRNA_P-wetherbeei_contig5899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1005bp|location=Sequence derived from alignment at P-wetherbeei_contig5899:1145..3656- (Phaeothamnion wetherbeei SAG_119_79)
GAGCGGGAGGCTCGGTTCACGAGTACGGTGGCGACGATCGTGCGACGCGG
CGGGCGGTGCCTCATCCCCGTCTTCGCCCTCGGAAGGGCCCAGGAGCTGC
TGCTCATCCTCGACCAGTACTGGCAAGAACACCCTGAGGTGCAGCACATC
CCGGTGTACTACGCCTCCCACATGGCCTCTAAGGCGCTGCGCGTATATCA
GACGTACGTCAACATGATGAACGAGCAGATCCGCCGGCAGATGGACGTCT
CCAACCCTTTTGTGTTCCGCCACATCCGCAACCTGCGGAGCCTCGACGCG
TTTGAGGACCTGGGGCCGTCCGTCGTCATGGCAGCGCCCGGCATGCTGCA
ACACGGTGTCAGCCGCGAGCTCTTCGACCGCTGGTGTTCGGACGAGCGGA
ACGGGGTGGTGCTGGCGGGGTACTCGGTAGAGAACACTCTGGCCAAAAAG
ATCCTTGCCTCCCCCGACGAGGTGACGGGGATGGACGGGCGGATCCGCAA
GCTGCGCTGCACCGTCGAATACGTGTCCTTCTCGGCGCACGTGGATTTTG
TGCAGAACCGCCAGTTCATCGAAGCGGTGGCGCCAGCCGACGTTGTTTTG
GTGCACGGGGAGCGCGCTGAGATGATGCGGCTGGAAGGGGAGCTGCGGCG
GCAGTTCGAGGCCAAGCCGCTGGACGAGCGGCCTAAGGCAAGCGATCGAA
AAAAGGGATGGCTCTTCGCCGTCACCTTCCCGCGAGACAAGGTCGCCCGC
GCCGTCGGCTCCGTCGCCCGCCGCCTCGACACCGCCTCTTCCGTCGGCGC
ACTGCTCGTCCGCAAGGACTTTGACACGCGCCTGATGGCGCCCGGCGATG
TTGGCACCTTCTCACAGCTGCGGGTTGGCGGCGTCCGCCACCGGCTGGGC
GTGCCTTTCTACTCGTCGCTGGGCGTGCTGGCGGCCTTCATAGAGGAGGT
CTACGACGATGTCGAGCTGCATCTGGATGAGAATGGCGGCGGCAGTTTCG
GCTCC
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