prot_P-wetherbeei_contig5897.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig5897.1.1
Unique Name	prot_P-wetherbeei_contig5897.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	197

Homology

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A836CIZ7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ7_9STRA)

HSP 1 Score: 323 bits (829), Expect = 6.390e-111
Identity = 163/182 (89.56%), Postives = 173/182 (95.05%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASK 182
            MPKIG  RNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAAR+LLTLD KDPKRLFEGPALLRRM R+GLL E+ KELDFVLQLSTQKLLERRLQTKVF+QGLAKSIHHARVLI+QRHIRVGKQLV++PSF VR+DSEKHIDF+ TSP+G GRPGRVARKRAASK
Sbjct:    1 MPKIGMYRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARELLTLDAKDPKRLFEGPALLRRMARFGLLTEEEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIRQRHIRVGKQLVNIPSFTVRVDSEKHIDFALTSPFGQGRPGRVARKRAASK 182

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: D8LBC1_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LBC1_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 4.460e-109
Identity = 160/182 (87.91%), Postives = 171/182 (93.96%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASK 182
            MPK+G  RNYRKT+KTPRRP+EKERLD ELKLCGEYGLRCKREIWRVQ+ALAKIRKAARQLLTLD KDPKRLFEGPALLRRM R+GLL ED KELDFVLQL+T+K+LERRLQTKVF+QGLAKSIHHARVLIK RHIRVGKQLV+VP FMVR+DSEKHIDFS TSPYG GRPGRVARKRAASK
Sbjct:    1 MPKVGIHRNYRKTFKTPRRPYEKERLDSELKLCGEYGLRCKREIWRVQFALAKIRKAARQLLTLDTKDPKRLFEGPALLRRMSRFGLLGEDEKELDFVLQLTTEKMLERRLQTKVFKQGLAKSIHHARVLIKHRHIRVGKQLVNVPQFMVRMDSEKHIDFSITSPYGQGRPGRVARKRAASK 182

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A7S2V9P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9P4_9STRA)

HSP 1 Score: 318 bits (816), Expect = 6.330e-109
Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASK 182
            MPKI + RN+RKT KTPRRP+EKERLDQELKLCGEYGLRCKREIWRVQ ALAKIRKAAR+LLTL+PKDP+RLFEGPALLRRM RYGLL +D KELDFVLQLSTQKLLERRLQTKVF+QGLAKSIHHARVLIKQRHIRVGKQLV+VPSF+VR+DSEKHIDF+ TSPYGLGRPGRVARKRAA K
Sbjct:    1 MPKISARRNHRKTSKTPRRPYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARELLTLEPKDPRRLFEGPALLRRMSRYGLLMDDEKELDFVLQLSTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRMDSEKHIDFAITSPYGLGRPGRVARKRAAQK 182

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A3R6WW56_9STRA (Ribosomal_S4 domain-containing protein n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6WW56_9STRA)

HSP 1 Score: 312 bits (799), Expect = 2.640e-106
Identity = 166/196 (84.69%), Postives = 178/196 (90.82%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASKXXXXXXXXXXESDD 196
            MPKI   RNYRKTY+TP R FEKERLDQE+KL GEYGLRCKREIWRVQY LAK+RKAARQLLTLDPKDPKRLFEGPAL+RR+ RYGLL +D  ELDFVLQ++TQKLLERRLQTKVF+QGLAKSIHHAR LIKQRHIRVG+QLVDVPSFMVRLDSEKHIDFS TSPYG GRPGRVARKRAA + XXXXXXXX E D+
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQEMKLLGEYGLRCKREIWRVQYTLAKLRKAARQLLTLDPKDPKRLFEGPALMRRLKRYGLLADDENELDFVLQMNTQKLLERRLQTKVFKQGLAKSIHHARTLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAAQRAXXXXXXXXEEDDE 196

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A7S0TCI6_9STRA (Hypothetical protein n=2 Tax=Pelagophyceae TaxID=35675 RepID=A0A7S0TCI6_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.700e-102
Identity = 152/182 (83.52%), Postives = 168/182 (92.31%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASK 182
            MPK+   RNY KT KTPRRPFEKER+D ELKLCGEYGLRCKRE+WRVQ+ALAKIRKAAR+LLTLDPKDPKRLFEG ALLRRM RYGLL+E   +LD +LQ++TQKLLERRLQTKVF+QGLAKSIHHARVLIKQRHIRVGKQ+V+VPSFMVR+DSEKHIDF+ TSPYG GRPGRVARKRAA+K
Sbjct:    1 MPKVRFLRNYSKTSKTPRRPFEKERIDGELKLCGEYGLRCKRELWRVQFALAKIRKAARELLTLDPKDPKRLFEGAALLRRMARYGLLDETELDLDAILQMTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQVVNVPSFMVRVDSEKHIDFAITSPYGQGRPGRVARKRAAAK 182

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A3R7JV42_9STRA (Ribosomal_S4 domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JV42_9STRA)

HSP 1 Score: 302 bits (773), Expect = 4.190e-102
Identity = 151/182 (82.97%), Postives = 167/182 (91.76%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASK 182
            MPKI   RNYRKTY+TP R FEKERLDQELKL GEYGLRCKREIWRVQYAL+K+RKAAR+LLTLDPKDPKRLFEG ALLRR+ R+G+L+ED  ELDFVL+L+ QKLLERRLQTKVF+Q LAKSIHHARVLIKQRHIRVGKQLVDVPSF+VR+DSEKHIDF+ TSPYG GRPGRVAR+RAA +
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQYALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRFGVLSEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVARRRAAQR 182

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A833SYK2_PHYIN (S4 domain n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A833SYK2_PHYIN)

HSP 1 Score: 303 bits (775), Expect = 6.670e-102
Identity = 152/182 (83.52%), Postives = 166/182 (91.21%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAASK 182
            MPKI   RNYRKTY+TP R FEKERLDQELKL GEYGLRCKREIWRVQYAL+K+RKAAR+LLTLDPKDPKRLFEG ALLRR+ RYG+L ED  ELDFVL+L+ QKLLERRLQTKVF+Q LAKSIHHARVLIKQRHIRVGKQLVDVPSF+VR+DSEKHIDF+ TSPYG GRPGRVAR+RAA +
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQYALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRYGMLAEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVARRRAAQR 182

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: H3G8V6_PHYRM (Ribosomal_S4 domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V6_PHYRM)

HSP 1 Score: 298 bits (764), Expect = 4.930e-101
Identity = 150/180 (83.33%), Postives = 165/180 (91.67%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAA 180
            MPKI   RNYRKTY+TP R FEKERLDQELKL GEYGLRCKREIWRVQ+AL+K+RKAAR+LLTLDPKDPKRLFEG ALLRR+ R+G+L ED  ELDFVL+L+ QKLLERRLQTKVF+Q LAKSIHHARVLIKQRHIRVGKQLVDVPSF+VR+DSEKHIDF+ TSPYG GRPGRVAR+RAA
Sbjct:    1 MPKISRHRNYRKTYRTPSRAFEKERLDQELKLLGEYGLRCKREIWRVQFALSKLRKAARELLTLDPKDPKRLFEGSALLRRLKRFGVLAEDENELDFVLRLNVQKLLERRLQTKVFKQNLAKSIHHARVLIKQRHIRVGKQLVDVPSFLVRMDSEKHIDFAVTSPYGQGRPGRVARRRAA 180

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A1V9Y526_9STRA (40S ribosomal protein S9-1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y526_9STRA)

HSP 1 Score: 300 bits (769), Expect = 1.320e-100
Identity = 153/180 (85.00%), Postives = 163/180 (90.56%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYGLGRPGRVARKRAA 180
            MPKI   RNYRKTY+TP R F KERLDQELKL GEYGLRCKREIWRVQ+ LAK+RKAARQLLTLD KDPKRLFEGPAL+RR+ RYGLL +D  ELDFVL+L+ QKLLERRLQTKVF+QGLAKSIHHAR LIKQRHIRVG+QLVDVPSFMVRLDSEKHIDFS TSPYG GRPGRVARKRAA
Sbjct:    1 MPKISRHRNYRKTYRTPTRAFGKERLDQELKLVGEYGLRCKREIWRVQFTLAKLRKAARQLLTLDAKDPKRLFEGPALMRRLKRYGLLADDENELDFVLRLNIQKLLERRLQTKVFKQGLAKSIHHARCLIKQRHIRVGRQLVDVPSFMVRLDSEKHIDFSVTSPYGQGRPGRVARKRAA 180

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BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Match: A0A7S2BVT2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVT2_9STRA)

HSP 1 Score: 297 bits (760), Expect = 2.150e-100
Identity = 154/183 (84.15%), Postives = 166/183 (90.71%), Query Frame = 0

Query:    1 MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYALAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQLSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMVRLDSEKHIDFSQTSPYG-LGRPGRVARKRAASK 182
            MP I   RNY  T KTPRR +EKERLDQELKLCGEYGLRCKREIWRVQ ALAKIRKAAR LLTLD KDPKRLFEGPALLR+MVRYGLL+E+ KELDFVLQL+TQKLLERRLQTKVF+QGLAKSIHHARVLIKQRHIRVGKQLV+VPSF+VR+DSEKHI F+ TSPY  +GR GRVARKRAA+K
Sbjct:    1 MPSIAFKRNYSSTSKTPRRAYEKERLDQELKLCGEYGLRCKREIWRVQLALAKIRKAARDLLTLDVKDPKRLFEGPALLRKMVRYGLLSEEEKELDFVLQLTTQKLLERRLQTKVFKQGLAKSIHHARVLIKQRHIRVGKQLVNVPSFLVRVDSEKHIQFATTSPYSDVGRQGRVARKRAAAK 183

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5897.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CIZ7_9STRA	6.390e-111	89.56	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
D8LBC1_ECTSI	4.460e-109	87.91	Uncharacterized protein n=3 Tax=Eukaryota TaxID=27...	[more]
A0A7S2V9P4_9STRA	6.330e-109	88.46	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A3R6WW56_9STRA	2.640e-106	84.69	Ribosomal_S4 domain-containing protein n=6 Tax=Sap...	[more]
A0A7S0TCI6_9STRA	1.700e-102	83.52	Hypothetical protein n=2 Tax=Pelagophyceae TaxID=3...	[more]
A0A3R7JV42_9STRA	4.190e-102	82.97	Ribosomal_S4 domain-containing protein n=4 Tax=Per...	[more]
A0A833SYK2_PHYIN	6.670e-102	83.52	S4 domain n=2 Tax=Peronosporaceae TaxID=4777 RepID...	[more]
H3G8V6_PHYRM	4.930e-101	83.33	Ribosomal_S4 domain-containing protein n=22 Tax=Pe...	[more]
A0A1V9Y526_9STRA	1.320e-100	85.00	40S ribosomal protein S9-1 n=1 Tax=Achlya hypogyna...	[more]
A0A7S2BVT2_9STRA	2.150e-100	84.15	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 109..173 e-value: 2.4E-4 score: 30.4
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 109..152 e-value: 2.2E-10 score: 40.1
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 109..151 e-value: 6.44641E-7 score: 43.3922
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 8..108 e-value: 6.7E-21 score: 85.4
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 18..64 e-value: 1.1E-5 score: 26.2
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 108..168 e-value: 6.2E-13 score: 50.8
IPR005710	Ribosomal protein S4/S9, eukaryotic/archaeal	TIGRFAM	TIGR01018	TIGR01018	coord: 5..166 e-value: 2.7E-65 score: 217.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..196
None	No IPR available	PANTHER	PTHR11831:SF34	40S RIBOSOMAL PROTEIN S9-2-LIKE	coord: 5..195
None	No IPR available	PROSITE	PS50889	S4	coord: 109..183 score: 9.930788
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 12..166
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 5..195

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5897	contig	P-wetherbeei_contig5897:1146..3366 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5897.1.1	mRNA_P-wetherbeei_contig5897.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig5897 1146..3366 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig5897.1.1 ID=prot_P-wetherbeei_contig5897.1.1|Name=mRNA_P-wetherbeei_contig5897.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp
MPKIGSSRNYRKTYKTPRRPFEKERLDQELKLCGEYGLRCKREIWRVQYA
LAKIRKAARQLLTLDPKDPKRLFEGPALLRRMVRYGLLNEDNKELDFVLQ
LSTQKLLERRLQTKVFQQGLAKSIHHARVLIKQRHIRVGKQLVDVPSFMV
RLDSEKHIDFSQTSPYGLGRPGRVARKRAASKAAAGAGGGDEESDD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002942	S4_RNA-bd
IPR001912	Ribosomal_S4/S9_N
IPR036986	S4_RNA-bd_sf
IPR005710	Ribosomal_S4/S9_euk/arc
IPR022801	Ribosomal_S4/S9