prot_P-wetherbeei_contig58911.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58911.1.1
Unique Nameprot_P-wetherbeei_contig58911.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length106
Homology
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BLAST of mRNA_P-wetherbeei_contig58911.1.1 vs. uniprot
Match: A3WR59_9BRAD (DNA polymerase III gamma and tau subunits n=2 Tax=Nitrobacter sp. Nb-311A TaxID=314253 RepID=A3WR59_9BRAD)

HSP 1 Score: 56.6 bits (135), Expect = 4.430e-7
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:    1 LEPSDIREIVNRASFFVQQYGRLFNFSFQIYAHDGANEQRRFKAD-VHRFVEAIAKRCQRDIVGFFAIYTFELDENGVVCRLIGYAPVEIAPHIEHWWNAWRNDVND 106
            L  +D+REIVNRASFF+Q +GR+ N +F ++    A    R   + + +F E +   C        ++  +E D +GV  R++ + P  + P+       W N  N+
Sbjct:  280 LSRADVREIVNRASFFIQHHGRMMNAAFTVFPGWRAKSSERTAIEAIRQFREKLDCLCSDAGEPHASMTVYERDLDGVFGRIVAHVPQIVDPNFATVLADWCNGFNE 386
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58911.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A3WR59_9BRAD4.430e-729.91DNA polymerase III gamma and tau subunits n=2 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58911contigP-wetherbeei_contig58911:184..501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58911.1.1mRNA_P-wetherbeei_contig58911.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58911 184..501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58911.1.1 ID=prot_P-wetherbeei_contig58911.1.1|Name=mRNA_P-wetherbeei_contig58911.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
LEPSDIREIVNRASFFVQQYGRLFNFSFQIYAHDGANEQRRFKADVHRFV
EAIAKRCQRDIVGFFAIYTFELDENGVVCRLIGYAPVEIAPHIEHWWNAW
RNDVND
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