mRNA_P-wetherbeei_contig5891.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: A0A7S1GNB9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB9_CYCTE) HSP 1 Score: 230 bits (586), Expect = 2.050e-69 Identity = 123/239 (51.46%), Postives = 160/239 (66.95%), Query Frame = 1
Query: 40 AAMDDPLLGGA-GEWARFWSDRDLLAEIRKDVMRTLPESPLFQEERG--GAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLE 747
A DDPL A +W +F+ + LL EIRKDV+RT P+ F E G YAALERILFV+A+LN GVRYVQGMNE+ GT+Y V A D EWA AEAD++F F +MT++RD+FV +D SDTG+QGR+ ++ +L HDPE+ HL +D YA+RW TTLLSREF LPDT+RLWD++FA D ++CV+M++ R LL DF ++LLQ+YP T+V LLE
Sbjct: 159 AVHDDPLSTDADSKWFQFFENASLLDEIRKDVVRTHPDLYFFLEPENNLGQRRYAALERILFVWAKLNKGVRYVQGMNEIIGTLYFVLANDFNEEWACEAEADSYFLFNILMTEMRDVFVPDMDESDTGIQGRISNMASLLSLHDPEVRCHLVDIGIDASFYAIRWLTTLLSREFLLPDTIRLWDSMFASTHKDN--FLRYVCVTMVMLIRDDLLKGDFSTCLRLLQSYPSTNVDNLLE 395
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: F0YM84_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YM84_AURAN) HSP 1 Score: 223 bits (569), Expect = 1.730e-68 Identity = 111/224 (49.55%), Postives = 148/224 (66.07%), Query Frame = 1
Query: 79 WARFWSDRDLLAEIRKDVMRTLPESPLFQEERGGAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLER 750
W + D L EI KD+MRT P+ F+ GG ++ERILF+YA+LNPGVRYVQGMNEV GTI+ V A+D EW +AE DAFF FT +M ++RD+++ SLD SD GL G++ L +L +HDPEL HL +Q+DP Y+LRW TTLL+REF L DT+RLWD + ++ + R C++M+L QR LL DF + LLQNYP +D LL++
Sbjct: 102 WTQKQHDYVLRKEIHKDIMRTHPDHHFFE---GGTLRRQSMERILFIYAKLNPGVRYVQGMNEVLGTIFYVLASDSNEEWGANAEPDAFFCFTNIMAEMRDVYIHSLDNSDAGLSGKMSRLNALLQQHDPELWRHLDKNQLDPSYYSLRWITTLLAREFTLIDTIRLWDTILSE--ISRVDFLCHFCLTMILAQRETLLAGDFSFCLYLLQNYPASDPNVLLKQ 320
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: A0A7S1ZGV5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGV5_TRICV) HSP 1 Score: 220 bits (561), Expect = 2.010e-68 Identity = 116/224 (51.79%), Postives = 151/224 (67.41%), Query Frame = 1
Query: 49 DDPL-LGGAGEWARFWSDRDLLAEIRKDVMRTLPESPLFQEERG--GAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQ 711
DDPL L WA+F+ + LL EIRKDV+RT P+ F E R G YAA+ERILFV+A+LN GVRYVQGMNE+ GTIY V A D EWA AEAD +F F T+M ++RD+FV LD +DTG+QGR+ ++ +L HDPE+ HL +D Y++RW TTLLSREF L DT+RLWD++FA D ++CV+M++ R +LL SDF ++LLQ
Sbjct: 33 DDPLSLETDSRWAQFFENASLLDEIRKDVVRTHPDLHFFLEPRDNLGQRRYAAIERILFVWAKLNKGVRYVQGMNEIVGTIYFVLANDSNEEWACEAEADTYFLFNTLMVEMRDVFVPDLDDADTGIQGRISNMIALLSLHDPEVRCHLDDCGIDASFYSIRWLTTLLSREFRLADTIRLWDSMFASTHKDN--FLRYVCVTMVMVIRDQLLKSDFGSCLRLLQ 254
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: F1A0C5_DICPU (Rab-GAP TBC domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A0C5_DICPU) HSP 1 Score: 222 bits (566), Expect = 1.610e-66 Identity = 111/230 (48.26%), Postives = 154/230 (66.96%), Query Frame = 1
Query: 46 MDDPLLGGA-GEWARFWSDRDLLAEIRKDVMRTLPESPLF--QEERGGAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVT 726
+D PL +W +W D+++L +I KDV RT P F Q+E G + HY AL RILF+YA+LNPG++YVQGMNE+ G +Y +FATD EW +AEAD+F+ FT +M+++RD F ++LDRSD G+ ++ L +L K+D EL L +++P Y+ RW T LLS+EFELPD +RLWDALFAD DR L + C +ML+ R +L+ S F +KLLQ+YP T
Sbjct: 95 LDHPLSTQTDSKWNEYWKDQNILIDIEKDVRRTFPSMHFFNYQDEDGKSIHYEALRRILFIYAKLNPGIKYVQGMNEILGHVYYIFATDPNKEWQANAEADSFYCFTNLMSEIRDNFCKTLDRSDVGIISSIKKLNGILKKNDFELWNDLEEKKINPQFYSFRWITLLLSQEFELPDVLRLWDALFADQ--DRFDLLYYFCCAMLICVRDQLITSTFADSLKLLQSYPNT 322
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: A0A7S2U981_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U981_9STRA) HSP 1 Score: 219 bits (559), Expect = 3.620e-66 Identity = 113/225 (50.22%), Postives = 152/225 (67.56%), Query Frame = 1
Query: 79 WARFWSDRDLLAEIRKDVMRTLPESPLFQEERG--GAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLE 747
W++F+ + LL EIRKDVMRT P+ F EE G YAALERILF++A+LN GVRYVQGMNE+ GTIY V A D EWA AE D +F F ++M ++RD+FV LD +DTG+QGR+ ++ +L HDPE+ HL +D Y +RW TTLLSREF +PDT R+WD++FA D ++CV+M++ R +LL DF ++LLQ+YP TD+ LL+
Sbjct: 80 WSQFFENARLLDEIRKDVMRTHPDLSFFLEETRNLGQRRYAALERILFIWAKLNKGVRYVQGMNEIVGTIYFVLANDCNEEWACEAEVDTYFLFNSLMVEMRDVFVPDLDDADTGIQGRIANMMDLLALHDPEVKCHLDDCGIDATYYGIRWLTTLLSREFLVPDTTRIWDSMFASTHKDN--FLRYVCVTMVMVIREQLLKGDFSVCLRLLQSYPPTDMDRLLQ 302
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: A0A7S3V826_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V826_9STRA) HSP 1 Score: 228 bits (581), Expect = 7.280e-66 Identity = 113/226 (50.00%), Postives = 152/226 (67.26%), Query Frame = 1
Query: 76 EWARFWSDRDLLAEIRKDVMRTLPESPLFQEERG--GAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLE 747
+W F + LL EIRKDV+RTLP+ + + G YAA+ERILF++A+LN GVRYVQGMNE+ G +Y V A D AEWA AEAD +F F T+M ++RD+FV LD +DTG+QGR++++ +L HDP++ HL +DP Y++RW TTLLSREF LPDT+RLWD++FA D V +C+ M++ + L L DF ++LLQ YP TDV LLE
Sbjct: 513 KWKHFLENASLLDEIRKDVVRTLPDLQFYLDTNKHLGLRRYAAIERILFIWAKLNKGVRYVQGMNEIVGIMYFVLANDSNAEWASQAEADTYFLFNTLMVEMRDIFVPDLDEADTGIQGRMQNMLSLLSLHDPDVRCHLDDCGIDPGFYSIRWLTTLLSREFLLPDTIRLWDSMFASTHKDNFMRYVCVCMVMIIREDL--LRGDFGTCLRLLQAYPATDVEKLLE 736
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: A0A4D9CZ84_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ84_9STRA) HSP 1 Score: 223 bits (569), Expect = 3.310e-65 Identity = 108/223 (48.43%), Postives = 148/223 (66.37%), Query Frame = 1
Query: 85 RFWSDRDLLAEIRKDVMRTLPESPLFQEERGGAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNY-PVTDVAALLER 750
RF +DR L EIRKDV+RT P+ +Q++ G A Y AL RILF+YA+ N G RY+QGMNE+ GT++ V + D EWAEHAEAD F F +M+ +RD+F+E +D SDTG++ + L V+L++HDP LS H R ++ H Y+LRW TTL REF LPDT+ +WDALFAD D + ++ C+SML+ QR +L F ++ LQ Y P ++ LL R
Sbjct: 348 RFDADRSLFNEIRKDVVRTHPDQNFYQDQTFGTARYDALLRILFIYAKTNSGTRYIQGMNELAGTLFYVMSRDSDQEWAEHAEADTMFLFAQLMSQLRDVFIEKMDESDTGIESKFEQLEVLLERHDPTLSKHFRMIGLEAHFYSLRWITTLFCREFTLPDTIAVWDALFADK--DFSDFILYFCLSMLMEQRQEMLRCSFAKCLQSLQAYSPEAEMKRLLHR 568
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: K0SB70_THAOC (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SB70_THAOC) HSP 1 Score: 215 bits (547), Expect = 8.880e-65 Identity = 110/216 (50.93%), Postives = 145/216 (67.13%), Query Frame = 1
Query: 106 LLAEIRKDVMRTLPESPLFQE--ERGGAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLE 747
LL E+RKDV+RT P+ F E + G YAALERILFV+A+LN GVRYVQGMNE+ GT+Y V A D W+ HAEAD +F F +M ++RD+F+ LD +DTG+ GR+ ++ +L HDPE+ HL +DP Y++RW TTLLSREF LPDTVRLWD++FA D ++ V+M++ R RLL DF ++LLQ YP D+ LLE
Sbjct: 68 LLDEVRKDVIRTHPDLRFFLEPADNLGQKRYAALERILFVWAKLNKGVRYVQGMNEIVGTLYFVLAQDSDESWSRHAEADTYFLFNALMVEIRDVFMAELDEADTGIHGRISNMITLLSLHDPEVRCHLDEVGIDPSFYSVRWLTTLLSREFLLPDTVRLWDSMFASTHKDN--FLRYVSVTMVMVIRDRLLAGDFSACLRLLQAYPPPDLDMLLE 281
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: D7FV22_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV22_ECTSI) HSP 1 Score: 223 bits (567), Expect = 1.680e-63 Identity = 115/264 (43.56%), Postives = 160/264 (60.61%), Query Frame = 1
Query: 49 DDPLLG-GAGEWARFWSDRDLLAEIRKDVMRTLPESPLF-----------------------------QEERGGAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLER 750
DDPL EWA WSD++L+ I +DV+RT+P+ + + R G AL RILFV+A+LNP Y QGMNE+ T+Y V A+D+ EW H EAD FF FT +M+++RD+F+ S+D S++GL G++ + + L +HDPEL+ H+ +DP +ALRWFTTLLSREF+LPDT+RLWD+LFA DR+ VF+ V+++L QR LL DF ++LLQ YP TDV +L +
Sbjct: 618 DDPLSNKDTSEWAALWSDKELMQAIDQDVVRTMPDLAFYACRSIEDNDSDMVGSSASGEGGSGDSSEGERRRRGQERREALARILFVHAKLNPAESYTQGMNEIVATLYFVLASDENEEWNRHCEADTFFCFTNLMSEIRDVFLASMDESESGLHGKMEAFSRTLRQHDPELAEHMVSLALDPRYFALRWFTTLLSREFDLPDTIRLWDSLFAAQ--DRSTFLVFVFVTLMLAQRETLLAGDFASNLQLLQAYPPTDVPEILAQ 879
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Match: K0RVX0_THAOC (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RVX0_THAOC) HSP 1 Score: 215 bits (547), Expect = 1.750e-62 Identity = 110/216 (50.93%), Postives = 145/216 (67.13%), Query Frame = 1
Query: 106 LLAEIRKDVMRTLPESPLFQE--ERGGAAHYAALERILFVYARLNPGVRYVQGMNEVCGTIYVVFATDQAAEWAEHAEADAFFAFTTVMTDVRDLFVESLDRSDTGLQGRLRSLTVMLDKHDPELSAHLRYHQVDPHLYALRWFTTLLSREFELPDTVRLWDALFADHPVDRTALTVFLCVSMLLHQRLRLLHSDFPGIIKLLQNYPVTDVAALLE 747
LL E+RKDV+RT P+ F E + G YAALERILFV+A+LN GVRYVQGMNE+ GT+Y V A D W+ HAEAD +F F +M ++RD+F+ LD +DTG+ GR+ ++ +L HDPE+ HL +DP Y++RW TTLLSREF LPDTVRLWD++FA D ++ V+M++ R RLL DF ++LLQ YP D+ LLE
Sbjct: 297 LLDEVRKDVIRTHPDLRFFLEPADNLGQKRYAALERILFVWAKLNKGVRYVQGMNEIVGTLYFVLAQDSDESWSRHAEADTYFLFNALMVEIRDVFMAELDEADTGIHGRISNMITLLSLHDPEVRCHLDEVGIDPSFYSVRWLTTLLSREFLLPDTVRLWDSMFASTHKDN--FLRYVSVTMVMVIRDRLLAGDFSACLRLLQAYPPPDLDMLLE 510 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5891.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5891.1.2 >prot_P-wetherbeei_contig5891.1.2 ID=prot_P-wetherbeei_contig5891.1.2|Name=mRNA_P-wetherbeei_contig5891.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp ERGAPEAVPEVAAAAMDDPLLGGAGEWARFWSDRDLLAEIRKDVMRTLPEback to top mRNA from alignment at P-wetherbeei_contig5891:478..2663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5891.1.2 ID=mRNA_P-wetherbeei_contig5891.1.2|Name=mRNA_P-wetherbeei_contig5891.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2186bp|location=Sequence derived from alignment at P-wetherbeei_contig5891:478..2663- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5891:478..2663- >mRNA_P-wetherbeei_contig5891.1.2 ID=mRNA_P-wetherbeei_contig5891.1.2|Name=mRNA_P-wetherbeei_contig5891.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig5891:478..2663- (Phaeothamnion wetherbeei SAG_119_79)back to top |