prot_P-wetherbeei_contig5889.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5889.1.1
Unique Nameprot_P-wetherbeei_contig5889.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length722
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5889.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 245..493
e-value: 1.5E-22
score: 82.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 74..231
e-value: 6.7E-16
score: 60.5
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 256..394
e-value: 1.2E-6
score: 28.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..73
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 258..470
coord: 113..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5889contigP-wetherbeei_contig5889:1070..3235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5889.1.1mRNA_P-wetherbeei_contig5889.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5889 737..3368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5889.1.1 ID=prot_P-wetherbeei_contig5889.1.1|Name=mRNA_P-wetherbeei_contig5889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=722bp
MILLRGLHRRRSFPWVQDARREQPLLRPRHDREHSATADDKRDVFSQRVA
ERRQIGGRQEKRPAATQSAAPFKSNTALRKEIARHGEARAWMEILRCLDN
LCTDTAESEKHGVTFYNLGMHWLRKCGQGKLAVSMLATMRRRGYQPNAVS
YSIAAAACNDLANKGRGLALLEEMRADGVVPVAAVFDPLIRVCLKAGDTT
KAISLLQDACRRHGRREGGDSGGVGIGGKSGGDNGGDGGGAGSGRANETK
PDSTLPAVTFNACTYACAKRGDSRGALAVLAAMKRCGGGGAAALTPTAVI
YAGCIAACVNGRESGEVHERKGIARRLWGEMRAAGIRPNVYAYASYAAVH
ARSLDGAGAVALLREMEAAGMPANPVVFGSCVDAFLLGGDVDGALVLLRE
ATEKNRRPKRTASIGAGAGGGAGAEGGAGAGGGARAGAGAVPDARAYLRV
VVSCGAQGRWRDAVAVHEDAAAHVGLAVLGREGCGSVLQALRDGPTSASS
TAATGKTVAAGSGIGAAMDADRLLPQSCRSRAETDGAATADDADAAERLR
EADRIYSAYVDAGVLPCWGPAAAAAATAVAVAAAEAAAAPTARGVAGSAA
AAAAAAAEAAAVATAQPTELDLHGHTRPMARAALRRFLADATAWLATGPD
GGDGGSGGANDLIVVPGRGVNSLGGAGKQLVGEVRSFFGALEPPIAVAAV
PGNAGRLAVSRAGVEAWLAAQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long