mRNA_P-wetherbeei_contig5888.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5888.1.1
Unique NamemRNA_P-wetherbeei_contig5888.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: D8LS96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS96_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 3.230e-63
Identity = 102/166 (61.45%), Postives = 127/166 (76.51%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQ-PMTTPILVNDVTRNILSDRPRVTRFPIDWGA 495
            M++V+VTNVVV++NPT F  PL F +TF+    L+     DLEWK++YVGSAEDT+YDQVLEEV VGP+ +GVN+FVL AE+PDP  IP  DLVGVTV  IT  Y+ +EF+RVGYY+NNEH+DPAVN  I EG+ P    +    +TRNIL+D+PRVTRFPIDW A
Sbjct:    1 MSIVNVTNVVVLDNPTAFKNPLTFEVTFECLEALD----ADLEWKVIYVGSAEDTQYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAVNAEIQEGRIPPADTLDPAHITRNILADKPRVTRFPIDWNA 162
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: F0WG56_9STRA (Histone chaperone ASF1like protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WG56_9STRA)

HSP 1 Score: 189 bits (481), Expect = 3.380e-57
Identity = 94/166 (56.63%), Postives = 121/166 (72.89%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDWGAG 498
            MA V++TN+ V+ NPT F  P QF +TF+ A  LE+    DLEWK+ YVGSAED   DQVLEEV+VGPV VG N+FV  +E P+P  IP+CD +GVTVV +T SYR KEF+RVGYY+NN+++DP +     E  P T  + V+ + RNIL+D+PRVTRFPIDW +G
Sbjct:    1 MAFVTLTNITVLANPTAFTNPFQFEVTFECAHALED----DLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPNPDMIPDCDKIGVTVVLLTCSYRSKEFVRVGYYVNNDYADPLM----LENPPPT--VDVSKLQRNILADKPRVTRFPIDWSSG 156
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: A0A7S0FP47_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FP47_9STRA)

HSP 1 Score: 187 bits (476), Expect = 7.460e-57
Identity = 91/167 (54.49%), Postives = 125/167 (74.85%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDWGAGD 501
            MA+V+V N+VV++NPT F  P QF ITF+  ++LE+    DLEWK+VYVGSAED   DQ+L+E++VGPV VGVN+FVL A+APDP +IP  D++GVTVV +T SY+++EF+R+GYY+NNE++DP   E    G P  +P+ +  V R IL+D+PRVTRF I W   +
Sbjct:    1 MALVNVVNMVVLDNPTNFRNPFQFEITFECLQELED----DLEWKVVYVGSAEDMTADQILDEILVGPVPVGVNKFVLQADAPDPASIPNADILGVTVVLVTCSYKEREFIRIGYYVNNEYADPYDPEV---GPP--SPLDIKKVVRTILADKPRVTRFNIPWDGAE 158
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: A0A024TEU9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TEU9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.890e-57
Identity = 94/166 (56.63%), Postives = 119/166 (71.69%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDWGAG 498
            MA V++TN+ V++NPT F  P QF +TF+ A  LE+    DLEWK+ YVGSAED   DQVLEEV+VGPV VG N+FV  +E PDP NIPE D VGVTVV +T SY+ +EF+RVGYY+NN+++DP     + E  P    I  + + RNIL+D+PRVTRFPIDW  G
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLED----DLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDPNNIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPF----LLENPPAVVDI--HKLQRNILADKPRVTRFPIDWAPG 156
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: K0RRQ2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RRQ2_THAOC)

HSP 1 Score: 184 bits (468), Expect = 2.070e-56
Identity = 90/164 (54.88%), Postives = 125/164 (76.22%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDWG 492
            MA+V+V N+ V++NP  F+    F ITF+  + L +    DLEWK++YVGSAEDT +DQVL+E++VGP+ VG+N+FVL A+APD + IPE D++GVTVV +T SYR+KEF+RVGYY+NNE+++P   E   +G P+  P+ +N V R +LSD+PRVTRFPI WG
Sbjct:    1 MALVNVVNMAVLDNPAPFSATFSFEITFECLQPLSD----DLEWKVLYVGSAEDTSHDQVLDEILVGPIPVGINKFVLQADAPDRSQIPEADVLGVTVVLVTCSYRNKEFVRVGYYVNNEYAEPYDEE---KGPPL--PLDINKVRRVVLSDKPRVTRFPIKWG 155
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: A0A7S2LP02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LP02_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.480e-56
Identity = 95/169 (56.21%), Postives = 126/169 (74.56%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTT-PILVNDVTRNILSDRPRVTRFPIDW-GAGD 501
            MA+V+V N+VV++NPT F  P QF ITF+  ++L++    DLEWK+VYVGSAED+ +DQVLEEV+VGPV VGVN+FVL A+A DP  IP+ D++GVTVV +T SY+++EF R+GYY+NNE   P        G+P+   PI  + + R IL+D+PRVTRFPIDW GA D
Sbjct:    1 MALVNVVNMVVLDNPTHFRNPFQFEITFECLQELDD----DLEWKVVYVGSAEDSTHDQVLEEVLVGPVPVGVNKFVLQADAADPATIPKEDILGVTVVLVTCSYKNQEFARIGYYVNNEMELPPGTPVDESGKPIEDIPIDYSKLMRQILADKPRVTRFPIDWSGAND 165
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: A0A7S4WBT6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WBT6_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.770e-55
Identity = 92/163 (56.44%), Postives = 122/163 (74.85%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDW 489
            MA+V+V N++V++NPT F  P QF ITF+  ++LEE    DLEWK+VYVGSAE + +DQVL+E++VGPV VG+N+FVL AE PDP  IP  D++GVTVV +T +YR++EF+R+GYY+NNE+S     E    G P   PI +  VTR IL+D+PRVTRFPI W
Sbjct:    1 MALVNVVNMMVLDNPTAFLNPFQFEITFECLQELEE----DLEWKVVYVGSAESSEHDQVLDEILVGPVPVGINKFVLQAEPPDPRRIPPNDIIGVTVVLVTCAYREREFVRIGYYVNNEYSGEYDEET---GPPK--PIELGKVTRMILADKPRVTRFPIPW 154
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: A0A6G0WHB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHB9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.300e-55
Identity = 92/166 (55.42%), Postives = 118/166 (71.08%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDWGAG 498
            MA V++TN+ V++NPT F  P QF +TF+ A  LE+    DLEWK+ YVGSAED   DQVLEEV+VGPV VG N+FV  +E PDP  IPE D +GVTVV +T SY+ +EF+RVGYY+NN+++DP     + E  P    I  + + RNIL+D+PRVTRFPIDW  G
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLED----DLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDPAAIPEEDKIGVTVVLVTCSYKSREFVRVGYYVNNDYTDPF----LLENPPPVVDI--HKLQRNILADKPRVTRFPIDWAPG 156
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: W7TM89_9STRA (Histone chaperone n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM89_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.110e-55
Identity = 90/166 (54.22%), Postives = 124/166 (74.70%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNILSDRPRVTRFPIDWGAG 498
            MA+V++TN+VV++NPT F  P  F +TF+  ++LE+    DLEWK++YV SAE+   DQVLEEVMVGPV VGVN+FVL + APD + IPE D++GVTV+ IT +YR++EF+RVGYY+NNE+++P       +      P+ +  + RNIL+D+PRVTRFPIDWG G
Sbjct:    1 MALVNLTNIVVLDNPTSFTNPFTFEVTFECVQELED----DLEWKVLYVSSAENADQDQVLEEVMVGPVPVGVNKFVLQSAAPDVSQIPEEDIIGVTVILITCTYREQEFVRVGYYVNNEYAEPF------DPDHPPRPVDLLKLVRNILADKPRVTRFPIDWGMG 156
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BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Match: A0A448ZRT8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRT8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.310e-55
Identity = 87/174 (50.00%), Postives = 127/174 (72.99%), Query Frame = 1 
Query:    1 MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVGSAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVFITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQ----------PMTTPILVNDVTRNILSDRPRVTRFPIDWG 492
            MA+V+V N+VV++NPT F  P QF ITF+  ++L++    DLEWK++YVGSA+D   DQ+L+E++VGPV VGVN+FVL A+APDP+ + + DL+GVTVV +T SY+++EF+RVGYY+NNE+ DP    + A+            P+  P+ ++ + R IL+D+PRVT+FPI WG
Sbjct:    1 MALVNVVNMVVLDNPTCFTSPFQFEITFECLQELDD----DLEWKVLYVGSAQDAAKDQILDEILVGPVPVGVNKFVLQADAPDPSQLAQDDLLGVTVVLVTCSYKEREFVRVGYYVNNEYHDPNAAASSAQASENDGEQQLPPPIPNPVPLDRIQRQILADKPRVTKFPISWG 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5888.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS96_ECTSI3.230e-6361.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0WG56_9STRA3.380e-5756.63Histone chaperone ASF1like protein putative n=2 Ta... [more]
A0A7S0FP47_9STRA7.460e-5754.49Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A024TEU9_9STRA9.890e-5756.63Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
K0RRQ2_THAOC2.070e-5654.88Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2LP02_9STRA4.480e-5656.21Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4WBT6_9STRA1.770e-5556.44Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A6G0WHB9_9STRA2.300e-5555.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W7TM89_9STRA3.110e-5554.22Histone chaperone n=1 Tax=Nannochloropsis gaditana... [more]
A0A448ZRT8_9STRA3.310e-5550.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5888contigP-wetherbeei_contig5888:10..1280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LS96
Preferred nameASF1
PFAMsASF1_hist_chap
Model size609
Max annot lvl2759|Eukaryota
KEGG koko:K10753
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000785,GO:0000790,GO:0001932,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006336,GO:0006337,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007610,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016043,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016573,GO:0016574,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030466,GO:0031056,GO:0031058,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031497,GO:0031498,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032986,GO:0033043,GO:0033044,GO:0033523,GO:0033554,GO:0034243,GO:0034622,GO:0034641,GO:0034645,GO:0034723,GO:0034724,GO:0034728,GO:0035065,GO:0035066,GO:0036211,GO:0040029,GO:0042325,GO:0042393,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043618,GO:0043620,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044706,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048232,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0060378,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:1901360,GO:1901564,GO:1901576,GO:1901983,GO:1901985,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:2000112,GO:2000113,GO:2000756,GO:2000758,GO:2001141,GO:2001252
Exons4
Evalue5.29e-64
EggNOG OGsCOG5137@1|root,KOG3265@2759|Eukaryota
Ec32 ortholog descriptionHistone chaperone, ASF1-like
Ec32 orthologEc-12_004340.1
Descriptionchromatin assembly or disassembly
Cds size609
COG categoryBK
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186870.6461823-CDS-P-wetherbeei_contig5888:9..2771683186870.6461823-CDS-P-wetherbeei_contig5888:9..277Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5888 10..277 -
1683186870.6645272-CDS-P-wetherbeei_contig5888:593..7201683186870.6645272-CDS-P-wetherbeei_contig5888:593..720Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5888 594..720 -
1683186870.6733537-CDS-P-wetherbeei_contig5888:899..10001683186870.6733537-CDS-P-wetherbeei_contig5888:899..1000Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5888 900..1000 -
1683186870.6817443-CDS-P-wetherbeei_contig5888:1167..12801683186870.6817443-CDS-P-wetherbeei_contig5888:1167..1280Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5888 1168..1280 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5888.1.1prot_P-wetherbeei_contig5888.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5888 10..1280 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5888.1.1

>prot_P-wetherbeei_contig5888.1.1 ID=prot_P-wetherbeei_contig5888.1.1|Name=mRNA_P-wetherbeei_contig5888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=203bp
MAVVSVTNVVVMNNPTGFNQPLQFRITFQSARDLEEGNRTDLEWKLVYVG
SAEDTRYDQVLEEVMVGPVHVGVNEFVLHAEAPDPTNIPECDLVGVTVVF
ITSSYRDKEFLRVGYYINNEHSDPAVNEAIAEGQPMTTPILVNDVTRNIL
SDRPRVTRFPIDWGAGDPTVPPPTGGGGGGDAAVGGSAGDADDDALLLED
GDD
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mRNA from alignment at P-wetherbeei_contig5888:10..1280-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5888.1.1 ID=mRNA_P-wetherbeei_contig5888.1.1|Name=mRNA_P-wetherbeei_contig5888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1271bp|location=Sequence derived from alignment at P-wetherbeei_contig5888:10..1280- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGTCGTAAGCGTAACTAACGTCGTCGTGATGAACAATCCGACTGG
ATTCAACCAGCCGCTTCAGTTCAGGATTACATTCCAATCCGCGCGGGACC
TGGAGGAAGGCAAGTCGAGAGCTCACGTTTTGGCGCCAAAAGGACGTTCG
TCCAGAGCGAGAGCTCTAGACCATTCAAACATAGTTCCTTGCGGCGTTCC
ATCGGATACATTGCTGCAAGGCGGCTGCAAAAGTCTTGGTAACCTGATCG
CGTCCCGTACACGCCCCACCCCACCACGAGTCGCACAGATCTTGAGTGGA
AGCTCGTCTACGTAGGGAGCGCGGAGGATACGAGATACGACCAAGTACTT
GAGGAGGTCATGGTGGGGCCGGTCCACGTCGGTGAGTTTCATACGGTATG
CCGCTTAAGTTTAGGAAGGTCCCTTGCAGTGCCACTGTCCAACTTCAAAA
CCTGCACGGATGGAGAAAGCAATTGTCCGTCAACCAGACGCAACCGAAAG
ACATTCGCGTCATTGACGTCACATGGCCGGCTCACAACGCACCTCTCAAA
ACGATCCCAGGAGTGAATGAATTTGTGCTGCACGCCGAGGCGCCCGACCC
AACAAACATCCCGGAGTGCGACCTCGTGGGCGTGACGGTGGTGTTCATCA
CTTCAAGCTACCGGGACAAGGAGTTCTTGCGCGTCGGGTGAGCCACAGCT
GGCTGGGCGCCGGTACCGCCGTCGCCTTGCTCCGTTACTTGCACCCTCGC
ATGTCGGCTTTTACTCTCGGCAAAGGCCGGCCGGGCTTGGCTCTCCATTG
TACCGTGGAGGTTGAAGAAATGATCTAATACTTTGTCTGAACCGCCAGGG
TGTCTTTCGTCGTGGAAAAAACTTTTTCTCTTGCCATCTCTACTGCGCTG
CTTCGTTTCTCGCAGTTTCTCACCTTCTCTCTTCCCTCCACCGCTTCTTC
CACCGCTGTCGCACCGCGCGTGGCACCGGCGGCCACGCCACGGTGCGGCG
CAGGTACTATATCAACAACGAGCACAGCGACCCGGCGGTGAACGAGGCGA
TTGCGGAGGGGCAGCCGATGACAACCCCCATCCTCGTCAATGACGTCACC
CGCAACATCCTCTCCGACCGCCCGCGCGTCACGCGCTTCCCCATCGACTG
GGGCGCCGGCGATCCGACGGTGCCGCCCCCGACGGGCGGCGGCGGCGGCG
GGGACGCGGCGGTGGGCGGGTCGGCTGGTGATGCAGACGACGATGCGCTG
CTGCTGGAGGACGGTGACGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5888:10..1280-

>mRNA_P-wetherbeei_contig5888.1.1 ID=mRNA_P-wetherbeei_contig5888.1.1|Name=mRNA_P-wetherbeei_contig5888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=609bp|location=Sequence derived from alignment at P-wetherbeei_contig5888:10..1280- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGTCGTAAGCGTAACTAACGTCGTCGTGATGAACAATCCGACTGG
ATTCAACCAGCCGCTTCAGTTCAGGATTACATTCCAATCCGCGCGGGACC
TGGAGGAAGGCAATCGCACAGATCTTGAGTGGAAGCTCGTCTACGTAGGG
AGCGCGGAGGATACGAGATACGACCAAGTACTTGAGGAGGTCATGGTGGG
GCCGGTCCACGTCGGAGTGAATGAATTTGTGCTGCACGCCGAGGCGCCCG
ACCCAACAAACATCCCGGAGTGCGACCTCGTGGGCGTGACGGTGGTGTTC
ATCACTTCAAGCTACCGGGACAAGGAGTTCTTGCGCGTCGGGTACTATAT
CAACAACGAGCACAGCGACCCGGCGGTGAACGAGGCGATTGCGGAGGGGC
AGCCGATGACAACCCCCATCCTCGTCAATGACGTCACCCGCAACATCCTC
TCCGACCGCCCGCGCGTCACGCGCTTCCCCATCGACTGGGGCGCCGGCGA
TCCGACGGTGCCGCCCCCGACGGGCGGCGGCGGCGGCGGGGACGCGGCGG
TGGGCGGGTCGGCTGGTGATGCAGACGACGATGCGCTGCTGCTGGAGGAC
GGTGACGAC
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