prot_P-wetherbeei_contig5887.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5887.2.1
Unique Nameprot_P-wetherbeei_contig5887.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length406
Homology
BLAST of mRNA_P-wetherbeei_contig5887.2.1 vs. uniprot
Match: A0A835ZB74_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB74_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.660e-31
Identity = 106/314 (33.76%), Postives = 142/314 (45.22%), Query Frame = 0
Query:   42 SLWSTACLTHVACEALRLEAKHLI-----LRIRPAPSQDIVEVFGNQAVSLAVSLYVSTCLLFGGSYAFSQAATPASVVATXXXXXXXXXXXXXXXXXXXXNVKSAAAVSAALMPPPLFLTPAAAAATNVPLFQHLGALLLAYILLDTAHLVRAWRLAPNAPMLLHHALFGAVLAIGVALEQRPEQFRMHAVLFGAELSTPLLNLRWILTKGLGYRPRALLATLSLGFAAIFFATRIVGYGLLLLEM---HADPRSDVHLWR----------------------LAMPPPVAASFATLLWVAFALNVYWAWLIV 325
            SLW TA  T+ ACEALR+ A  L+      R   AP + I E FG QA+SLAVS Y    L     YA  +                                             P   T  AA A  + L  H+  +L  Y++ DT+HL+R W L+ N  MLLHHA+F  VL +G A  Q P  +R+H VLF AELSTPLLNLRWIL     Y+ R L+A LS+ FA +F  +R+  YG L+ ++       + DV L R                      L+ P      F   ++ ++ LN+YW  +I+
Sbjct:   38 SLWHTAWSTYAACEALRMVAVWLLPLWWRRRRGGAPERAIRESFGTQAMSLAVSTYTVAHLAQLRLYASWEL--------------------------------------------PFLHT--AADADCIALIHHMTVVLGTYVICDTSHLIRTWHLSSNPAMLLHHAIFSVVLGLGAANPQLPPHYRIHVVLFSAELSTPLLNLRWILRWVAHYKGR-LVAPLSMAFALLFLFSRVGLYGALIADLVKKQPHRQLDVRLLRAACCLHTSFCGSSAWPVKTRRKLSFPRAQQDIFCAAVFCSYLLNLYWLIIII 304          
BLAST of mRNA_P-wetherbeei_contig5887.2.1 vs. uniprot
Match: A0A6H5K373_9PHAE (TLC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K373_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.580e-25
Identity = 63/165 (38.18%), Postives = 101/165 (61.21%), Query Frame = 0
Query:  172 LGALLLAYILLDTAHLVRAWRLAPNAPMLLHHALFGAVLAIGVALEQRPEQFRMHAVLFGAELSTPLLNLRWILTK-GLGYRPRALLATLSLGFAAIFFATRIVGYGLLLLEMHADPRSDVHLW-RLAMPPPVAASFATLLWVAFALNVYWAWLIVAAFFKPRGR 334
            L A++L+YI+ DT HLVR+WR+  N  ML+HH +F  +  +G+   Q P   R+H ++F AE+STPLLN RW++   GL ++   ++   S  F A+F  TRI+ Y  ++L++       + L+  L MP P+ + F   + V++ +N+YWAWLI+ A F   G+
Sbjct:  273 LMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLALFLVTRILMYLFMILDI-------IQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEGK 430          
BLAST of mRNA_P-wetherbeei_contig5887.2.1 vs. uniprot
Match: D7FKT8_ECTSI (TLC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT8_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 6.040e-25
Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 0
Query:  172 LGALLLAYILLDTAHLVRAWRLAPNAPMLLHHALFGAVLAIGVALEQRPEQFRMHAVLFGAELSTPLLNLRWILTK-GLGYRPRALLATLSLGFAAIFFATRIVGYGLLLLEMHADPRSDVHLW-RLAMPPPVAASFATLLWVAFALNVYWAWLIVAAFFKPRGR 334
            L A++L+YI+ DT HLVR+WR+  N  ML+HH +F  +  +G+   Q P   R+H ++F AE+STPLLN RW++   GL ++   ++   S  F  +F  TRI+ Y  ++L++       + L+  L MP P+ + F   + V++ +N+YWAWLI+ A F   G+
Sbjct:  253 LMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDI-------IQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEGK 410          
BLAST of mRNA_P-wetherbeei_contig5887.2.1 vs. uniprot
Match: A0A7S4MJU3_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MJU3_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 6.750e-5
Identity = 54/167 (32.34%), Postives = 73/167 (43.71%), Query Frame = 0
Query:  173 GALLLAYILLDTAHLVRAWRLAPNAPMLLHHALFGAVLAIGVALEQRPEQFRMHAVLFG------------AELSTPLLNLRWILTKGLGYRPRALLATLSLGFAAIFFATRIVGYGLLLLEMHADPRSDVHLWRLAMPPPVAASFATL-LWVAFALNVYWAWLIVA 326
             AL + Y+  D    V+ + +  +   LLHH+LF A+                H VL+G             ELSTP LN+RW+L        RA  +  S GFA  F ATR VGYGL L ++ A+    V LW   +P      F    + V F LN+ W   + A
Sbjct:   98 AALFVGYLQWDLFWCVKNYHVNGDWGALLHHSLFIAIT---------------HYVLWGWYFKKPFAWLSLTELSTPFLNIRWMLAVRELKATRAY-SVASFGFALTFLATRAVGYGLGLADLWAN----VALW---LPAKRGLYFVIAGVHVGFGLNLMWGVTVAA 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5887.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZB74_9STRA3.660e-3133.76TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5K373_9PHAE1.580e-2538.18TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FKT8_ECTSI6.040e-2537.58TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S4MJU3_9EUKA6.750e-532.34Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 113..333
e-value: 3.2E-4
score: 30.0
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 172..325
e-value: 2.5E-14
score: 53.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..405
NoneNo IPR availablePANTHERPTHR13439:SF55TRAM/LAG1/CLN8 HOMOLOGY DOMAINcoord: 171..332
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 171..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5887contigP-wetherbeei_contig5887:1286..3154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5887.2.1mRNA_P-wetherbeei_contig5887.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5887 936..3313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5887.2.1 ID=prot_P-wetherbeei_contig5887.2.1|Name=mRNA_P-wetherbeei_contig5887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=406bp
MCQSREMRKTRGASVTSVGYVSLSFVFFYALAFYLQLPPATSLWSTACLT
HVACEALRLEAKHLILRIRPAPSQDIVEVFGNQAVSLAVSLYVSTCLLFG
GSYAFSQAATPASVVATTAVAAAAGTAGTASAAGGAGNVKSAAAVSAALM
PPPLFLTPAAAAATNVPLFQHLGALLLAYILLDTAHLVRAWRLAPNAPML
LHHALFGAVLAIGVALEQRPEQFRMHAVLFGAELSTPLLNLRWILTKGLG
YRPRALLATLSLGFAAIFFATRIVGYGLLLLEMHADPRSDVHLWRLAMPP
PVAASFATLLWVAFALNVYWAWLIVAAFFKPRGRPPPRPAPTRDDSEPAT
ATTEPLGKQEPGAWNGSGSSGGGHGGEGVRGMPTENEESAELVVDGGGGD
CCERS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom