mRNA_P-wetherbeei_contig58861.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A6J4S8D9_9ACTN (Uncharacterized protein n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4S8D9_9ACTN) HSP 1 Score: 119 bits (298), Expect = 9.900e-29 Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 13 FAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITIN-DLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
FA+ +R++ S P STLLHG VHGVP+GG + D RP A + +G H DDV A++A++G GITDP +RR ER++ F+GQ L+ L T +G+VD+EE EH A F SGG +DR
Sbjct: 334 FADVAKRVVASEPLFPRSTLLHGCVHGVPVGGEVDPGLDRRPAADALAVVLGHHDDDVVASVAADGFGITDPEQRRAAERLVGGFSGQSLDRLATPDGLVDIEEQEHGAAFTGLSGGTSGSDR 456
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A7X7PJW8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7X7PJW8_9BACT) HSP 1 Score: 104 bits (260), Expect = 1.310e-23 Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 4 RSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
RS F + ++ ++P+ TLLHGVVHGVP+ + + D RP+P+ A+G H D+ + LA+ G+G TD RR ER+L AFTGQ L LG+ +G VD++E+EH+ FE GG DR
Sbjct: 327 RSVFVDQVSSVVAAKPKWPRMTLLHGVVHGVPVRESVKV-DQRPDPRQVDGALGRHLQDLVSTLAAPGLGATDADARRALERMLVAFTGQLLPNLGSDDGAVDIDEHEHATAFEGLPGGKAGVDR 450
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A257CIB3_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium PBB6 TaxID=2015568 RepID=A0A257CIB3_9BURK) HSP 1 Score: 104 bits (259), Expect = 1.800e-23 Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 55 HLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
HL S+LLHGVV GVP+GG++ DLRP ++ +A+G H DDV AALA+ G P ++R TER+L AFT QR+N+LG+A+G+V++EE EH+A F S+ G DR
Sbjct: 385 HLRSSLLHGVVVGVPVGGKLW-GDLRPAAESLSVAMGQHDDDVLAALAARG---ATPNQQRATERLLAAFTSQRVNQLGSADGLVNLEEGEHAAAFFSQPSGSAGNDR 488
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: UPI001D2E93F7 (hypothetical protein n=1 Tax=Arthrobacter sp. Bi26 TaxID=2822350 RepID=UPI001D2E93F7) HSP 1 Score: 99.0 bits (245), Expect = 1.380e-21 Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 7 SAFAEGG-RRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
SAFA R + P L S+LLHG V GVP+ G + + D RP+ A +A+G H DDV AA A+ G ++RRDTER+L AFT Q++ L +G+V++EE+EH+AGF + GG TDR
Sbjct: 344 SAFASAAVGRFHPAIPWGLRSSLLHGSVFGVPVSGPVLV-DHRPDSTALAVALGEHDDDVVAAFAAAGK---PESQRRDTERLLAAFTAQKVGRLAAPDGIVEIEEHEHAAGFSALPGGISGTDR 464
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: UPI001AE05D30 (hypothetical protein n=1 Tax=Rhizobacter sp. AJA081-3 TaxID=2753607 RepID=UPI001AE05D30) HSP 1 Score: 97.8 bits (242), Expect = 3.510e-21 Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 7 SAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
SAFA + P L S+LLHG ++GVP+ G T+ D RP+ +A+GLH DD+ AA A+ P +RR TER+L AFT Q++N LG A+G V++EE+EH+ F S G TDR
Sbjct: 353 SAFASEAIERYVAPPWQLRSSLLHGAIYGVPVSGSPTL-DRRPDAGGVSVALGLHDDDLLAAFAAAQ---ATPDQRRATERLLAAFTAQKVNRLGAADGAVELEEHEHAVAFASLPAGIAGTDR 472
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: T1X915_VARPD (Uncharacterized protein n=3 Tax=Variovorax TaxID=34072 RepID=T1X915_VARPD) HSP 1 Score: 97.8 bits (242), Expect = 3.510e-21 Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 16 AEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
A+ GRR + + P HL S+LLHG ++GVP+ G + D RP+ +AIG H D++ AAL++ P +RR +ER+L AFT Q++N LG+ +G+V++EE+EH+A F S GG DR
Sbjct: 354 ADAGRRFV-APPWHLRSSLLHGAIYGVPVAGTAPV-DRRPSAGTLRVAIGQHEDEMLAALSAAPQ--ATPEQRRASERLLTAFTAQKINRLGSPDGLVELEEHEHAAAFTSVPGGIDGDDR 470
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A7V9IHG1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IHG1_9ACTN) HSP 1 Score: 95.9 bits (237), Expect = 1.660e-20 Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 1 ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
A SAFA + P HL S LLHG V+GVP+ + D RP A +A+G H DV AALA+ + T +RRDTER+L AF Q++N LG+ +G V++EE EHS F S G TDR
Sbjct: 337 ASSAFAADAITHFVTTPWHLRSCLLHGAVYGVPVQTAPAV-DRRPATDAVRVALGEHDGDVLAALAT--VADTPEERRRDTERLLEAFAAQKINRLGSPDGTVEIEELEHSRAFASLPAGSAGTDR 459
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A4Q5WL13_9BURK (Uncharacterized protein (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5WL13_9BURK) HSP 1 Score: 92.8 bits (229), Expect = 1.900e-19 Identity = 51/126 (40.48%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 1 ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
A S FA R + P L S+LLHG ++GVP+ G + D RP+ +A G H D++ AAL++ P +RR +ER+L AFT Q+++ LG+ +G+V++EE+EH+AGF S G DR
Sbjct: 360 AASTFAADAARRFVAPPWQLRSSLLHGAIYGVPVAGE-PLQDRRPDAGGLAVAFGQHEDEMLAALSAAPQ--ATPEQRRASERLLTAFTAQKIDRLGSPDGLVELEEHEHAAGFSSVPAGIDGDDR 482
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A1I0PD53_9RHOB (Uncharacterized protein n=3 Tax=Aliiroseovarius TaxID=1658781 RepID=A0A1I0PD53_9RHOB) HSP 1 Score: 92.0 bits (227), Expect = 3.690e-19 Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 13 FAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSG 357
F G R + P+H++STLL+G+VHGVP+ G + D RP+P+ A+G +D AAL + M D R +TER++ A T ++ +LG NG V++EE EH+A FE+ G
Sbjct: 316 FLPEGGRFVAVEPKHIYSTLLNGIVHGVPVTGPVPA-DQRPDPRRVRAALGPQVEDSIAALTAAAMEGDDLDARAETERLIAALTNDQVAKLGERNGAVEIEEREHAARFEAERG 429
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: UPI0013920DFA (hypothetical protein n=1 Tax=Pseudoxanthomonas kaohsiungensis TaxID=283923 RepID=UPI0013920DFA) HSP 1 Score: 90.9 bits (224), Expect = 9.380e-19 Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 1 ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
A S FA + L S+LLHGV+HGVP+ G + D RP+ ++ +++GL DD+ AALA P +RR +R+L AFT Q+++ LG A+G V++EE+EH A F S G DR
Sbjct: 356 AASIFANDAVERFVAPAWQLRSSLLHGVIHGVPVRGAAAL-DRRPDSRSLEVSLGLQEDDLLAALAVPAS--ASPEERRSADRLLTAFTAQKVDRLGAADGAVELEEHEHGAAFASLPAGSAGNDR 478 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58861.1.1 >prot_P-wetherbeei_contig58861.1.1 ID=prot_P-wetherbeei_contig58861.1.1|Name=mRNA_P-wetherbeei_contig58861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATback to top mRNA from alignment at P-wetherbeei_contig58861:107..484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58861.1.1 ID=mRNA_P-wetherbeei_contig58861.1.1|Name=mRNA_P-wetherbeei_contig58861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig58861:107..484+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58861:107..484+ >mRNA_P-wetherbeei_contig58861.1.1 ID=mRNA_P-wetherbeei_contig58861.1.1|Name=mRNA_P-wetherbeei_contig58861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig58861:107..484+ (Phaeothamnion wetherbeei SAG_119_79)back to top |