prot_P-wetherbeei_contig58858.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58858.1.1
Unique Nameprot_P-wetherbeei_contig58858.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length47
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig58858.1.1 vs. uniprot
Match: UPI001BA621E8 (hypothetical protein n=1 Tax=Bradyrhizobium sp. JYMT SZCCT0428 TaxID=2807673 RepID=UPI001BA621E8)

HSP 1 Score: 76.3 bits (186), Expect = 6.630e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:    1 MHKDQNQIVETAVEARGGLLGRPVLLVLVVSCVLAIAALIVTYSG 45
            MHKD  QIVETAVEARGGLLGRPVLLVL+VSC+LA+AAL+VTYSG
Sbjct:   57 MHKDGKQIVETAVEARGGLLGRPVLLVLIVSCILAVAALVVTYSG 101
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58858.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001BA621E86.630e-1786.67hypothetical protein n=1 Tax=Bradyrhizobium sp. JY... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58858contigP-wetherbeei_contig58858:88..228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58858.1.1mRNA_P-wetherbeei_contig58858.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58858 88..228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58858.1.1 ID=prot_P-wetherbeei_contig58858.1.1|Name=mRNA_P-wetherbeei_contig58858.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
MHKDQNQIVETAVEARGGLLGRPVLLVLVVSCVLAIAALIVTYSGT*
back to top