mRNA_P-wetherbeei_contig588.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A6U0WI81_9STRA (Transmembrane protein 231 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WI81_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.830e-54 Identity = 100/234 (42.74%), Postives = 147/234 (62.82%), Query Frame = 1
Query: 1 FQAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAG--QAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
F ++S V SL R L+QSR D N DGL + + LN+Q+P+A E++ + + FFQ+ L RA++ + A+ EA+ G+P + +DGDF LRQT+PL V GG++ PY D+PLL S+EQA S+++++YAARN+TM +T Y+LW + P G A G IFN T+T+RI + V YTP +SEVL GWIQYL++ VVV F+L++ ++Y+NQ
Sbjct: 92 FSLAYSSSNAVASLLPDQARAGLLQSRERDDNRDGLSEAIELNLQLPLAREEELRWVQMVAFFQSTLSTRARVIFEAAAFVEASGGVPGAGLTVDGDFRLRQTYPLNVRGGFERPYEDEPLLDAPGITSAEQASVSRIMEAYAARNLTMVYTPTYLLWHPTLREQPVNGG---ALGDGARIFNVTITVRIPTERVSYTPQISEVLFDGWIQYLSILVVVAFILEKLLSFIYYNQ 322
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S3JT02_9STRA (Transmembrane protein 231 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT02_9STRA) HSP 1 Score: 183 bits (464), Expect = 4.420e-53 Identity = 93/237 (39.24%), Postives = 151/237 (63.71%), Query Frame = 1
Query: 1 FQAFFTSMAQVNSLY----QAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVA-AAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
F+ ++SM+ ++S++ Q +LRVP+++S +D N DG+ D+ +L +P+ EK++S + FF +L+ +A+L M+T+AYA A + +P RA DGDFLL Q WPL V GGYQ PY + PL+ P++ V ++ LF ++L +Y ARN +M + Y +W P G R A+ S FN T+ +R+ +LYTPP +EV + W++YL++F+V+ F+LDR +V++NQ
Sbjct: 81 FEILYSSMSSISSIFARETQNSLRVPVLRSLELDKNRDGITDQFSLEALIPLQQGEKIHSTSVMAFFNVRLKRKARLEMETLAYAHADSAMPGRAAYFDGDFLLLQKWPLRVKGGYQLPYENTPLI-PTSNVDAQSILFPRLLAAYRARNNSMHYNQMYTVWS----PRAGKRDDYASSSLPDSFNFTLNMRVPIAQILYTPPATEVFKDAWLKYLSLFIVIAFLLDRLCSFVFYNQ 312
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S3MEB7_9STRA (Transmembrane protein 231 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEB7_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.540e-52 Identity = 98/226 (43.36%), Postives = 136/226 (60.18%), Query Frame = 1
Query: 10 FFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVY 687
F+++ AQ+N LY +LR+PL QS +D N DG DR+ ++MP+A E ++ F ALV+ TQL +A+ D V+YA + ++LDGD + RQTWPL V GG++ PY DDPL A +S+E S V+ Y ARN TM + ++Y E Q+ V + SA FNA+M IRI Q + YTPPVS VL+ WIQY+A F VV F+L R +V+
Sbjct: 90 FYSTSAQINELYSESLRIPLFQSAELDDNRDGRTDRLEFGIRMPLAPTETIHGFTALVYVNTQLDSKARYVFDGVSYATFESASAINQLSLDGDLMFRQTWPLTVKGGFRVPYQDDPLFDLKAGISAEDVSISSVMRRYNARNFTMRYVSQYAQVERRQSV-----VPSDHSAPNYFNASMVIRIPAQPIRYTPPVSTVLKHAWIQYIAFFAVVSFLLFRLNSFVF 310
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: F0Y486_AURAN (Transmembrane protein 231 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y486_AURAN) HSP 1 Score: 159 bits (401), Expect = 6.130e-44 Identity = 90/237 (37.97%), Postives = 134/237 (56.54%), Query Frame = 1
Query: 1 FQAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTG-LPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSA-TVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGI---FNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
FQ F+SMA V +LY LRVP ++S +D+N DG+ D+ L +P+ E+V + F+ +L+ RA++ MD +AY+ G + +A+ +DGD LRQ WP GGY PY PLL P+ ++ E+ L + Y RN TMD+ Y +W P G G+ FN TM +RI + +LYTP SEVL+ WI+YLA+FVVV ++L++ +V++NQ
Sbjct: 78 FQIVFSSMADVENLYSGELRVPTLRSIELDLNRDGMADQFHLTALIPLRKGERVLHADLVTFYDVKLRRRARVHMDALAYSSGGGGGMAGKALYVDGDVGLRQRWPFRAKGGYYLPYTKYPLLDPTDHELTLEETLMPNIFYGYRNRNNTMDYHELYKVWSPAPPPIDGP--------FGVREEFNFTMVMRIPEMEILYTPTASEVLKDAWIKYLALFVVVKYLLEKLCAFVFYNQ 306
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S4ECR2_9STRA (Transmembrane protein 231 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECR2_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.840e-43 Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 1
Query: 4 QAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSA-TVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
Q F+SM V +LY LRV +Q+ +D N DG+ D P+A E + FF+T+L RA++ D++A AE G+ ++ +DGD++L+Q WP GGY PY PLL PS + ++ L ++ Y RN T+D+ +Y +W P+ G V A FN TM +R+ QQ+VLYTP SEVL+ W++YLA+FVVV ++L+ FA +V +NQ
Sbjct: 85 QIVFSSMTDVENLYGPELRVCNLQNIELDFNRDGVTDEFHFTALCPLAKGETILGASVATFFRTKLSSRARVDFDSLAIAEHRDGMGGGSLFVDGDYILKQKWPFRAKGGYYLPYKRFPLLDPSDHKIKLQETLLPNIIFGYRNRNNTLDYVQQYKVWT----PSPG--VPDNHGAYANFNLTMVLRVPQQDVLYTPTASEVLKDAWLKYLAIFVVVKYLLEFFASFVAYNQ 310
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S2GB28_9STRA (Transmembrane protein 231 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GB28_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.690e-38 Identity = 87/241 (36.10%), Postives = 136/241 (56.43%), Query Frame = 1
Query: 4 QAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATV----SSEQAL----FSKVLDSYAARNVTMDFTNRYVLWEAGQAPTG-GARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQV 699
Q F+SM VN+L+ LR P++++ D N DG+PD++ LN+ MP+ + E + S K L+F+ L+ A+L MD ++Y + L A+ +DGD +Q L V GY++PY DPLL PS+ + S+ Q ++ Y R+ TM+ +R+ +W Q PT G + FN T IR QN++Y+P VSEVL WI+YLA+ VVV +++D + YV+ +Q+
Sbjct: 50 QISFSSMNSVNTLFGDTLRAPVLRTSESDDNGDGIPDKLKLNMVMPIYSGEVINSVKLLLFYDVTLRRHARLKMDAMSYLSHESPLSGGALFVDGDLEWKQRSALPVSSGYRQPYVTDPLLDPSSVLPWKKSNGQGASLIDLPSLITRYRDRDFTMELNSRHAIW---QQPTAVDYSEENNGMTSRSFNLTAVIRYPLQNIMYSPEVSEVLFDAWIRYLAVLVVVMYLVDLCSAYVFHHQI 287
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A2R5GGF9_9STRA (Transmembrane protein 231 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGF9_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.920e-26 Identity = 76/229 (33.19%), Postives = 115/229 (50.22%), Query Frame = 1
Query: 13 FTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQV 699
+ S V +Y+ LR PLI++ D N DGL DR TL V MP+ A EKV +A+ F L A+L MD + Y + ++ LP R + ++G+ L Q PL+V P A++ S ++ SYA RN TM N Y +WE + + S G F +T+ + + YTP ++EVL+ WIQYLA+F + + ++ +V+ NQV
Sbjct: 84 WASNEDVRDVYEPYLRAPLIRAWPEDDNLDGLADRWTLAVHMPLDADEKVMHVQAVAAFDYSLLGSAELDMDGLVYVDYSSPLPGRGLQVEGEARLHQRAPLSVRRANANPMLRFNAGRGLASMRSSSV--GAMMASYAKRNFTMVLANEYKVWEVSRGAD------SFQSTAGGFALNLTVHVPVDELTYTPDLAEVLKFAWIQYLALFALFFALIYAIRQFVFSNQV 304
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A482SW93_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SW93_9ARCH) HSP 1 Score: 100 bits (250), Expect = 1.060e-22 Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 13 FTSMAQVNSLYQAAL---RVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARN 438
+++ A +N+ Y A RVP ++S +D N DG DR+ ++V +P+ A E + F A V+ +L +RAK+ D V + P + +++DGD +LRQTWPL V GGY+ Y +D L +T ++ V+ Y ARN
Sbjct: 4 YSTNAYINAAYSNAYTQTRVPTLRSAEMDDNRDGKTDRLEVSVLLPITADESISGFTAAVYLDVKLNERAKVLFDGVGFVHYEGSTPLQKLSVDGDMMLRQTWPLKVYGGYRRLYENDALYDVDSTTPAQDVFIQSVMQKYNARN 148
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A5B8MYQ8_9CHLO (Transmembrane protein 231 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYQ8_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 2.710e-20 Identity = 69/230 (30.00%), Postives = 111/230 (48.26%), Query Frame = 1
Query: 10 FFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLT--PSATVSSEQAL-FSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRI-DQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVY 687
F++++ +N ++ + D N DG D + ++M KV K L F+ +L++R + M ++AY E G+P +A+ DG LRQ PL G +E Y D L+ P + + L + +L+ Y RN T F Y W+AG A GG F + +R+ Q ++YTP E+L+ GWIQ+LA FVV +++L + YV+
Sbjct: 80 FWSTLPNLNRAFETRFVSTDLSVTQEDFNFDGKADAI--RIKMVSNVGAKVQGVKVLAQFEYKLRERVHMNMKSLAYVEHGAGMPGKALFADGSLALRQQDPLPDGSTRRE-YLSDLLVDGEPDGVLQASSKLRVNAMLEEYFFRNETTVFDTNYESWQAGDAAHGG------------FETNILLRVPSSQALVYTPSTIEILKFGWIQFLASFVVFFWLLSYWEWYVF 294
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A250X5A8_9CHLO (Transmembrane protein 231 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X5A8_9CHLO) HSP 1 Score: 90.5 bits (223), Expect = 6.960e-18 Identity = 64/225 (28.44%), Postives = 105/225 (46.67%), Query Frame = 1
Query: 31 VNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPL---AVGGGYQEPYADD-PLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRID-QQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYF 690
+N+ + +Q+ D N DG PD +N + ++ VY K L+ FQ + ++ M ++AY A+TG P + +DGD L Q P+ + G Y P + P T + + Q LF ++ Y RN T ++N Y +W+AG T F M +RI Q + Y P E+L+ WIQ+LA F+V+W++ +++F
Sbjct: 86 INAQFSEEFIPASVQTSVEDTNYDGKPD--VINFVARVQSSTPVYGVKVLLQFQYGFFNLVRVQMYSLAYFSASTGTPGGVLYVDGDLNLVQRSPINDMSYNGVYNYPILNSQPPNTLQSVQAPSQLLFEDIIADYKTRNYTTTYSNVYPVWKAGSGNT--------------FELKMVVRIPPNQMIWYRPQTIEMLKNAWIQFLATFIVLWWLYSYVEQFIFF 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig588.2.1 >prot_P-wetherbeei_contig588.2.1 ID=prot_P-wetherbeei_contig588.2.1|Name=mRNA_P-wetherbeei_contig588.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp MAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFback to top mRNA from alignment at P-wetherbeei_contig588:3541..5169+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig588.2.1 ID=mRNA_P-wetherbeei_contig588.2.1|Name=mRNA_P-wetherbeei_contig588.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1629bp|location=Sequence derived from alignment at P-wetherbeei_contig588:3541..5169+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig588:3541..5169+ >mRNA_P-wetherbeei_contig588.2.1 ID=mRNA_P-wetherbeei_contig588.2.1|Name=mRNA_P-wetherbeei_contig588.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig588:3541..5169+ (Phaeothamnion wetherbeei SAG_119_79)back to top |