mRNA_P-wetherbeei_contig58765.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58765.1.1
Unique NamemRNA_P-wetherbeei_contig58765.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: A0A521LID0_9HYPH (DUF2817 domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LID0_9HYPH)

HSP 1 Score: 266 bits (679), Expect = 4.060e-86
Identity = 131/167 (78.44%), Postives = 144/167 (86.23%), Query Frame = 1
Query:    1 PLKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            PLK  EGEEIGTDTALLG +DA  LFIVSSGTHGPEGF+GSACQLALL D L +RAT   I++LL+HAVNP+GFSHL RTNEDNIDLNRNF+DF+ PYP NPVYEEIH+LLVP+AWPPS A E +LAAAM RLA QR+PGVSSGQA HPDGLFY GT PAWSNRT R
Sbjct:   44 PLKGAEGEEIGTDTALLGRADADRLFIVSSGTHGPEGFSGSACQLALLGDELAKRATDRGIALLLVHAVNPFGFSHLKRTNEDNIDLNRNFNDFAAPYPDNPVYEEIHELLVPKAWPPSHANETQLAAAMARLAGQRNPGVSSGQARHPDGLFYCGTAPAWSNRTIR 210          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: A0A521QN34_9HYPH (DUF2817 domain-containing protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QN34_9HYPH)

HSP 1 Score: 260 bits (665), Expect = 3.820e-84
Identity = 128/167 (76.65%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    1 PLKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            PLK  EGEEIGTDTALLG++DA  LFIVSSGTHGPEGF+GSACQL+LLND L  RA    I++LLIHAVNP+GFSHL RTNEDNIDLNRNF+DFS PYP NPVYEEIHDLLVP AWPPS+  E +L A M RLA QR PG+SSGQA HPDGLFY+GT PAWSN T R
Sbjct:   34 PLKGAEGEEIGTDTALLGAADADKLFIVSSGTHGPEGFSGSACQLSLLNDELAHRANDRGIALLLIHAVNPFGFSHLKRTNEDNIDLNRNFNDFSAPYPDNPVYEEIHDLLVPAAWPPSSENENQLTATMARLADQRAPGISSGQARHPDGLFYSGTAPAWSNHTIR 200          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: UPI001E5337E6 (M14 family metallopeptidase n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E5337E6)

HSP 1 Score: 259 bits (663), Expect = 7.670e-84
Identity = 129/167 (77.25%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    1 PLKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            PL    GEEIGTDTALLG +DA  LFIVSSGTHGPEGF+GSACQLALLND L +RA    I++LLIHAVNP+GFSHL RTNEDNIDLNRNF+DF+ PYP NPVYE+IHDLLVP AWPPSA  EE+L AAM RLA QR+PGVSSGQ  HPDGLFY GT PAWSNRT R
Sbjct:   34 PLTGAAGEEIGTDTALLGPADAGKLFIVSSGTHGPEGFSGSACQLALLNDELARRAADRGIALLLIHAVNPFGFSHLKRTNEDNIDLNRNFNDFATPYPDNPVYEQIHDLLVPAAWPPSADNEERLNAAMARLAGQRNPGVSSGQDKHPDGLFYCGTAPAWSNRTIR 200          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: A0A259MRZ4_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MRZ4_9PROT)

HSP 1 Score: 256 bits (655), Expect = 1.280e-82
Identity = 127/166 (76.51%), Postives = 138/166 (83.13%), Query Frame = 1
Query:    4 LKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            LK   GEEI TDT LLG +DA  LFIVSSGTHGPEGFAGSACQ+ALLND L +RA+  RI++LLIHAVNPYGFSHL RTNEDNIDLNRNF DFS+PYP NPVYE+IHDLLVP  WPP A  E++L AAM RLA QRDPGVSSGQA H DGLFY+GT PAWSN T R
Sbjct:   35 LKGAAGEEIATDTTLLGPADANKLFIVSSGTHGPEGFAGSACQVALLNDELAKRASDRRIALLLIHAVNPYGFSHLKRTNEDNIDLNRNFGDFSQPYPDNPVYEQIHDLLVPATWPPVADNEQRLTAAMARLAGQRDPGVSSGQAKHADGLFYSGTDPAWSNGTIR 200          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: UPI001FAC039D (M14 family metallopeptidase n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FAC039D)

HSP 1 Score: 185 bits (470), Expect = 1.200e-54
Identity = 100/164 (60.98%), Postives = 118/164 (71.95%), Query Frame = 1
Query:   19 GEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALL-NDPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIR--LAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            GE + TD ALLG S A  L IVSSGTHGPEGF GS CQ+ALL +D LL R T   +S+LLIHAVNPYGFSHL RTNEDNIDLNRNF  F  P PAN  Y ++   ++P AWPP+A +E+ +AA + R  + A RD  VSSGQ + PDG+FY G  P+WSNRT R
Sbjct:   45 GETLTTDIALLGPSQAEKLLIVSSGTHGPEGFCGSGCQVALLQDDELLGRLTKAGVSLLLIHAVNPYGFSHLRRTNEDNIDLNRNFMRFDAPLPANAAYADVEPFVLPPAWPPAAESEQAMAAYVARHGMDALRDA-VSSGQYTVPDGIFYGGRTPSWSNRTIR 207          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: UPI0019BD0A6E (DUF2817 domain-containing protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019BD0A6E)

HSP 1 Score: 180 bits (456), Expect = 1.350e-52
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 1
Query:    7 KATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDP-LLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQR-DPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            K  +GEE+  D AL G++DA  L IV+SGTHG EGF GS CQ ALL+D  L +R    RI+VLL+HA+NP+GF+ L R NEDNIDLNRNF DFSRP  AN  YEE+H+LL+P  WPP+ A    L     R+  +     VSSGQAS P+GLFY+G   +WSNRT R
Sbjct:   39 KGAQGEELAMDAALAGAADAQALLIVTSGTHGVEGFCGSGCQRALLDDDDLFRRINAARIAVLLVHAINPHGFARLRRANEDNIDLNRNFLDFSRPPAANAAYEELHELLLPAQWPPAEANLAALGVIRARVGERAFQAAVSSGQASRPNGLFYSGVAASWSNRTLR 205          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: UPI00037D4A5D (M14 family metallopeptidase n=1 Tax=Thiomonas sp. FB-6 TaxID=1158291 RepID=UPI00037D4A5D)

HSP 1 Score: 179 bits (453), Expect = 4.190e-52
Identity = 93/169 (55.03%), Postives = 116/169 (68.64%), Query Frame = 1
Query:    4 LKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDP-LLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIR--LAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            L+   GEE+  DTA++G   +  + +VSSGTHGPEGFAGSA QLALL D  LL+RA    +++LL+H VNPYGFSHL RTNEDN+DLNRN  DFSRP P+NPVY E+  LL+P  WPP  A  + L   +    + A R   V++GQ   PDG+FY GT P WSNR+ R
Sbjct:   42 LRGARGEELAIDTAVIGGRGSRKVLVVSSGTHGPEGFAGSAAQLALLEDTELLERAQRAEVALLLVHGVNPYGFSHLQRTNEDNVDLNRNHIDFSRPLPSNPVYAELEPLLIPAQWPPGPAERQALQQWIESHGMPAYRKA-VTAGQYGSPDGVFYGGTGPTWSNRSLR 209          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: A0A853G8V6_9BURK (DUF2817 domain-containing protein n=1 Tax=Parapusillimonas granuli TaxID=380911 RepID=A0A853G8V6_9BURK)

HSP 1 Score: 177 bits (449), Expect = 1.400e-51
Identity = 92/164 (56.10%), Postives = 110/164 (67.07%), Query Frame = 1
Query:   16 EGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLNDP-LLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQRD-PGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            +GE++  DTA  G  +AP L ++SS  HG EG+ GS CQ+ALL D  LL RA    + VLL+HAVN YG+S   RTNEDNIDLNRNF DFS+P P NP Y  +H LLVP+AWPPSA  E  + A + R   Q    G+  GQ SHPDGLFY G  P+WSNRT R
Sbjct:   40 QGEDLAMDTAYFGDPEAPALLVLSSAMHGEEGYCGSGCQVALLEDEALLARARAGGVGVLLVHAVNAYGYSWGHRTNEDNIDLNRNFGDFSKPLPDNPHYRTLHPLLVPDAWPPSAPNEAAIQAFIEREGRQAYLEGMMKGQHSHPDGLFYGGAAPSWSNRTLR 203          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: A0A536ULW0_9PROT (DUF2817 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ULW0_9PROT)

HSP 1 Score: 174 bits (442), Expect = 1.800e-50
Identity = 90/168 (53.57%), Postives = 112/168 (66.67%), Query Frame = 1
Query:    4 LKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLN-DPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLA-AQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            L   EGE++  D ALLG  DA  L +++SGTHG EGF GS CQ ALL  DP L+    + I+VL++HA+NPYGFSHL R NEDNIDLNRNF DF +P P N  Y EIH LL+P  WPP+  +E +L A + +   A     VS GQ +  DG+FY G++P WSNRT R
Sbjct:   37 LHGVEGEDLSIDLALLGKPDAASLLLLTSGTHGVEGFCGSGCQTALLREDPFLRAIGHSDIAVLMLHALNPYGFSHLRRVNEDNIDLNRNFVDFGKPLPVNSAYAEIHSLLLPATWPPTTESEARLDAWVAQHGRAAYQAAVSIGQYAFHDGMFYGGSRPTWSNRTLR 204          
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Match: A0A2W5SGP9_VARPD (DUF2817 domain-containing protein n=5 Tax=Burkholderiales TaxID=80840 RepID=A0A2W5SGP9_VARPD)

HSP 1 Score: 174 bits (441), Expect = 2.250e-50
Identity = 95/164 (57.93%), Postives = 112/164 (68.29%), Query Frame = 1
Query:   19 GEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALL-NDPLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPANPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIR--LAAQRDPGVSSGQASHPDGLFYAGTQPAWSNRTAR 501
            GE +  D A +G +DA  L IV+SGTHGPEGF GS CQ+A L +D LL R    +I++LL+HAVNP+GFSHL RTNEDNIDLNRN  DF RP P N  Y E+  L +P  WPPSAA E  LAA + +  L A R   VS GQ + PDGLFY G  P+WSNRT R
Sbjct:   43 GEVLAMDVARIGPADATRLLIVTSGTHGPEGFCGSGCQVATLRDDELLARFDAAKIALLLVHAVNPHGFSHLRRTNEDNIDLNRNHIDFGRPLPVNEGYAEVDPLAIPATWPPSAADEAALAAYIEKNGLRAYRTA-VSKGQYTVPDGLFYGGQMPSWSNRTIR 205          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58765.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521LID0_9HYPH4.060e-8678.44DUF2817 domain-containing protein n=1 Tax=Reyranel... [more]
A0A521QN34_9HYPH3.820e-8476.65DUF2817 domain-containing protein n=2 Tax=Reyranel... [more]
UPI001E5337E67.670e-8477.25M14 family metallopeptidase n=2 Tax=Reyranella Tax... [more]
A0A259MRZ4_9PROT1.280e-8276.51Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
UPI001FAC039D1.200e-5460.98M14 family metallopeptidase n=1 Tax=Variovorax sp.... [more]
UPI0019BD0A6E1.350e-5256.29DUF2817 domain-containing protein n=1 Tax=Candidat... [more]
UPI00037D4A5D4.190e-5255.03M14 family metallopeptidase n=1 Tax=Thiomonas sp. ... [more]
A0A853G8V6_9BURK1.400e-5156.10DUF2817 domain-containing protein n=1 Tax=Parapusi... [more]
A0A536ULW0_9PROT1.800e-5053.57DUF2817 domain-containing protein n=1 Tax=Betaprot... [more]
A0A2W5SGP9_VARPD2.250e-5057.93DUF2817 domain-containing protein n=5 Tax=Burkhold... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58765contigP-wetherbeei_contig58765:3..503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1205680.CAKO01000038_gene1990
PFAMsDUF2817
Model size501
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.85e-86
EggNOG OGsCOG2866@1|root,COG2866@2|Bacteria,1N6CX@1224|Proteobacteria,2U3MG@28211|Alphaproteobacteria,2JRWW@204441|Rhodospirillales
DescriptionProtein of unknown function (DUF2817)
Cds size501
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186869.4186997-CDS-P-wetherbeei_contig58765:2..5031683186869.4186997-CDS-P-wetherbeei_contig58765:2..503Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58765 3..503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58765.1.1prot_P-wetherbeei_contig58765.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58765 3..503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58765.1.1

>prot_P-wetherbeei_contig58765.1.1 ID=prot_P-wetherbeei_contig58765.1.1|Name=mRNA_P-wetherbeei_contig58765.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp
PLKATEGEEIGTDTALLGSSDAPLLFIVSSGTHGPEGFAGSACQLALLND
PLLQRATGNRISVLLIHAVNPYGFSHLTRTNEDNIDLNRNFSDFSRPYPA
NPVYEEIHDLLVPEAWPPSAAAEEKLAAAMIRLAAQRDPGVSSGQASHPD
GLFYAGTQPAWSNRTAR
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mRNA from alignment at P-wetherbeei_contig58765:3..503-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58765.1.1 ID=mRNA_P-wetherbeei_contig58765.1.1|Name=mRNA_P-wetherbeei_contig58765.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58765:3..503- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTGAAGGCCACCGAGGGCGAGGAGATCGGCACCGACACGGCCCTGCT CGGTTCCTCAGATGCCCCGCTCCTCTTCATCGTGAGTTCGGGTACGCACG GGCCGGAAGGTTTTGCAGGCTCCGCCTGCCAGCTCGCGCTGCTCAACGAC CCGCTGCTGCAGCGCGCGACAGGCAACAGGATCTCCGTGCTGCTGATCCA CGCCGTCAATCCCTACGGCTTCTCGCACCTCACGCGGACCAATGAGGACA ATATCGACCTCAACCGCAATTTCAGCGATTTCAGCCGGCCCTATCCCGCC AATCCCGTCTACGAGGAAATCCACGATCTGCTGGTCCCGGAGGCGTGGCC GCCGTCTGCGGCGGCCGAGGAGAAACTCGCCGCCGCCATGATCCGGCTGG CGGCGCAACGCGATCCCGGCGTCTCCAGCGGCCAGGCCAGCCATCCCGAC GGGCTCTTTTATGCCGGCACTCAGCCCGCCTGGAGCAACAGGACGGCGCG G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58765:3..503-

>mRNA_P-wetherbeei_contig58765.1.1 ID=mRNA_P-wetherbeei_contig58765.1.1|Name=mRNA_P-wetherbeei_contig58765.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58765:3..503- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTGAAGGCCACCGAGGGCGAGGAGATCGGCACCGACACGGCCCTGCT
CGGTTCCTCAGATGCCCCGCTCCTCTTCATCGTGAGTTCGGGTACGCACG
GGCCGGAAGGTTTTGCAGGCTCCGCCTGCCAGCTCGCGCTGCTCAACGAC
CCGCTGCTGCAGCGCGCGACAGGCAACAGGATCTCCGTGCTGCTGATCCA
CGCCGTCAATCCCTACGGCTTCTCGCACCTCACGCGGACCAATGAGGACA
ATATCGACCTCAACCGCAATTTCAGCGATTTCAGCCGGCCCTATCCCGCC
AATCCCGTCTACGAGGAAATCCACGATCTGCTGGTCCCGGAGGCGTGGCC
GCCGTCTGCGGCGGCCGAGGAGAAACTCGCCGCCGCCATGATCCGGCTGG
CGGCGCAACGCGATCCCGGCGTCTCCAGCGGCCAGGCCAGCCATCCCGAC
GGGCTCTTTTATGCCGGCACTCAGCCCGCCTGGAGCAACAGGACGGCGCG
G
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