mRNA_P-wetherbeei_contig58710.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58710.1.1
Unique NamemRNA_P-wetherbeei_contig58710.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A7C1V381_9CHLR (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1V381_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 2.060e-57
Identity = 99/167 (59.28%), Postives = 118/167 (70.66%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AI+ VDY GQ  DYDAL  IA   GL +VAD CHA+G  ++    G LA  SAFS HPVKHIT+GEGG +   D E A   R FRNHGITTDHR+R++  +  Y+MVDLGYNYRLTD+Q ALG SQL++L GW+ARR+EIA RYD+ FA MP + PL  R    HAY
Sbjct:  142 AIIAVDYTGQACDYDALRTIAGRHGLTLVADACHALGGSYKGRPVGSLAALSAFSFHPVKHITTGEGGMITTDDPELARRMRVFRNHGITTDHRQREQLGSWFYEMVDLGYNYRLTDIQCALGMSQLRKLPGWVARRQEIARRYDAVFAEMPAVGPLGVRDDVSHAY 308
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A1F9DZD9_9DELT (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Deltaproteobacteria bacterium RBG_19FT_COMBO_60_16 TaxID=1797855 RepID=A0A1F9DZD9_9DELT)

HSP 1 Score: 191 bits (484), Expect = 1.330e-56
Identity = 99/167 (59.28%), Postives = 117/167 (70.06%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AI+ VDYAGQ  DYDAL  +A   GLA+  D CHA+G +++    G LA  S FSLHPVKHITSGEGG V   D + A   R FRNHGITTDHR+R+   +  Y+MVDLGYNYRLTD Q ALG SQL +L  W+ RRREIAARYD+AFA  P ++PL  R  + HAY
Sbjct:  121 AIIAVDYAGQPCDYDALRALAERNGLALADDACHALGGRYKGRPVGSLADLSTFSLHPVKHITSGEGGMVTTDDPDLAKRMRLFRNHGITTDHRQREASGSWFYEMVDLGYNYRLTDFQCALGASQLGKLPVWVLRRREIAARYDAAFADAPGIRPLAVRPDAYHAY 287
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A7C8AZQ5_9DELT (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C8AZQ5_9DELT)

HSP 1 Score: 188 bits (478), Expect = 1.190e-55
Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AI+ VDYAGQ  DYDAL  +A   GLA+VAD CH++G  +     G LA  + FS HPVKHIT+GEGG V   + E AA  RRFRNHGI TDHR+R+   T AY MV+LGYNYRLTDLQAALG SQL +L GWL +RR++AA YD+  A++  ++PL  R+G +HAY
Sbjct:  131 AIIAVDYAGQPCDYDALRDLARVHGLALVADGCHSLGGSYRGRRVGTLADLTVFSFHPVKHITTGEGGMVVTDNRELAARMRRFRNHGIDTDHRQRETVGTWAYQMVELGYNYRLTDLQAALGTSQLAKLPGWLEKRRKLAAAYDTDLANVTAVRPLAVRSGDEHAY 297
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A3M1R3A4_9BACT (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A3M1R3A4_9BACT)

HSP 1 Score: 188 bits (478), Expect = 1.640e-55
Identity = 97/167 (58.08%), Postives = 118/167 (70.66%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AI+ VDYAGQ  DYDAL  IA   G+ +VAD CHA+G +++    G LA  + FSLHPVKHITSGEGG +  +D   AA  RRFRNHGITTDH +R    +  Y+MVDLGYNYRLTDLQ AL  SQL++L  W+ RR+ IA RYD+AFAS+P ++PL  R    HAY
Sbjct:  138 AIIAVDYAGQACDYDALQAIADRHGVPLVADACHALGGRYKGRPVGSLAVLNTFSLHPVKHITSGEGGVITTSDATLAARMRRFRNHGITTDHHQRATAGSWFYEMVDLGYNYRLTDLQCALALSQLRKLPTWVERRQAIARRYDTAFASLPAIQPLRVRPEVSHAY 304
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: UPI00196A4B59 (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Candidatus Chloroploca sp. Khr17 TaxID=2496869 RepID=UPI00196A4B59)

HSP 1 Score: 188 bits (478), Expect = 1.890e-55
Identity = 95/167 (56.89%), Postives = 121/167 (72.46%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AI+ VDYAGQ  DY+AL  +A+  GL I+AD CHA+G      + G LA  S FSLHPVKH T+GEGG +   D E A   R FRNHGIT+DHR+R+++ + AY+MVDLGYNYRL+D+Q ALG SQL +L GW+ RR+ IAARYD+AFA+M  ++PL  R  + HAY
Sbjct:  143 AIIAVDYAGQPCDYEALRVVAARHGLRIIADACHAVGGSDRGRAVGTLADLSTFSLHPVKHFTTGEGGLITTDDPELARRMRLFRNHGITSDHRQREQQGSWAYEMVDLGYNYRLSDIQCALGLSQLTKLRGWVERRQAIAARYDTAFAAMTSVRPLAVRPETTHAY 309
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: UPI001FF91748 (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Bradyrhizobium sp. 146 TaxID=2782622 RepID=UPI001FF91748)

HSP 1 Score: 187 bits (476), Expect = 2.200e-55
Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AIV VDY GQ ADYDAL  +A+ RG+ I+AD CHA GA ++    G +A  SAFS HPVKH+T+ EGG V   D E AA  RRFRNHGI +DHR R++  T +YDMV+LGYNYRL D+Q ALG SQL+RLS WL RR+ IAARYD  FA +P+++PL   +   +AY
Sbjct:  125 AIVAVDYGGQPADYDALRALAAGRGIRIIADACHAPGATYKDRKVGTIADISAFSFHPVKHLTTCEGGMVLTDDTEMAARMRRFRNHGIDSDHRSREKTGTFSYDMVELGYNYRLPDIQCALGISQLRRLSHWLDRRQAIAARYDEMFADVPFVRPLTTHSDRTNAY 291
[Close]
BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A838RPQ0_9CHLR (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RPQ0_9CHLR)

HSP 1 Score: 186 bits (473), Expect = 9.810e-55
Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AIV VDYAGQ  DYDAL+ IA++  LAI+AD CHA+GA++   + G LA  SAFS HPVKHIT+GEGG +   D   A   R FRNHGIT+DHRER+++ +  Y+MVDLGYNYRLTDLQ ALG +QL+ L  WL RR+ IA RYD+AF  M  ++PL  R    HAY
Sbjct:  138 AIVAVDYAGQPCDYDALSIIAAKHDLAILADSCHALGARYRGAAVGTLADLSAFSFHPVKHITTGEGGMITTNDPVLAQKMRLFRNHGITSDHREREQKGSWFYEMVDLGYNYRLTDLQCALGINQLRDLPAWLERRQAIARRYDAAFGEMAAIRPLGARIDVSHAY 304
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A7S7UPF6_9BRAD (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A7S7UPF6_9BRAD)

HSP 1 Score: 186 bits (471), Expect = 1.260e-54
Identity = 96/167 (57.49%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AIV VDY GQ ADYDAL  +A++RG+ +VAD CHA GA ++    G +A  SAFS HPVKH+T+ EGG V   D E AA  RRFRNHGI +DHR R++  T AYDMV+LGYNYRL D+Q ALG +QLKRL  W++ R+ IAARYD  FA +P+++PL  R    +AY
Sbjct:  125 AIVAVDYGGQPADYDALRALAAKRGIGLVADACHAPGATYKGRKVGTIADLSAFSFHPVKHLTTCEGGMVLTNDLEMAAHMRRFRNHGIDSDHRSREKAGTFAYDMVELGYNYRLPDVQCALGIAQLKRLPQWISDRQAIAARYDKMFADLPFVRPLATRPDRTNAY 291
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BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A2V8HXP8_9BACT (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8HXP8_9BACT)

HSP 1 Score: 186 bits (471), Expect = 1.860e-54
Identity = 93/167 (55.69%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            A++ VDYAGQ ADYD+L  I   RG+++VAD CH+IG        G LA  S FS HPVKH+T+GEGG V   +   A   R FRNHGI +DHR+R+ +   AYDMV+LGYNYR+TD+Q ALG  QL+RL  ++ARRR+IAARYD+AFA +P ++PL  R G++HAY
Sbjct:  139 AVIAVDYAGQPADYDSLAAILKPRGISLVADACHSIGGASNGRPVGTLARLSCFSFHPVKHVTTGEGGAVVADEAPLADRMRVFRNHGIVSDHRQREAQGAFAYDMVELGYNYRITDIQCALGLQQLERLPAFIARRRQIAARYDAAFAQLPAVRPLAVRRGAEHAY 305
[Close]
BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Match: A0A497B693_9CHLR (UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497B693_9CHLR)

HSP 1 Score: 185 bits (470), Expect = 2.440e-54
Identity = 97/167 (58.08%), Postives = 117/167 (70.06%), Query Frame = 1 
Query:    1 AIVPVDYAGQMADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVKHITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLGYNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRRTGSDHAY 501
            AI+ VDYAGQ  DYDAL  IA   GL +VAD CHA+G  ++    G LA  SAFS HPVKHIT+GEGG +   D + A   R FRNHGITTDHR+R+++ +  Y+MVDLGYN RLTD Q ALG SQL +L GW+ARR++IA RYD AFA M  ++PL  R    HAY
Sbjct:  137 AIIAVDYAGQACDYDALRAIADRHGLTLVADACHALGGGYKGRPVGSLADLSAFSFHPVKHITTGEGGMITTDDPDLARRMRVFRNHGITTDHRQREQQGSWFYEMVDLGYNCRLTDFQCALGMSQLCKLPGWVARRQKIARRYDEAFAEMLAVEPLAVREEVSHAY 303
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58710.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1V381_9CHLR2.060e-5759.28UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A1F9DZD9_9DELT1.330e-5659.28UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A7C8AZQ5_9DELT1.190e-5558.08UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A3M1R3A4_9BACT1.640e-5558.08UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
UPI00196A4B591.890e-5556.89UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
UPI001FF917482.200e-5558.08UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A838RPQ0_9CHLR9.810e-5558.68UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A7S7UPF6_9BRAD1.260e-5457.49UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A2V8HXP8_9BACT1.860e-5455.69UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]
A0A497B693_9CHLR2.440e-5458.08UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosami... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58710contigP-wetherbeei_contig58710:2..502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1521187.JPIM01000048_gene86
PFAMsDegT_DnrJ_EryC1
Model size501
Max annot lvl200795|Chloroflexi
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-47
EggNOG OGsCOG0399@1|root,COG0399@2|Bacteria,2G7XI@200795|Chloroflexi
DescriptionDegT/DnrJ/EryC1/StrS aminotransferase family
Cds size471
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.671347-CDS-P-wetherbeei_contig58710:1..4721683186868.671347-CDS-P-wetherbeei_contig58710:1..472Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58710 2..472 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.6804032-UTR-P-wetherbeei_contig58710:472..5021683186868.6804032-UTR-P-wetherbeei_contig58710:472..502Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig58710 473..502 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58710.1.1prot_P-wetherbeei_contig58710.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58710 2..472 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58710.1.1

>prot_P-wetherbeei_contig58710.1.1 ID=prot_P-wetherbeei_contig58710.1.1|Name=mRNA_P-wetherbeei_contig58710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
MADYDALNRIASERGLAIVADRCHAIGAKHERLSAGDLATASAFSLHPVK
HITSGEGGFVALADGERAAAARRFRNHGITTDHRERDRRVTHAYDMVDLG
YNYRLTDLQAALGRSQLKRLSGWLARRREIAARYDSAFASMPWLKPLVRR
TGSDHAY
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mRNA from alignment at P-wetherbeei_contig58710:2..502-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58710.1.1 ID=mRNA_P-wetherbeei_contig58710.1.1|Name=mRNA_P-wetherbeei_contig58710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58710:2..502- (Phaeothamnion wetherbeei SAG_119_79)
GCGATCGTGCCGGTCGATTACGCGGGACAGATGGCTGACTATGACGCGCT
CAACAGGATTGCCAGCGAACGCGGGCTTGCAATCGTTGCTGACCGCTGTC
ACGCGATCGGCGCCAAACATGAGCGCTTGTCTGCCGGCGACCTCGCGACC
GCCAGCGCGTTTTCGTTGCATCCGGTCAAGCACATCACCTCGGGCGAAGG
AGGGTTCGTCGCACTCGCCGACGGCGAGCGCGCTGCCGCTGCGCGTCGCT
TTCGCAATCACGGCATCACAACCGATCACCGCGAGCGCGACAGGCGGGTG
ACACATGCCTACGACATGGTCGATCTCGGATACAATTATCGGCTTACTGA
TCTGCAGGCCGCCCTGGGTCGCAGCCAGCTGAAGCGGCTTTCCGGCTGGC
TCGCGCGGCGCCGGGAAATCGCCGCTCGTTACGATTCTGCGTTTGCCAGC
ATGCCTTGGCTCAAGCCGCTCGTAAGGCGAACTGGATCAGATCATGCCTA
T
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58710:2..502-

>mRNA_P-wetherbeei_contig58710.1.1 ID=mRNA_P-wetherbeei_contig58710.1.1|Name=mRNA_P-wetherbeei_contig58710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig58710:2..502- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGACTATGACGCGCTCAACAGGATTGCCAGCGAACGCGGGCTTGC
AATCGTTGCTGACCGCTGTCACGCGATCGGCGCCAAACATGAGCGCTTGT
CTGCCGGCGACCTCGCGACCGCCAGCGCGTTTTCGTTGCATCCGGTCAAG
CACATCACCTCGGGCGAAGGAGGGTTCGTCGCACTCGCCGACGGCGAGCG
CGCTGCCGCTGCGCGTCGCTTTCGCAATCACGGCATCACAACCGATCACC
GCGAGCGCGACAGGCGGGTGACACATGCCTACGACATGGTCGATCTCGGA
TACAATTATCGGCTTACTGATCTGCAGGCCGCCCTGGGTCGCAGCCAGCT
GAAGCGGCTTTCCGGCTGGCTCGCGCGGCGCCGGGAAATCGCCGCTCGTT
ACGATTCTGCGTTTGCCAGCATGCCTTGGCTCAAGCCGCTCGTAAGGCGA
ACTGGATCAGATCATGCCTAT
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