mRNA_P-wetherbeei_contig5870.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5870.1.1
Unique NamemRNA_P-wetherbeei_contig5870.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: D8LF27_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF27_ECTSI)

HSP 1 Score: 652 bits (1682), Expect = 4.120e-226
Identity = 321/377 (85.15%), Postives = 351/377 (93.10%), Query Frame = 1
Query:   22 ARVVHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            A VVHVLPYAEDLEG++G+ ++TF++PFFE E+KPLRK +TF TKGAMRTVEFKVM I TATEE+AEYC +N+DT IL +GE LK      RD+DES+NE+GYDDIGGC+RQLAQIRELIELPLRHPQLFN VGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAF++AE N+PAIIFIDEIDSIAPRRDKAGGE EKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIG+PDE+GRLEVLRIKTR MKL DDV+L QIAKDTHGFVGADLSQLCMEAAL+CIRE+M  IDV+ADKIP E+LDGLAI+N+HFKYALQHCNPSALRETLVEVPNVSW+
Sbjct:  260 ATVVHVLPYAEDLEGVTGETFETFLQPFFEGEFKPLRKGDTFQTKGAMRTVEFKVMDIATATEEEAEYCYINEDTEILYEGEALK------RDDDESLNEIGYDDIGGCKRQLAQIRELIELPLRHPQLFNAVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFDDAEANSPAIIFIDEIDSIAPRRDKAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQIAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWK 630          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: A0A835YZ06_9STRA (Valosin-containing protein, isoform CRA_a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ06_9STRA)

HSP 1 Score: 629 bits (1622), Expect = 2.470e-219
Identity = 309/377 (81.96%), Postives = 345/377 (91.51%), Query Frame = 1
Query:   22 ARVVHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            A VV +LPYAED+EGISGD+++TF+EPFF+ E+KPLRK NT +TKGAMRTVEFKVMSI T  E+DAEYC VN DT IL DG+PLK      RD+DES++EVGYDDIGGCR+QL QIRELIELPLRHPQLFN+VGIPPPRGVLMYGPPGCGKTMIARAVA+ETGAYCFTINGPEIMSKLSGESETNLRKAFEEAE NAPAIIFIDEIDSIA RRDKAGGE EKR+VSQLLTLMDGIKPTSHVVVI ATNRPN+I+PALRRFGRFDREL I  PDE+GRLE+LRIKTR MKL++DV+LEQ+A+DTHGFVGADL+QLCMEAAL CIR+KMDVIDV+AD IP EILD LA+SN+HF+++LQ CNPSALRETLVEVPNVSW+
Sbjct:  213 ASVVQLLPYAEDVEGISGDLFETFVEPFFDGEFKPLRKGNTIVTKGAMRTVEFKVMSIATEGEDDAEYCYVNADTEILVDGDPLK------RDDDESLDEVGYDDIGGCRKQLGQIRELIELPLRHPQLFNSVGIPPPRGVLMYGPPGCGKTMIARAVAAETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEANAPAIIFIDEIDSIAARRDKAGGELEKRVVSQLLTLMDGIKPTSHVVVIGATNRPNIIDPALRRFGRFDRELSIMQPDEEGRLEILRIKTRTMKLAEDVDLEQLARDTHGFVGADLAQLCMEAALYCIRQKMDVIDVDADTIPVEILDNLAVSNDHFRHSLQTCNPSALRETLVEVPNVSWK 583          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: A0A7S2V5J3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5J3_9STRA)

HSP 1 Score: 580 bits (1495), Expect = 1.100e-198
Identity = 279/375 (74.40%), Postives = 330/375 (88.00%), Query Frame = 1
Query:   25 RVVHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSW 1149
            + V V+PYAED+EG+SGD+++TFI+P+FEE Y+PLR+ +TF+ + AMR+VEFKV  IDT  EEDA+YCIV  DT ++ + EP+K SE      DE +NE+GYDDIGGCR+QL  IREL+ELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIA+AVA+ETGA+  TINGPE+MSKL+GESETNLRKAFEEAE NAPAIIF+DEIDSIAP+RDKAGGE EKRIVS LLTLMD IKPTSHVVVIAATNRPN+I+PALRRFGRFDRELDIGVPD+DGRLEVLRIKTR+MK+   ++LE IAK+THGFVGADLSQLCMEAALQC+REK + ID++A+ I AE+LD L I+N+HF++AL  CNPSALRE  VEVP+V+W
Sbjct:  204 KQVAVVPYAEDIEGLSGDLFETFIKPYFEENYRPLRRGDTFVARAAMRSVEFKVTLIDTVDEEDADYCIVVPDTELMLEEEPIKRSE------DERLNELGYDDIGGCRKQLGLIRELVELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIAQAVAAETGAFLITINGPEVMSKLAGESETNLRKAFEEAEANAPAIIFLDEIDSIAPKRDKAGGEVEKRIVSSLLTLMDSIKPTSHVVVIAATNRPNIIDPALRRFGRFDRELDIGVPDDDGRLEVLRIKTRNMKIDQSLDLEAIAKETHGFVGADLSQLCMEAALQCVREKSEEIDIDAESIEAEVLDSLCITNDHFRHALTVCNPSALRENYVEVPDVTW 572          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: A0A7S0IYK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IYK9_9EUKA)

HSP 1 Score: 530 bits (1366), Expect = 2.790e-183
Identity = 258/374 (68.98%), Postives = 318/374 (85.03%), Query Frame = 1
Query:   31 VHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            VH+LP  + +EG+SG+++D F++P+F E Y+P+RK + F+ +G MR VEFKV+  D       EYCIV  DTVI C+GEP+K      R+++E M++VGYDDIGG R+QLA IREL+ELPLRHPQLF ++G+ PPRG+LMYGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKN+PAIIFIDEIDSIAP+R+K  GE E+RIVSQLLTLMDGIK  +HVVVI ATNRPN I+ ALRRFGRFDRE+DIGVPDE+GRLEVLRI T++MKLS+DV+LE +AK+THG+VGAD++QLC EAA+QCIREKMDVID++ D+I AEILD +A+S EHF+ AL   NPSALRET+VEVPNVSW+
Sbjct:   69 VHILPIDDTIEGVSGNLFDVFLKPYFLEAYRPVRKNDLFLVRGGMRAVEFKVVETD-----PDEYCIVAPDTVIHCEGEPIK------REDEERMDDVGYDDIGGVRKQLANIRELVELPLRHPQLFKSIGVKPPRGILMYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGIKARAHVVVIGATNRPNSIDGALRRFGRFDREIDIGVPDENGRLEVLRIHTKNMKLSEDVDLEALAKETHGYVGADIAQLCTEAAMQCIREKMDVIDLDDDEIDAEILDAMAVSQEHFRTALGTSNPSALRETVVEVPNVSWE 431          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: K8E910_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8E910_9CHLO)

HSP 1 Score: 539 bits (1388), Expect = 3.760e-183
Identity = 260/380 (68.42%), Postives = 324/380 (85.26%), Query Frame = 1
Query:   10 VRVCARVVHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSW 1149
            V+  AR+ HVLP+ + +EG+SG+++D +++P+F E Y+P+RK +TF+ +G MR VEFKV+  D      AEYCIV  DT I C+GEP+      +R+++E ++EVGYDD+GG R+Q+AQIREL+ELPLRHPQLF T+G+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKN+PAIIFIDE+DSIAP+RDK  GE E+RIVSQLLTLMDG+K  SH++V+AATNRPN I+PALRRFGRFDRE+DIGVPDE GRLEV+RI T++MKL ++V+LE +AKDTHGFVGADL+ LC EAALQCIREKMDVID+E D+I AEILD +AISN+HFK AL   NPSALRET+VEVPNVSW
Sbjct:  130 VKYGARI-HVLPFGDTIEGVSGNLFDVYLKPYFLEAYRPVRKGDTFLARGGMRAVEFKVVETD-----PAEYCIVAPDTEIFCEGEPI------NREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEVDSIAPKRDKTNGEVERRIVSQLLTLMDGLKARSHIIVMAATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVMRIHTKNMKLDEEVDLEVVAKDTHGFVGADLAALCTEAALQCIREKMDVIDLEDDEIDAEILDSMAISNDHFKTALAQTNPSALRETVVEVPNVSW 497          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: M2WWD9_GALSU (AAA-type ATPase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WWD9_GALSU)

HSP 1 Score: 537 bits (1383), Expect = 6.820e-183
Identity = 259/374 (69.25%), Postives = 321/374 (85.83%), Query Frame = 1
Query:   31 VHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            VH+LP+ + +EG++G+++DT+++P+F E Y+P+RK +TF+ +G MR VEFKV+  D       EYCIV  DTVI C+GEP+K      R+++E +++VGYDDIGGCR+QLAQIRELIELP+RHPQLF +VGI PP+GVL+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKNAP+IIFIDEIDSIAP+R+K  GE E+RIVSQLLTLMDG+K  S V+VIAATNRPN I+PALRRFGRFDRE+DIGVPDE+GRLE+LRI TR+MKL  DV+LE+IAKDTHG+VGAD++QLC EAA QCIREKMD+ID+E + I AEILD LA++ EHFK+AL   NPSALRET VE+PNV+W+
Sbjct:  125 VHILPFEDSIEGLTGNLFDTYLKPYFLEAYRPVRKGDTFLVRGGMRAVEFKVVETD-----PGEYCIVAPDTVIHCEGEPIK------REDEERLDDVGYDDIGGCRKQLAQIRELIELPIRHPQLFRSVGIKPPKGVLLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGLKSRSQVMVIAATNRPNSIDPALRRFGRFDREIDIGVPDENGRLEILRIHTRNMKLDPDVDLERIAKDTHGYVGADIAQLCTEAAFQCIREKMDLIDLEDEHIDAEILDSLAVTQEHFKFALGQSNPSALRETHVEIPNVTWE 487          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: UPI001248794D (cell division cycle protein 48 homolog n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001248794D)

HSP 1 Score: 527 bits (1358), Expect = 2.180e-182
Identity = 249/374 (66.58%), Postives = 319/374 (85.29%), Query Frame = 1
Query:   31 VHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            VH+LP  + +EG+SG+++D F++P+F E Y+P+RK + F+ +G MR+VEFKV+  D       EYC+V  DT I C+G+P+K      R+++E +NEVGYDD+GG R+Q+AQIREL+ELPLRHPQLF ++G+ PP+G+L+YGPPG GKT+IARA+A+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKNAP+IIFIDEIDSIAP+R+K  GE E+RIVSQLLTLMDG+K  +HV+V+ ATNRPN I+PALRRFGRFDRE+DIGVPDE GRLEVLRI T++MKL+DDV+LE+++KDTHG+VGADL+ LC EAALQCIREKMDVID+E + I AE+L+ +A++NEHF+ AL   NPSALRET+VEVPNVSW+
Sbjct:   74 VHILPIDDTIEGVSGNLFDVFLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETD-----PGEYCVVAPDTEIFCEGDPIK------REDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAIANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQSALGTSNPSALRETVVEVPNVSWE 436          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: A0A067G1F3_CITSI (Uncharacterized protein (Fragment) n=2 Tax=Citrus sinensis TaxID=2711 RepID=A0A067G1F3_CITSI)

HSP 1 Score: 524 bits (1350), Expect = 3.900e-182
Identity = 247/376 (65.69%), Postives = 320/376 (85.11%), Query Frame = 1
Query:   25 RVVHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            R VH+LP  + +EG++G+++D +++P+F E Y+P+RK + F+ +G MR+VEFKV+  D       EYC+V  DT I C+GEP+K      R+++E +NEVGYDD+GG R+Q+AQIREL+ELPLRHPQLF ++G+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKNAP+IIFIDE+DSIAP+R+K  GE E+RIVSQLLTLMDG+K  +HV+V+ ATNRPN I+PALRRFGRFDRE+DIGVPDE GRLE+LRI T++MKL++DV+LE++AKDTHG+VG+DL+ LC EAALQCIREKMDVID+E + I AE+L+ +A++NEHF+ AL   NPSALRET+VEVPNVSW+
Sbjct:  124 RRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIETD-----PGEYCVVAPDTEIFCEGEPVK------REDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEILRIHTKNMKLAEDVDLERVAKDTHGYVGSDLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWE 488          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: A0A1D6GQ45_MAIZE (Cell division cycle protein 48 n=3 Tax=Poaceae TaxID=4479 RepID=A0A1D6GQ45_MAIZE)

HSP 1 Score: 528 bits (1361), Expect = 5.080e-182
Identity = 255/374 (68.18%), Postives = 318/374 (85.03%), Query Frame = 1
Query:   31 VHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSWQ 1152
            VH+LP  + +EGI+G+++D F++P+F E Y+PLRK + F+ +G MR+VEFKV+  D      AEYCIV  DT I CDGEP+K      R+++E ++EVGYDD+GG R+Q+AQIREL+ELPLRHPQLF ++G+ PP+G+L+YGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKNAP+IIFIDEIDSIAP+R+K  GE E+RIVSQLLTLMDG+K  SHV+V+ ATNRPN I+PALRRFGRFDRE+DIGVPDE GRLEVLRI T++MKL++DV LE I+KDTHG+VGADL+ LC EAALQCIREKMD+ID+E + I AEIL+ +A++N+HFK AL   NPSALRET+VEVPNVSW+
Sbjct:   31 VHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETD-----PAEYCIVAPDTEIFCDGEPIK------REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWE 393          
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Match: A0A7S0ZAC4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAC4_9RHOD)

HSP 1 Score: 535 bits (1378), Expect = 6.460e-182
Identity = 257/373 (68.90%), Postives = 320/373 (85.79%), Query Frame = 1
Query:   31 VHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFITKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRDEDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLMYGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEAEKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDDVELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILDGLAISNEHFKYALQHCNPSALRETLVEVPNVSW 1149
            VH+LP+ + +EG++G+++DT+++P+F E Y+P+RK +TF+ +G MR VEFKV+  D       EYCIV  DTVI C+GE +K      R+++E ++++GYDDIGG R+QLAQIREL+ELPLRHPQLF +VG+ PPRG+LMYGPPG GKT+IARAVA+ETGA+ F INGPEIMSKL+GESE+NLRKAFEEAEKNAPAIIFIDEIDSIAP+R+K  GE E+RIVSQLLTLMDGIK  SHVVVIAATNRPN I+PALRRFGRFDRELDIGVPDE+GRLE+LRI T++MKL  DV+LE+++K+THG+VGAD++QLC EAALQCIREKMD+ID+E D+I AEILD LA++ +HF ++L   NPSALRET VEVPNV+W
Sbjct:  138 VHILPFEDTIEGLTGNLFDTYLKPYFLEAYRPVRKNDTFLVRGGMRAVEFKVVETD-----PEEYCIVAPDTVIHCEGESIK------REDEERLDDIGYDDIGGVRKQLAQIRELVELPLRHPQLFKSVGVKPPRGILMYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGIKARSHVVVIAATNRPNTIDPALRRFGRFDRELDIGVPDENGRLEILRIHTKNMKLDPDVDLEKVSKETHGYVGADMAQLCTEAALQCIREKMDIIDLEDDEIDAEILDSLAVTQDHFNFSLGTSNPSALRETAVEVPNVTW 499          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5870.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF27_ECTSI4.120e-22685.15Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YZ06_9STRA2.470e-21981.96Valosin-containing protein, isoform CRA_a n=1 Tax=... [more]
A0A7S2V5J3_9STRA1.100e-19874.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0IYK9_9EUKA2.790e-18368.98Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
K8E910_9CHLO3.760e-18368.42Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
M2WWD9_GALSU6.820e-18369.25AAA-type ATPase n=1 Tax=Galdieria sulphuraria TaxI... [more]
UPI001248794D2.180e-18266.58cell division cycle protein 48 homolog n=1 Tax=Que... [more]
A0A067G1F3_CITSI3.900e-18265.69Uncharacterized protein (Fragment) n=2 Tax=Citrus ... [more]
A0A1D6GQ45_MAIZE5.080e-18268.18Cell division cycle protein 48 n=3 Tax=Poaceae Tax... [more]
A0A7S0ZAC4_9RHOD6.460e-18268.90Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5870contigP-wetherbeei_contig5870:1..3580 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LF27
PFAMsAAA,CDC48_2,CDC48_N,Vps4_C
Model size1179
Max annot lvl2759|Eukaryota
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
Exons8
Evalue6.75e-227
EggNOG OGsCOG0464@1|root,KOG0730@2759|Eukaryota
DescriptionATP binding
Cds size1179
COG categoryO
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5870.1.1prot_P-wetherbeei_contig5870.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5870 1..3580 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.5261977-CDS-P-wetherbeei_contig5870:0..1261683186868.5261977-CDS-P-wetherbeei_contig5870:0..126Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 1..126 +
1683186868.538904-CDS-P-wetherbeei_contig5870:371..4281683186868.538904-CDS-P-wetherbeei_contig5870:371..428Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 372..428 +
1683186868.5490525-CDS-P-wetherbeei_contig5870:574..6851683186868.5490525-CDS-P-wetherbeei_contig5870:574..685Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 575..685 +
1683186868.55927-CDS-P-wetherbeei_contig5870:1100..12431683186868.55927-CDS-P-wetherbeei_contig5870:1100..1243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 1101..1243 +
1683186868.5713508-CDS-P-wetherbeei_contig5870:2091..24511683186868.5713508-CDS-P-wetherbeei_contig5870:2091..2451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 2092..2451 +
1683186868.590057-CDS-P-wetherbeei_contig5870:2669..27301683186868.590057-CDS-P-wetherbeei_contig5870:2669..2730Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 2670..2730 +
1683186868.6085055-CDS-P-wetherbeei_contig5870:2973..31431683186868.6085055-CDS-P-wetherbeei_contig5870:2973..3143Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 2974..3143 +
1683186868.6167474-CDS-P-wetherbeei_contig5870:3429..35801683186868.6167474-CDS-P-wetherbeei_contig5870:3429..3580Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5870 3430..3580 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5870.1.1

>prot_P-wetherbeei_contig5870.1.1 ID=prot_P-wetherbeei_contig5870.1.1|Name=mRNA_P-wetherbeei_contig5870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=393bp
MFCVRVCARVVHVLPYAEDLEGISGDVYDTFIEPFFEEEYKPLRKENTFI
TKGAMRTVEFKVMSIDTATEEDAEYCIVNKDTVILCDGEPLKASEHLHRD
EDESMNEVGYDDIGGCRRQLAQIRELIELPLRHPQLFNTVGIPPPRGVLM
YGPPGCGKTMIARAVASETGAYCFTINGPEIMSKLSGESETNLRKAFEEA
EKNAPAIIFIDEIDSIAPRRDKAGGETEKRIVSQLLTLMDGIKPTSHVVV
IAATNRPNVIEPALRRFGRFDRELDIGVPDEDGRLEVLRIKTRHMKLSDD
VELEQIAKDTHGFVGADLSQLCMEAALQCIREKMDVIDVEADKIPAEILD
GLAISNEHFKYALQHCNPSALRETLVEVPNVSWQVCFRSVLF*
back to top

mRNA from alignment at P-wetherbeei_contig5870:1..3580+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5870.1.1 ID=mRNA_P-wetherbeei_contig5870.1.1|Name=mRNA_P-wetherbeei_contig5870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3580bp|location=Sequence derived from alignment at P-wetherbeei_contig5870:1..3580+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTTGTGTCCGTGTCTGCGCGCGGGTGGTGCACGTGTTGCCGTACGC GGAGGACTTGGAAGGCATCTCGGGGGACGTCTACGATACGTTCATTGAAC CGTTTTTCGAGGAGGAGTACAAGCCGGTGCGTCTCGTCGTTTCCTTTTCG GGGGGTTCTGTCTCTTCCCCCGCAAAAAATTCCGGCAGATCCTTTAACAA ACGGGATGTCTTGAAAAGTTGTGAGGCTTTTTCTGCTTCTGCCTTGCGCG TGCCTGCATTGCTAGGCTTGAAAGAAGGCAGACGTGACCGCCACGGCCGC TCCATCTCTAAGCCATGCTCCTGGTGCTCTGCCATCGCCGGCCCTACCCC AAACGGTCATTCTTTCCGCAGCTTCGCAAGGAGAACACCTTCATCACCAA GGGCGCCATGCGAACCGTCGAGTTCAAGGTCAGCCCCCCACGGCTTTATT GGATGTTTGAGGGAGGCGTTCCTTCTGTTGCTGACTTTGCGGACATGGCA GTGTATCCTCGTCCGAGCTATATCACGCCGCTGACAGATCCGCCCTGTTC TTCTTTTTCTGCTGCCTGCTATAGGTGATGAGCATCGACACGGCGACAGA GGAGGATGCCGAGTACTGCATTGTCAATAAGGACACTGTCATCCTCTGCG ACGGGGAGCCCCTCAAGGCGAGCGAGCATCTGCATGTTCTAACAATGCTA CTAATTACGGCAGTTTGGCACACGGTGTGGCTGGTGCAGCTCTCCTTTGT GTCTTGTGTCCGCAGAGGCAACATTCGCAGCGCAAGCCATCCACCACCCT TTCAGTGATGGCGTGAGGTTGGGGATGCTTTGGAACGTCGTTCTTAGAGC GTTGCCACCTTGCCGCTAGGCATCTGCCTCTCCTTGCCAAAAAGTCAGCA CAAGAATTGGTTGTGCGCGTGTCGTCATCCTTCTGCCTGCGCTAGCATTT GTCATTCTCTTTCTTATTCTAAGCTGCAATGGCGTCCTATGGGCATTTGT CTTTCTCTTTCTTACTCTAAGCTGCAATGGCATCCTGTGGCCTCCAATGG GCCGACCTGCTCCGATCCGGTCTTTCTCGCCTTTGTTCACCACCCGGCAG CGCGACGAGGACGAGTCGATGAACGAGGTGGGGTACGACGACATCGGAGG CTGCCGCCGCCAGCTGGCCCAAATCCGCGAGCTCATCGAGCTGCCGTTGC GCCACCCCCAGCTCTTCAACACCGTTGGCATCCCGCCGCCTAGGTGCGCC ATCTGCCGCCGCTGTCGGTCGGTTTTCTTTTTCATTCGGTCCTTTTCCAC GCGCGCCGCGTAGTTTCTTTTTTTCTTCCTCCGTCTCACATCGTCCTATC GCTAGGCAGGCGTTACGATGAGAGATCCGGCCTATGGTGCACGGTGTCTC GTTTGGTTGATCAGTCATCGTCATGCGTTGCGTATCTCTGTCTGCCGTTG CGAGCGGAACCTAGGGCAGCGGGGAGGAAAAGGATAAGAAGTTCTGCCGC TCTGCTGCTGGGGCTCCGCCGGCGCAAAGCCGGGCTGCAGCGGAGGTTTA TTTGTGAGGAAGTTCCATTTTTGTGATGGTCCGCTGCATCGCTCGTCGGC GGCTTTCGGTATGGGCTTGAAAACTGCGAGGCGTGCCTCGCCCCGGGTCC TTTGGCGTGGAAAGGACTGCCGAGAGTTGCTGTAGTCTTTCTGTGCAGCC GTCTGGAGTCAGACCGCGACGATCGGTGGAGAATATCTCTCCGAGCTTTC GGCGTGTACGTGTCATCAACGCGCGGAAAGGCTGCTAATCGATAGGCTAC GGTTTGCGGCGGTGGGCCAAAGAAGGACGGGTGCGGACGAGCCGATTTGC TGCAGAAGGAGAACGGCCCCACTATTTACTTCTCTCGGACGGCTCCGCTC TCGCCCTCCGGTAGGGCCGCGGCTGTAGAGCGCGTGGCAGAGCTATCCTT TGTTCTGTCAGCTGCTGCTGCGAGGTGTTTGTTTCTTGCGCTGCTCGTCC CTGGCTCTGCAGCTGCCCCTGTCACCGCATCAGTTGATCACCCAGTAATT GCTCCCTGGACCTGCCTGGCAACTACGTCCTCTCGTCGCAGAGGCGTGCT GATGTATGGTCCGCCGGGCTGCGGCAAGACGATGATCGCGCGCGCTGTGG CGTCGGAGACGGGCGCCTACTGCTTCACCATCAATGGCCCCGAAATCATG AGCAAGCTGAGTGGTGAGTCCGAGACTAACCTGCGCAAGGCCTTCGAGGA GGCCGAGAAGAACGCGCCCGCCATAATCTTCATCGACGAGATCGACTCGA TCGCGCCGCGGCGTGACAAAGCCGGCGGCGAGACGGAGAAACGCATCGTG TCGCAACTGCTGACGCTGATGGACGGCATCAAGCCCACGAGCCACGTCGT GGTCATCGCGGCCACCAACCGACCAAATGTCATCGAGCCTGCGCTGCGCC GGTAAGCAAAAGGGGAAGAAGGAGGGTTCTGTTTTTTCGCTTACCGTTTT GCGTTCGGCGCGTCCCATTCTTCCCTCGCTTAGCGCTGGATTTATACACT TTGGATTCCTCTTCTCTGCCCTTCGAGGATTATGAGGAATGGTCGCATGT GACAGCACCTACCTAGGTGACGCGCCTGCTTGTCCTCTTTCCTCTTCTTC GTTTTTCCCTCGCCTGCAGCTTCGGCCGCTTCGACCGCGAGCTCGACATC GGCGTCCCCGACGAAGACGGCCGGCTCGAGGTCAGTAATGGCGGAGTGTA AACGCCGTTGATGCAGTACCCCGCTTCGAAAACTTCGAATCGGCTCCAGA ACTTACTTTCTTCATTGCGACTCCTCTCCCGGTCTGCTTTCCTAATCTGC TGCGCCCTGGCTGCGATTAGTTGCCAAATCAACCATGGCGTTACTGGCCG GTGCGACCGACAATAGACTTGAAACAAAACTCCATTTTTCAACCCCCAAA CCCTTCATCGTTCGTGCCTCCAGGTGCTGCGGATTAAGACGCGGCACATG AAGCTGTCGGACGACGTGGAGCTGGAACAGATCGCCAAAGACACGCACGG CTTCGTCGGCGCCGACCTGTCGCAGCTCTGCATGGAGGCTGCGCTGCAGT GCATACGCGAGAAGATGGACGTTATCGACGTCGAGGCCGACAAGTGAGAG ATCCAGCTGGGCGGATGGGCGGGACGACGATGACGGGAGTGAATACATGG CACCTGCAAAGGGGGAGAGAGGGAAGTGGGGCTCTTGACGGTCCGGCTTT CGGGTGTCTTATGGATATTTGAATTCCCACCTTAGAAACCTTTTACTTTG CATGCAAACCAATTAGAAGCGCCGACTTAAATAACGATATTTACGCTCGC CATAGTGACTGGTGCCTAAATTGACCCGCCTGCACTGTTGTCCCTGCGGC GGCGATCTCGCCCGTTCTCGCCTTGGTAGGATCCCGGCGGAGATTTTGGA TGGCCTCGCCATCTCGAACGAGCACTTCAAGTATGCCCTCCAGCACTGCA ACCCGTCGGCGCTCCGGGAGACGCTCGTGGAAGTGCCAAACGTGTCGTGG CAGGTGTGTTTCCGTTCCGTTCTATTCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5870:1..3580+

>mRNA_P-wetherbeei_contig5870.1.1 ID=mRNA_P-wetherbeei_contig5870.1.1|Name=mRNA_P-wetherbeei_contig5870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1179bp|location=Sequence derived from alignment at P-wetherbeei_contig5870:1..3580+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTTGTGTCCGTGTCTGCGCGCGGGTGGTGCACGTGTTGCCGTACGC
GGAGGACTTGGAAGGCATCTCGGGGGACGTCTACGATACGTTCATTGAAC
CGTTTTTCGAGGAGGAGTACAAGCCGCTTCGCAAGGAGAACACCTTCATC
ACCAAGGGCGCCATGCGAACCGTCGAGTTCAAGGTGATGAGCATCGACAC
GGCGACAGAGGAGGATGCCGAGTACTGCATTGTCAATAAGGACACTGTCA
TCCTCTGCGACGGGGAGCCCCTCAAGGCGAGCGAGCATCTGCATCGCGAC
GAGGACGAGTCGATGAACGAGGTGGGGTACGACGACATCGGAGGCTGCCG
CCGCCAGCTGGCCCAAATCCGCGAGCTCATCGAGCTGCCGTTGCGCCACC
CCCAGCTCTTCAACACCGTTGGCATCCCGCCGCCTAGAGGCGTGCTGATG
TATGGTCCGCCGGGCTGCGGCAAGACGATGATCGCGCGCGCTGTGGCGTC
GGAGACGGGCGCCTACTGCTTCACCATCAATGGCCCCGAAATCATGAGCA
AGCTGAGTGGTGAGTCCGAGACTAACCTGCGCAAGGCCTTCGAGGAGGCC
GAGAAGAACGCGCCCGCCATAATCTTCATCGACGAGATCGACTCGATCGC
GCCGCGGCGTGACAAAGCCGGCGGCGAGACGGAGAAACGCATCGTGTCGC
AACTGCTGACGCTGATGGACGGCATCAAGCCCACGAGCCACGTCGTGGTC
ATCGCGGCCACCAACCGACCAAATGTCATCGAGCCTGCGCTGCGCCGCTT
CGGCCGCTTCGACCGCGAGCTCGACATCGGCGTCCCCGACGAAGACGGCC
GGCTCGAGGTGCTGCGGATTAAGACGCGGCACATGAAGCTGTCGGACGAC
GTGGAGCTGGAACAGATCGCCAAAGACACGCACGGCTTCGTCGGCGCCGA
CCTGTCGCAGCTCTGCATGGAGGCTGCGCTGCAGTGCATACGCGAGAAGA
TGGACGTTATCGACGTCGAGGCCGACAAGATCCCGGCGGAGATTTTGGAT
GGCCTCGCCATCTCGAACGAGCACTTCAAGTATGCCCTCCAGCACTGCAA
CCCGTCGGCGCTCCGGGAGACGCTCGTGGAAGTGCCAAACGTGTCGTGGC
AGGTGTGTTTCCGTTCCGTTCTATTCTGA
back to top