mRNA_P-wetherbeei_contig5867.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5867.3.1
Unique NamemRNA_P-wetherbeei_contig5867.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A3C1L3M7_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1L3M7_9ACTN)

HSP 1 Score: 764 bits (1973), Expect = 9.870e-277
Identity = 416/442 (94.12%), Postives = 429/442 (97.06%), Query Frame = 1
Query:   46 LAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEAERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDTDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPAAPAE 1371
            +AFLTVALAAVAVFA LTMLSARNEVSGLTDRQR+DDL+ATAIAAGDAY+RADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHG+A+VDTPRGDPV+AAVVVDG +VGAVMLRFPTQAMEAERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALT+AAGDLAAGRRD RV TDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTD VDLADV ASAADLLQPLADDRDTALTVDTEPA VIGDADRLHQIAVNL+ANAIKFTPAGGAI I TRTDGATATLEV+DNGPGIPEQDL HVFERFWRGVNGDKASGSGIGLAVVAELVA HQGTVTA NVPGGGARF VT+PAAPA+
Sbjct:    1 MAFLTVALAAVAVFAALTMLSARNEVSGLTDRQRKDDLTATAIAAGDAYQRADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGLASVDTPRGDPVSAAVVVDGHSVGAVMLRFPTQAMEAERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTSAAGDLAAGRRDTRVATDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDPVDLADVTASAADLLQPLADDRDTALTVDTEPAMVIGDADRLHQIAVNLIANAIKFTPAGGAIAIHTRTDGATATLEVIDNGPGIPEQDLAHVFERFWRGVNGDKASGSGIGLAVVAELVAAHQGTVTAANVPGGGARFAVTLPAAPAQ 442          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A349B482_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B482_9ACTN)

HSP 1 Score: 413 bits (1062), Expect = 4.440e-138
Identity = 257/450 (57.11%), Postives = 303/450 (67.33%), Query Frame = 1
Query:   16 LLGPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEA-ERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDTD-GPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPA 1359
            +L PL VR+A+AF+TVA+AAVAVFA L ++SA +EVS L       D  A A AA  AYE A GW  ADL+ AAAVAAR QA LT++DA+G V+AAP    A MM +MHG+  +D  R DP+A  VVVDG  VG V LRFPT  + A ER +R AL R A LG  +A G A++VA  V+  V+RP+ ALTTAA  LAAGRRD RVD D  PGE+  LA AF+ MA  +D EDRLRR LVADVAHE+RTPL+ILQG+TEAL+DGV    P  L SL++EV RL  LVGDLETLAAA+AAGLR   D VDLAD   +     +  A   +  L V  EPA V GD  RL Q+A  LLANA+ +TP GG+I I T T G  A LEV D GPGI   DLP +F+RF+RG      SGSGIGLAV  EL   H GTVTA N   GGA FTVT+PA
Sbjct:    6 ILSPLSVRIAVAFVTVAVAAVAVFAGLMLVSANDEVSSLVVETHRQDAEAVADAAAQAYEHAGGWQDADLSSAAAVAARGQAELTVIDADGAVLAAPASEAAEMMARMHGVEILDVERDDPLARPVVVDGARVGTVELRFPTSHLPAPEREIRHALVRNAWLGAALAVGSAVLVAGVVARAVSRPINALTTAAQHLAAGRRDVRVDLDDAPGEIGALAAAFDRMAVAVDEEDRLRRQLVADVAHEVRTPLSILQGTTEALVDGVLPADPATLISLHEEVLRLSSLVGDLETLAAADAAGLRLDVDYVDLADEVRAVVSGAEASAVAAELTLDVSLEPAPVAGDPRRLRQLATTLLANALAYTPPGGSIRITTSTAGGQALLEVSDTGPGIDPVDLPRIFDRFYRGRRTADTSGSGIGLAVARELAVAHGGTVTATNGAIGGAVFTVTLPA 455          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A2E0RRF9_9ACTN (Histidine kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RRF9_9ACTN)

HSP 1 Score: 375 bits (964), Expect = 2.940e-123
Identity = 231/454 (50.88%), Postives = 291/454 (64.10%), Query Frame = 1
Query:    1 VARRPLLGPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEA-ERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVD-TDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMP 1356
            + RR  L PLG+RLA AF+ VA+AA++V A L ++ AR+ VS L      +D  A A+AA  AYER  GW+ ADLA A A+AAR QATLT+ D NG +++A TD LA MM++MHG+  VDT RG+PV A VVVD   VG + LRFP   +   ER +R  L R  +LG L+A             RVTRP+ ALT A   + AG    RV+ +D PGELRTLA  FN MA  +++ED LRR LVADVAHELRTPL IL+G+TEAL+DGV +P    + SL++EV RL  LV DL TLA A+AA L  R + VDL  V AS A+L +  AD  D  L  + EPA  + DA+R+ QI   L+ NA+ +TP GG IT+ T  +   A + V D+GPGI   DLPHVFERF+RG    +  GSGIGLAV  ELVA   G ++A N P  GA FTV +P
Sbjct:    1 MTRRAPLSPLGLRLAAAFVVVAVAALSVLAALMVVGARSGVSDLVADVHAEDARAAAVAAAQAYERTGGWSGADLAPAVAIAARGQATLTVRDINGRLLSASTDELAEMMLRMHGVQFVDTDRGEPVHADVVVDDARVGTIELRFPDSHLPTPERQIRSVLFRNVLLGALLAXXXXXXXXXXXXXRVTRPIVALTAAVEGVGAGEPGVRVELSDAPGELRTLAATFNRMAAAVEQEDHLRRQLVADVAHELRTPLTILRGTTEALVDGVAEPDDGTMQSLHEEVLRLAHLVDDLHTLATADAANLHVRLEPVDLVRVVASVAELARAAADAADIELRTELEPALALADAERVKQIVSTLVGNALVYTPTGGTITLHTAAETGAAVITVSDSGPGIEPVDLPHVFERFYRGTTA-QGIGSGIGLAVAHELVAALGGDISAANDPDRGAVFTVRIP 453          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A2E0RW69_9ACTN (Histidine kinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RW69_9ACTN)

HSP 1 Score: 352 bits (903), Expect = 1.550e-114
Identity = 216/425 (50.82%), Postives = 276/425 (64.94%), Query Frame = 1
Query:   10 RPLLGPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEA-ERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDT-DGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAE 1278
            R LL PLG+RLA AF+ VA+A + V ATL ++ A++ VS L      +D  A AIAAG AYE+A GW+ ADL+ A A+AAR QATLT+ D  G +V A +D LA MM++MHG+   D  R  PV++ V VDG  VG V L+FP   +   ER VRD L R   LGVL             + RVTRP+ ALTTA  D+ A +   RVD  D PGELRTLA  FN MA+ ++RED+LRR LVADVAHELRTPL IL+G+TE+L+DG+ +P    LGSL++EV RL  LV DL TLAAA+AA L  R   VD+A +  + ADL    A+    +++ D + AA   D +R+ QI   L+ NA+ +TP GG IT+R  +DG  AT++V D GPGI   DLPHVFERF+RG N  +  GSG GLAV +E
Sbjct:    5 RSLLSPLGIRLAAAFVLVAVAGLVVLATLMVVGAQSGVSELVADVHAEDARAAAIAAGQAYEQAGGWSGADLSNAVAIAARGQATLTVRDDAGRLVTASSDELAEMMLRMHGVQLTDVARSGPVSSPVTVDGAAVGTVDLQFPDSHLPGPERQVRDVLVRNVFLGVLXXXXXXXXXXXXXARRVTRPIAALTTAVHDVGARQPGVRVDVPDAPGELRTLATTFNDMAEAIEREDQLRRRLVADVAHELRTPLTILRGTTESLVDGIAEPDDATLGSLHEEVLRLSHLVDDLHTLAAADAAVLHVRRRDVDVATLVGAVADLAAGAAEAAGISISTDLDQAAAFADPERVTQIVSTLVGNALVYTPTGGTITLRAYSDGGHATIQVSDTGPGIDPDDLPHVFERFYRGRNA-QGVGSGTGLAVASE 428          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A3D5DSE0_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3D5DSE0_9ACTN)

HSP 1 Score: 347 bits (891), Expect = 2.640e-112
Identity = 219/453 (48.34%), Postives = 276/453 (60.93%), Query Frame = 1
Query:   22 GPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAA----PTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEA-ERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVD-TDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPAA 1362
            G LG RLALAF+ V          LT+++   +VSGL   Q++D +++ A+A G AY  ADGW  ADL  A  VAA   A L ++D +G+VV      P+  +A MM   H    +  P G P+ AAV VDG  VG  +LRFP   + A E+ VR  L +T  LG  +AA +AL V+ +++ R+TRP+  LT     + +G+  AR      PGE+  LA AF+ MA  L+RED LR+ L+ADVAHELRTP+ ILQ   E L DG +  TP  L SL DEV RL RLV DLETLAAAEAAGL+      DL+   AS ADLL P  +  D  L    EP  V GD  RL Q+  NLL NA+KF+ +GG +T+ T      A LEV D GPGIPEQ+LPH+F+RFWRG  G +A+GSGIGLAVVAELV  H G V   + PG G RFTV +P A
Sbjct:    7 GRLGSRLALAFVAVXXXXXXXXXXLTLIATGTQVSGLAASQQQDTMNSVAVALGQAYRGADGWEHADLRPAYTVAASVGARLQVLDEHGQVVVPQGFDPSQMMAGMMGGSHMGGGMSGPVGQPMQAAVTVDGARVGTAVLRFPGSGLTAAEQRVRTGLEQTVALGAGLAAVLALAVSWFIARRITRPLVRLTRTVALVESGQHGARSGLASAPGEIGELAVAFDRMAGALEREDSLRQQLLADVAHELRTPITILQAYCEQLADGTEPATPARLASLRDEVLRLGRLVTDLETLAAAEAAGLQMIKAPTDLSVATASVADLLGPAFEAADVELVTRLEPVMVEGDVTRLSQVVTNLLTNALKFSASGGKVTLTTGASDGLARLEVTDEGPGIPEQELPHIFDRFWRGAAGRRAAGSGIGLAVVAELVRAHAGRVHVASEPGRGTRFTVLLPRA 459          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A6P2BXH8_9ACTN (Histidine kinase n=1 Tax=Trebonia kvetii TaxID=2480626 RepID=A0A6P2BXH8_9ACTN)

HSP 1 Score: 321 bits (822), Expect = 1.020e-101
Identity = 220/463 (47.52%), Postives = 282/463 (60.91%), Query Frame = 1
Query:   28 LGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEAERHV-RDALARTAILGVL-IAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDT-DGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGAT---------------ATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPAA 1362
            LG+RLALAFL +ALAA+A+ A LT + +  +VS L  RQR +  SA A+AAG +++   GW + DL     +A +S   L + DA G  VAA +           G A+   PR    +A VVV G+ VG+V++      + A   V R AL R AI G   +AA +AL+  L V+ R+TRPV  L +    +A G R AR     GPGELR LA AF+ MAD LD ED++RR+LVA VAHELRTP+A+LQ   EALLDGV +P P+ LGSL DEV RL R+V DL+T+AAA+AA LR   +R DLA +AA+AAD L    +     L    +PA V+ D   +HQ+  NLL NA+KFTPAGG +TIRT   GA                A LEV D G GIP  +LP +F+RFWRG    + SGSGIGLA+ AEL   H GT+TAD+ PG G R T+T+P A
Sbjct:   29 LGMRLALAFLGIALAAIALVAVLTAVFSAVDVSSLASRQRAELASAFAVAAGSSWQLNHGWVSTDLIPIVELAEQSGVQLQVRDAAGHAVAATS-----------GFASAPGPRD---SAPVVVRGQRVGSVLVGLTASGLGAADDVLRTALLR-AIAGTAGLAALLALLTGLGVARRITRPVARLISVTRAMAGGDRSARAGAIRGPGELRELAAAFDQMADTLDHEDKIRRDLVASVAHELRTPVAVLQAGHEALLDGVIEPGPDELGSLRDEVVRLARMVDDLQTMAAADAAVLRLVRERRDLAGIAAAAADSLARRFEAAGVTLNRLLDPAPVLADERWMHQVVTNLLGNALKFTPAGGTVTIRTGLAGAXXXXXXXXXXXXXXXXAVLEVADTGVGIPADELPRIFDRFWRGQAAAQTSGSGIGLAIAAELTLAHGGTLTADSRPGEGTRLTLTLPGA 476          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A7K0JXF8_9ACTN (Histidine kinase n=1 Tax=Acidiferrimicrobium australe TaxID=2664430 RepID=A0A7K0JXF8_9ACTN)

HSP 1 Score: 314 bits (805), Expect = 1.520e-99
Identity = 212/450 (47.11%), Postives = 254/450 (56.44%), Query Frame = 1
Query:   19 LGPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRF-PTQAMEAERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDTD-GPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPAA 1362
            LGPLG RLA AF+ VAL A+  +A LT+L+ R  V GL    R     A    A +AY  + GWA ADL     +A  S A   + D +G V           + Q      + + RG PV+  VVVDG  VG V L F P      ER +R AL+  A+LGV          AL VS  V RP+  L+ A   L  G R  RV    G GEL  L   F+ M   LD  D  R+ ++ADVAHELRTPLAILQ  TEAL+DGV   TPE LGS++DE  RL R+VGDL+ LA+AEAAGL     RVDLA VAA AAD L    +     L     PA V GD  RLHQ+ VNLL NA KFTP GG + +  R  G  A L V D+GPGIP  +   VF+RF+RG  G   +G+GIGLAVVA+LV  H GTV      GGGARFTV++PAA
Sbjct:    7 LGPLGRRLAAAFVAVALVALGSYALLTVLAERAGVGGLARTHRAVTAGAVVSVASNAYRASGGWAGADLGPVRVLADLSSAAARLSDQDGRV-----------LFQTGSARLLTSARGAPVSRPVVVDGAVVGRVRLAFAPDGLTSPERRLRQALSNAAVLGVXXXXXXXXXXALTVSTFVVRPIRRLSAATAALGRGDRSVRVGASAGRGELSELGAVFDDMVTALDEADAARQAMIADVAHELRTPLAILQAETEALVDGVRPATPEALGSVHDETIRLGRIVGDLQALASAEAAGLSLERRRVDLATVAAEAADALAGRFESSGVGLDRRLAPAPVDGDPQRLHQVVVNLLTNAGKFTPEGGTVRLDVRLVGGAAELSVTDSGPGIPADEQGRVFQRFYRGSAGRHTAGTGIGLAVVAQLVHAHGGTVCVTTPAGGGARFTVSLPAA 445          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A838SSM3_9ACTN (Histidine kinase n=1 Tax=Euzebyales bacterium TaxID=2740540 RepID=A0A838SSM3_9ACTN)

HSP 1 Score: 310 bits (794), Expect = 8.870e-98
Identity = 205/441 (46.49%), Postives = 251/441 (56.92%), Query Frame = 1
Query:   37 RLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEA-ERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDTDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMP 1356
            RLA+AF+ VALAA+ V A LT  +AR +++   +  R         A   AY  A  W  ADL  A  +AA + ATL IV  +G VVA P  A+ +MM  MHG  A   P GDP   ++ VDG  +G   LRFP   +   E  +  AL RTA+L  ++AA         V+ R+TRP+  L TAA    AG   ARVD    GE+  +  AFN MAD L R  R +R L   VAHELRTP AILQ S EALLDGV+QP+ E L SL+DEV RL+R + DLE+L+AAEAA L       +LA VA  AA  L P     D  L    +   V  DADRL Q+  NLLANA+KFTPAGG +T+ TR     A L V D G GIP  D   VFERFWRG N +   G G+GLA+V ELV  H G VT  +  G G+ F V +P
Sbjct:   15 RLAIAFVAVALAAIVVVALLTFAAARAQIASFAESSRTSTAEFIGAALESAYAEAGDWREADLTPAVTLAAAAPATLQIVATDGTVVADPGLAMNNMMASMHGGDA--GPLGDPRPVSLSVDGAPIGTATLRFPADELPGGEAQLLAALGRTALLSAVVAAXXXXXXXXLVAQRITRPLRTLATAARRFGAGDPAARVDAVAAGEIGEVGAAFNRMADVLARRARQQRELAGTVAHELRTPTAILQASLEALLDGVEQPSTEQLASLHDEVLRLQRNIADLESLSAAEAAELTLMLATTNLASVATGAASALAPQFASGDVTLRTVLQDVDVQADADRLRQVVTNLLANALKFTPAGGDVTLSTRARDGDAELSVADTGVGIPADDQERVFERFWRGRNAEGVGGRGVGLAIVVELVRAHGGAVTVISQVGRGSTFFVRLP 453          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A349B2H8_9ACTN (Histidine kinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B2H8_9ACTN)

HSP 1 Score: 305 bits (780), Expect = 5.730e-97
Identity = 183/352 (51.99%), Postives = 222/352 (63.07%), Query Frame = 1
Query:  319 ASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAMEA-ERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARVDTD-GPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPAAPA 1368
            A MM +MHG+  ++  R +PV  A+VVDG+ VG V LRFP   +   ER +R AL R A LG  +                  P+ ALT AA  L  GRRD RVD D  PGE+  LA AF+ MA  +D+ED+LRR LVADVAHE+RTPL+ILQG+TEAL+DGV  P P  L SL+DEV RL  LVGDLETLAAA+AAGLR   + +DLAD   +     +  A   +  L V  EPA V+GDA RL Q+   L+ANA+ +TP GG I + TRTDG    LEV D G GI   +L  VF+RF+RG     +SGSGIGLA+  EL A H G VTA N P GGA FTV +PAAPA
Sbjct:    2 AEMMARMHGVEILEVDRDEPVEQAIVVDGREVGTVGLRFPASHLPGPEREIRQALVRNAWLGAALXXXXXXXXXXXXXXXXXXPINALTAAARQLEGGRRDVRVDLDDAPGEIGALASAFDRMAAAVDKEDQLRRQLVADVAHEVRTPLSILQGTTEALVDGVLPPDPATLASLHDEVLRLSGLVGDLETLAAADAAGLRLVLESLDLADEVRAVVGGAEASAAAGELTLDVSLEPAPVVGDARRLRQLTTTLVANALAYTPPGGTIQVSTRTDGHQVLLEVTDTGHGIDPDELGRVFDRFYRGRRTAASSGSGIGLAIARELAAAHGGGVTATNAPAGGAVFTVKLPAAPA 353          
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Match: A0A537XTX2_9ACTN (Histidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537XTX2_9ACTN)

HSP 1 Score: 296 bits (759), Expect = 2.130e-92
Identity = 207/463 (44.71%), Postives = 273/463 (58.96%), Query Frame = 1
Query:    4 ARRPLLGPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQREDDLSATAIAAGDAYERAD----GWATADLAGAAAVAARSQATLTIVDANGEVVAAPTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAME-AERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDLAAGRRDARV-DTDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELRTPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEAAGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRLHQIAVNLLANAIKFTPAGGAITIRTRT----DGATATLEVVDNGPGIPEQDLPHVFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVTMPAA 1362
            +R  ++GPL  RLALAFL VAL A+A+F+ L +++   EV+ L  RQ++   +  A AA  AY  A+    GW    L    A+A      + ++D +G  V               G     +P G  V   VVV G+ VG++++ F    +  ++RH+R+AL  T  +G   AA +AL  A+ VS R+TRPV ALT     + +G + ARV D   PGEL  LA AF+ MAD L  ED LRR  VADVAHELRTPL +LQ + EA+ DGV    P  L S++DEV RL ++V DLETLAAA+A GL      VDLA+VAA A  +L+P  +  D +L     P +V+GDADRLHQ+  NLL NA+KFTPA G + I T      DG  A L V D+G GIP  +LPHVF+RFWRG    + +GSGIGL VV  LV  H+GTV+ ++ P  G R T+T  AA
Sbjct:   12 SRPTVVGPLTARLALAFLAVALGALALFSVLMLVATAREVADLARRQQDQTAADVAQAARVAYATAERDGVGWDGTHLETLRALAHLGGGEVVVLDGSGRAV--------------DGSPPKTSP-GRVVQRDVVVGGRRVGSMLVAFSRGGLPGSDRHLRNALIETVAVGAGAAALLALGAAIAVSRRITRPVVALTETVRAVESGDKSARVGDIGAPGELGALAGAFDRMADALALEDSLRRIQVADVAHELRTPLTVLQATLEAMADGVVAAGPGQLASVHDEVLRLIKIVEDLETLAAADATGLVLDPGPVDLANVAARALAMLRPRFEAADLSLEARLTPVSVLGDADRLHQVVTNLLTNALKFTPAPGRVQIETGPGEGPDGGGAYLSVADSGVGIPPDELPHVFDRFWRGSQAARVAGSGIGLTVVQRLVEAHKGTVSIESRPAEGTRVTLTFRAA 459          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5867.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1L3M7_9ACTN9.870e-27794.12Histidine kinase n=1 Tax=Acidimicrobiaceae bacteri... [more]
A0A349B482_9ACTN4.440e-13857.11Histidine kinase n=1 Tax=Acidimicrobiaceae bacteri... [more]
A0A2E0RRF9_9ACTN2.940e-12350.88Histidine kinase n=1 Tax=Acidimicrobiaceae bacteri... [more]
A0A2E0RW69_9ACTN1.550e-11450.82Histidine kinase (Fragment) n=1 Tax=Acidimicrobiac... [more]
A0A3D5DSE0_9ACTN2.640e-11248.34Histidine kinase n=1 Tax=Actinomycetia bacterium T... [more]
A0A6P2BXH8_9ACTN1.020e-10147.52Histidine kinase n=1 Tax=Trebonia kvetii TaxID=248... [more]
A0A7K0JXF8_9ACTN1.520e-9947.11Histidine kinase n=1 Tax=Acidiferrimicrobium austr... [more]
A0A838SSM3_9ACTN8.870e-9846.49Histidine kinase n=1 Tax=Euzebyales bacterium TaxI... [more]
A0A349B2H8_9ACTN5.730e-9751.99Histidine kinase (Fragment) n=1 Tax=Acidimicrobiac... [more]
A0A537XTX2_9ACTN2.130e-9244.71Histidine kinase n=1 Tax=Actinomycetia bacterium T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5867contigP-wetherbeei_contig5867:1417..2790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog35754.JNYJ01000089_gene6361
PFAMsHAMP,HATPase_c,HisKA
Model size1374
Max annot lvl201174|Actinobacteria
KEGG koko:K07642
KEGG Pathwayko02020,map02020
KEGG ModuleM00450,M00645,M00646,M00648
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.06e-86
EggNOG OGsCOG0642@1|root,COG2205@2|Bacteria,2I2QY@201174|Actinobacteria,4DHBZ@85008|Micromonosporales
EC2.7.13.3
DescriptionHis Kinase A (phosphoacceptor) domain
Cds size1374
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.1220937-CDS-P-wetherbeei_contig5867:1416..27901683186868.1220937-CDS-P-wetherbeei_contig5867:1416..2790Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5867 1417..2790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5867.3.1prot_P-wetherbeei_contig5867.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5867 1417..2790 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5867.3.1

>prot_P-wetherbeei_contig5867.3.1 ID=prot_P-wetherbeei_contig5867.3.1|Name=mRNA_P-wetherbeei_contig5867.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=458bp
VARRPLLGPLGVRLALAFLTVALAAVAVFATLTMLSARNEVSGLTDRQRE
DDLSATAIAAGDAYERADGWATADLAGAAAVAARSQATLTIVDANGEVVA
APTDALASMMMQMHGMAAVDTPRGDPVAAAVVVDGKNVGAVMLRFPTQAM
EAERHVRDALARTAILGVLIAAGVALVVALYVSVRVTRPVTALTTAAGDL
AAGRRDARVDTDGPGELRTLAEAFNGMADHLDREDRLRRNLVADVAHELR
TPLAILQGSTEALLDGVDQPTPEILGSLNDEVTRLRRLVGDLETLAAAEA
AGLRPRTDRVDLADVAASAADLLQPLADDRDTALTVDTEPAAVIGDADRL
HQIAVNLLANAIKFTPAGGAITIRTRTDGATATLEVVDNGPGIPEQDLPH
VFERFWRGVNGDKASGSGIGLAVVAELVAVHQGTVTADNVPGGGARFTVT
MPAAPAE*
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mRNA from alignment at P-wetherbeei_contig5867:1417..2790+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5867.3.1 ID=mRNA_P-wetherbeei_contig5867.3.1|Name=mRNA_P-wetherbeei_contig5867.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1374bp|location=Sequence derived from alignment at P-wetherbeei_contig5867:1417..2790+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCGCGTCGTCCGCTGCTCGGCCCGCTCGGGGTCCGACTCGCCCTGGC ATTCCTGACCGTCGCCCTGGCGGCTGTCGCAGTGTTCGCCACGCTGACGA TGCTGTCGGCGCGCAACGAGGTCTCCGGGCTCACCGATCGCCAGCGTGAA GACGACCTGTCGGCCACGGCGATCGCAGCCGGCGACGCCTACGAGCGCGC CGACGGCTGGGCTACTGCGGACCTGGCTGGCGCTGCGGCGGTCGCCGCAA GGAGCCAGGCGACGTTGACCATCGTCGACGCCAACGGCGAAGTGGTCGCA GCGCCGACCGATGCGCTGGCGTCGATGATGATGCAGATGCACGGCATGGC CGCCGTGGACACTCCTCGCGGTGATCCCGTCGCTGCGGCTGTCGTCGTCG ACGGCAAGAACGTCGGGGCGGTGATGCTGCGATTCCCGACCCAGGCAATG GAAGCCGAACGCCACGTCCGCGACGCGCTCGCGCGCACTGCGATCCTCGG GGTACTGATCGCTGCCGGTGTGGCCCTCGTCGTCGCGCTGTACGTCTCGG TGCGTGTCACGCGACCGGTCACTGCGCTCACCACCGCCGCAGGCGACCTC GCCGCGGGCCGTCGCGACGCTCGGGTCGACACCGATGGCCCCGGCGAGTT GCGCACGCTCGCCGAGGCGTTCAACGGGATGGCCGATCATCTCGATCGCG AGGACCGGCTCCGTCGCAACCTCGTTGCTGACGTCGCCCACGAACTGCGC ACACCACTCGCGATTCTGCAGGGGTCGACCGAGGCACTCCTCGACGGCGT CGACCAGCCGACCCCCGAGATCCTCGGTTCGCTCAACGACGAGGTCACCC GCCTGCGCCGACTCGTCGGTGACCTGGAAACGCTCGCTGCCGCCGAAGCA GCCGGCCTGCGACCCCGCACCGATCGCGTCGATCTCGCCGACGTCGCGGC ATCCGCCGCCGACCTGCTGCAGCCCTTGGCCGACGACCGCGACACCGCCC TGACGGTCGATACCGAGCCGGCCGCGGTGATCGGTGACGCCGACCGGTTG CACCAGATCGCGGTCAACCTGCTCGCGAACGCCATCAAGTTCACCCCCGC GGGCGGTGCGATCACCATCCGCACCCGCACGGACGGAGCCACCGCGACGC TCGAGGTCGTCGACAACGGCCCCGGAATCCCCGAACAGGACCTGCCGCAC GTGTTCGAACGGTTCTGGCGTGGCGTGAACGGCGACAAGGCCAGCGGCAG CGGCATCGGTCTCGCCGTCGTCGCCGAGCTGGTCGCCGTGCACCAGGGCA CGGTCACCGCTGACAACGTGCCCGGCGGGGGAGCCCGCTTCACGGTCACG ATGCCGGCGGCCCCCGCCGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5867:1417..2790+

>mRNA_P-wetherbeei_contig5867.3.1 ID=mRNA_P-wetherbeei_contig5867.3.1|Name=mRNA_P-wetherbeei_contig5867.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1374bp|location=Sequence derived from alignment at P-wetherbeei_contig5867:1417..2790+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCGCGTCGTCCGCTGCTCGGCCCGCTCGGGGTCCGACTCGCCCTGGC
ATTCCTGACCGTCGCCCTGGCGGCTGTCGCAGTGTTCGCCACGCTGACGA
TGCTGTCGGCGCGCAACGAGGTCTCCGGGCTCACCGATCGCCAGCGTGAA
GACGACCTGTCGGCCACGGCGATCGCAGCCGGCGACGCCTACGAGCGCGC
CGACGGCTGGGCTACTGCGGACCTGGCTGGCGCTGCGGCGGTCGCCGCAA
GGAGCCAGGCGACGTTGACCATCGTCGACGCCAACGGCGAAGTGGTCGCA
GCGCCGACCGATGCGCTGGCGTCGATGATGATGCAGATGCACGGCATGGC
CGCCGTGGACACTCCTCGCGGTGATCCCGTCGCTGCGGCTGTCGTCGTCG
ACGGCAAGAACGTCGGGGCGGTGATGCTGCGATTCCCGACCCAGGCAATG
GAAGCCGAACGCCACGTCCGCGACGCGCTCGCGCGCACTGCGATCCTCGG
GGTACTGATCGCTGCCGGTGTGGCCCTCGTCGTCGCGCTGTACGTCTCGG
TGCGTGTCACGCGACCGGTCACTGCGCTCACCACCGCCGCAGGCGACCTC
GCCGCGGGCCGTCGCGACGCTCGGGTCGACACCGATGGCCCCGGCGAGTT
GCGCACGCTCGCCGAGGCGTTCAACGGGATGGCCGATCATCTCGATCGCG
AGGACCGGCTCCGTCGCAACCTCGTTGCTGACGTCGCCCACGAACTGCGC
ACACCACTCGCGATTCTGCAGGGGTCGACCGAGGCACTCCTCGACGGCGT
CGACCAGCCGACCCCCGAGATCCTCGGTTCGCTCAACGACGAGGTCACCC
GCCTGCGCCGACTCGTCGGTGACCTGGAAACGCTCGCTGCCGCCGAAGCA
GCCGGCCTGCGACCCCGCACCGATCGCGTCGATCTCGCCGACGTCGCGGC
ATCCGCCGCCGACCTGCTGCAGCCCTTGGCCGACGACCGCGACACCGCCC
TGACGGTCGATACCGAGCCGGCCGCGGTGATCGGTGACGCCGACCGGTTG
CACCAGATCGCGGTCAACCTGCTCGCGAACGCCATCAAGTTCACCCCCGC
GGGCGGTGCGATCACCATCCGCACCCGCACGGACGGAGCCACCGCGACGC
TCGAGGTCGTCGACAACGGCCCCGGAATCCCCGAACAGGACCTGCCGCAC
GTGTTCGAACGGTTCTGGCGTGGCGTGAACGGCGACAAGGCCAGCGGCAG
CGGCATCGGTCTCGCCGTCGTCGCCGAGCTGGTCGCCGTGCACCAGGGCA
CGGTCACCGCTGACAACGTGCCCGGCGGGGGAGCCCGCTTCACGGTCACG
ATGCCGGCGGCCCCCGCCGAGTAG
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