prot_P-wetherbeei_contig58571.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58571.1.1
Unique Nameprot_P-wetherbeei_contig58571.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length167
Homology
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: UPI00143CE604 (fimbria/pilus outer membrane usher protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI00143CE604)

HSP 1 Score: 258 bits (660), Expect = 5.170e-79
Identity = 127/167 (76.05%), Postives = 152/167 (91.02%), Query Frame = 0
Query:    1 VFHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEIDAVS 167
            +FHDFG+  N+G+FAG+TIP+GPSASIS+G+A+G+GG+  S+DAVQS G EPGS GWR+HAA+GA  DR+ASVSYRSNYGT+ AG SETNS++SAAL LRGSITTMDGG+FLSNWIDDGFAVVN G+PGVAV HENRPAGVTDS+GMLL+PSLRAYQ+NK+EID V+
Sbjct:  505 IFHDFGSGKNTGIFAGVTIPLGPSASISSGIAKGQGGMTASIDAVQSPGLEPGSYGWRLHAAQGAVIDRQASVSYRSNYGTVQAGVSETNSSSSAALELRGSITTMDGGVFLSNWIDDGFAVVNVGVPGVAVLHENRPAGVTDSQGMLLLPSLRAYQRNKIEIDPVN 671          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: UPI000699EEC3 (fimbria/pilus outer membrane usher protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI000699EEC3)

HSP 1 Score: 253 bits (647), Expect = 5.930e-77
Identity = 128/166 (77.11%), Postives = 144/166 (86.75%), Query Frame = 0
Query:    1 VFHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEIDAV 166
            +F DFGT  N+GVFAGLTIPIGPSAS+S GV++G GGI GSVDAVQSLGPEPGS GWRV  A+GA TDR ASVSYRSNYG I AG S+TNSA SAAL LRGSIT+M G +FLSNW+DDGFAVVN G+PGV V HENRPAGVTDS+GMLL+P+LRAYQKNK+E+D V
Sbjct:  528 IFRDFGTTKNTGVFAGLTIPIGPSASVSTGVSRGPGGITGSVDAVQSLGPEPGSYGWRVREADGAVTDRLASVSYRSNYGMIQAGVSQTNSATSAALELRGSITSMGGDIFLSNWVDDGFAVVNVGVPGVTVLHENRPAGVTDSQGMLLVPALRAYQKNKIEVDPV 693          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A560LNK1_9BRAD (Outer membrane usher protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A560LNK1_9BRAD)

HSP 1 Score: 218 bits (554), Expect = 1.940e-63
Identity = 111/164 (67.68%), Postives = 136/164 (82.93%), Query Frame = 0
Query:    1 VFHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEID 164
            VFHDFG++ N+G+FAGL++PIG SASI++GV+ GR G + SVDAV+SLGPEPGS GWRVH +EG+A+ R A+ SYRS+YGTI AGAS+  S+A  +L LRGSITT+ GG+FLSNWIDD FAVV  G+P V V +ENR AGVTDSRGMLLIP LR+YQ NK+ ID
Sbjct:  546 VFHDFGSKRNTGIFAGLSMPIGDSASITSGVSSGRSGTIASVDAVRSLGPEPGSYGWRVHDSEGSASYREATASYRSSYGTIQAGASQAGSSAVGSLELRGSITTIGGGVFLSNWIDDSFAVVTTGVPDVEVLNENRWAGVTDSRGMLLIPMLRSYQNNKIAID 709          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A6P1BVT7_9BRAD (Fimbrial biogenesis outer membrane usher protein (Fragment) n=1 Tax=Bradyrhizobium uaiense TaxID=2594946 RepID=A0A6P1BVT7_9BRAD)

HSP 1 Score: 212 bits (539), Expect = 9.300e-63
Identity = 109/164 (66.46%), Postives = 131/164 (79.88%), Query Frame = 0
Query:    1 VFHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEID 164
            VFHDF T+ N+GVFAGL+IP G +AS++ GV+ GR G  GSVDAV+SLGPEPGS GWRVH +EG++  R A+ SYRS+YGTI AGAS+  S +  +L LRGSITTM GG+FLSNWIDD FAVV  G+P V V  ENR AGVTDS GMLLIP+LR+YQ+NK+ ID
Sbjct:  314 VFHDFRTKRNTGVFAGLSIPFGDAASVTTGVSSGRSGTTGSVDAVKSLGPEPGSYGWRVHDSEGSSRYREATASYRSSYGTIQAGASQAGSGSVGSLELRGSITTMGGGVFLSNWIDDSFAVVATGVPDVEVLSENRRAGVTDSSGMLLIPTLRSYQRNKIAID 477          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A1H4VVU3_9BRAD (Outer membrane usher protein n=14 Tax=Bradyrhizobium TaxID=374 RepID=A0A1H4VVU3_9BRAD)

HSP 1 Score: 208 bits (529), Expect = 5.980e-60
Identity = 107/164 (65.24%), Postives = 130/164 (79.27%), Query Frame = 0
Query:    1 VFHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEID 164
            VFHDF  + N+G+FAGL++P G SASI+ GV+ GR G  GSVDAV+S+GPEPGS GWRVH +EG++  R A+ SYRS+YGTI AGAS+  S +  +L LRGSITTM GG+FLSNWIDD FAVV  G+P V V  ENR AGVT+S GMLLIP+LR+YQKNK+ ID
Sbjct:  530 VFHDFRAKRNTGMFAGLSVPFGDSASITTGVSSGRSGTTGSVDAVKSIGPEPGSYGWRVHDSEGSSRYREATASYRSSYGTIQAGASQAGSGSVGSLELRGSITTMGGGVFLSNWIDDSFAVVATGVPEVEVLSENRRAGVTNSSGMLLIPTLRSYQKNKIAID 693          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A537MRH2_9PROT (Fimbrial biogenesis outer membrane usher protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MRH2_9PROT)

HSP 1 Score: 163 bits (412), Expect = 1.490e-44
Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = 0
Query:    2 FHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEID 164
            F D G R N G   GL+I +G +A  S+GV++ R G   +VDAV+ LG +PGSVGWR+H +EGAA DR A+ +YRSNY  +  G  +    A A   + G++ TM  G+FL+N IDD FAV++ G+PGV V HENRP  +TDS G  L+PSL +YQKNK+ ID
Sbjct:  269 FTDIGDRKNCGFLVGLSIALGDAALASSGVSRDRNGTNVTVDAVKPLGQQPGSVGWRLHDSEGAAPDRSAAAAYRSNYARVEVGVRQKGRGAGATAEVEGAVATMGNGVFLANRIDDAFAVIDTGVPGVEVLHENRPVAITDSAGRALVPSLHSYQKNKIAID 431          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: UPI0012403844 (fimbria/pilus outer membrane usher protein n=1 Tax=Neisseria meningitidis TaxID=487 RepID=UPI0012403844)

HSP 1 Score: 145 bits (366), Expect = 6.820e-41
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0
Query:   56 GWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEID 164
            GWRVH +EG+A+ R A+ SYRS+YGT+ AGAS+  S A  +L LRGSITTM GG+FLSNWIDD FAVV  G+P V V +ENR AGVTDSRGMLLIP+LR+YQ NK+ ID
Sbjct:    1 GWRVHDSEGSASYREATASYRSSYGTVQAGASQAGSGAVGSLELRGSITTMGGGVFLSNWIDDSFAVVTTGVPDVEVLNENRRAGVTDSRGMLLIPALRSYQNNKIAID 109          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A3S2JI91_9HYPH (Fimbrial biogenesis outer membrane usher protein (Fragment) n=1 Tax=Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 TaxID=2496702 RepID=A0A3S2JI91_9HYPH)

HSP 1 Score: 146 bits (369), Expect = 1.930e-40
Identity = 76/166 (45.78%), Postives = 107/166 (64.46%), Query Frame = 0
Query:    2 FHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEIDAVS 167
            F + G R N+G+FAGL+IPIG     S  ++  RG      D  + LG EPGS+GWR    +G + +  A+VSYRS++G   A  + +NS  +A     G+I TM  G+FL++ IDD FAV+  GLP V V +ENRP+GVTD++G LL+P LR+YQ+NK+ ID  +
Sbjct:    8 FAELGGRRNAGLFAGLSIPIGGDTMASTAISAARGRFDVIADVSKPLGEEPGSLGWRASVTQGRSAEGSAAVSYRSSHGRADADVARSNSGTTATAQFDGAIATMGSGIFLTDRIDDSFAVIETGLPNVGVLYENRPSGVTDAKGRLLLPRLRSYQRNKIAIDTTN 173          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A6M7V0K5_9HYPH (Fimbrial biogenesis outer membrane usher protein n=2 Tax=Mesorhizobium sp. NZP2077 TaxID=2483404 RepID=A0A6M7V0K5_9HYPH)

HSP 1 Score: 151 bits (382), Expect = 1.810e-39
Identity = 78/166 (46.99%), Postives = 111/166 (66.87%), Query Frame = 0
Query:    2 FHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEIDAVS 167
            F + G R N+G+FAGL+IPIG  A  S+ V+  R G+    D  + LG EPGSVGWR   ++G +++  A++SYRS++G   A    ++S  +A     G+I TM  G+FL++ IDD FA+V  GLPGV V +ENRP GVTD++G LL+P LRAYQ+NK+ I+  +
Sbjct:  521 FAELGGRRNAGLFAGLSIPIGGDAMASSAVSADRHGVEAIADVSKPLGEEPGSVGWRTSLSQGRSSEGSAAISYRSSHGRADATVGRSSSGTTATAQFDGAIATMGSGIFLTDRIDDSFAIVETGLPGVGVLYENRPIGVTDAKGRLLVPGLRAYQRNKVAIETTN 686          
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Match: A0A1H1JW09_9HYPH (Outer membrane usher protein n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1JW09_9HYPH)

HSP 1 Score: 149 bits (377), Expect = 9.160e-39
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0
Query:    2 FHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGPEPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLRGSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLIPSLRAYQKNKMEID 164
            F D G + N+G F GL++PIG SA+ S  V+ G+ G     D  + LG EPGSVGWRV  ++G    + A+ SYRS YG   A     N  A+A   + G+I TM  G+FL++ IDD FAVV AG+P V V +ENRP GVTDS G LL+P LR+YQKNK+ ID
Sbjct:  547 FTDLGAKRNTGFFVGLSVPIGGSATASTSVSTGKDGTSVIEDVTKPLGLEPGSVGWRVTGSQGKPAVQSAAASYRSPYGWAEATIGHANHGATATAQVDGAIATMGTGVFLTSRIDDSFAVVEAGVPNVGVLYENRPIGVTDSNGRLLVPGLRSYQKNKIAID 709          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58571.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00143CE6045.170e-7976.05fimbria/pilus outer membrane usher protein n=1 Tax... [more]
UPI000699EEC35.930e-7777.11fimbria/pilus outer membrane usher protein n=2 Tax... [more]
A0A560LNK1_9BRAD1.940e-6367.68Outer membrane usher protein n=3 Tax=Bradyrhizobiu... [more]
A0A6P1BVT7_9BRAD9.300e-6366.46Fimbrial biogenesis outer membrane usher protein (... [more]
A0A1H4VVU3_9BRAD5.980e-6065.24Outer membrane usher protein n=14 Tax=Bradyrhizobi... [more]
A0A537MRH2_9PROT1.490e-4450.92Fimbrial biogenesis outer membrane usher protein n... [more]
UPI00124038446.820e-4167.89fimbria/pilus outer membrane usher protein n=1 Tax... [more]
A0A3S2JI91_9HYPH1.930e-4045.78Fimbrial biogenesis outer membrane usher protein (... [more]
A0A6M7V0K5_9HYPH1.810e-3946.99Fimbrial biogenesis outer membrane usher protein n... [more]
A0A1H1JW09_9HYPH9.160e-3950.31Outer membrane usher protein n=3 Tax=unclassified ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000015Outer membrane usher proteinPFAMPF00577Ushercoord: 62..165
e-value: 3.3E-14
score: 52.6
IPR000015Outer membrane usher proteinPANTHERPTHR30451OUTER MEMBRANE USHER PROTEINcoord: 17..166
IPR042186Outer membrane usher protein FimD, plug domainGENE3D2.60.40.2610Outer membrane usher protein FimD, plug domaincoord: 107..167
e-value: 6.2E-13
score: 50.5
NoneNo IPR availablePANTHERPTHR30451:SF5SLR0019 PROTEINcoord: 17..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58571contigP-wetherbeei_contig58571:2..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58571.1.1mRNA_P-wetherbeei_contig58571.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58571 2..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58571.1.1 ID=prot_P-wetherbeei_contig58571.1.1|Name=mRNA_P-wetherbeei_contig58571.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp
VFHDFGTRINSGVFAGLTIPIGPSASISAGVAQGRGGIVGSVDAVQSLGP
EPGSVGWRVHAAEGAATDRRASVSYRSNYGTIHAGASETNSAASAALNLR
GSITTMDGGLFLSNWIDDGFAVVNAGLPGVAVRHENRPAGVTDSRGMLLI
PSLRAYQKNKMEIDAVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000015Fimb_usher
IPR042186FimD_plug_dom