mRNA_P-wetherbeei_contig5856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5856.1.1
Unique NamemRNA_P-wetherbeei_contig5856.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A6H5JSS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS2_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 3.150e-74
Identity = 130/244 (53.28%), Postives = 161/244 (65.98%), Query Frame = 1
Query:   91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASD 822
            SGFDSMN++VA LLTDLTA  RFAGDLNVDLNEI TN+VPFPR+HYL++ +SPLP    A+                         ++PP      G  RR MA +F  A S    L+ ADPR +++LACGLL+RG+V  SD +A +ERL AELDMV WN EG+KIG+C VPP+G  +SLLCL+NNCC+   F  +  RF +LY R AMLHHYT+F+E   FDEA ESL  + ADYA L  AS+
Sbjct:  238 SGFDSMNSLVARLLTDLTASMRFAGDLNVDLNEITTNLVPFPRLHYLLSSVSPLPTRSSAEVFDGR--------------------TIPPAAAGFDGRPRR-MAQMFSGAFSASNMLMRADPRKSKFLACGLLVRGEVVVSDVNANIERLAAELDMVHWNPEGYKIGLCSVPPVGTTQSLLCLSNNCCIMDTFADLRRRFIQLYHREAMLHHYTEFMERGGFDEALESLESLIADYAELDKASE 460          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A835YXS9_9STRA (Tubulin/FtsZ family, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXS9_9STRA)

HSP 1 Score: 244 bits (622), Expect = 4.960e-73
Identity = 130/240 (54.17%), Postives = 155/240 (64.58%), Query Frame = 1
Query:   88 GSGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
            G GFD MN+IVA L+ D+TA ARF G LNVDLNEI TN+VPFPRMHYLV+ +SPL                              R SLP  P   P   R  M  L  DALS  RQL+  DP  +R+LAC LLLRGDV  S+A+  VE+LR  LDMV WNREGFK+G+C VPP G  RSLLCL+NNCCVA  F+ + ++F +LY RRAM+HHYTQFV+ +VFDEA ES+  + ADY  L
Sbjct:  255 GPGFDGMNSIVASLMADVTASARFPGSLNVDLNEIATNLVPFPRMHYLVSALSPL-------------------RVPPPPQQMARRASLP-APERGP---RGTMPRLIADALSPTRQLMRCDPARSRFLACSLLLRGDVTVSEANVGVEKLRGSLDMVHWNREGFKVGLCNVPPPGLQRSLLCLSNNCCVAQSFEDLRQQFCKLYTRRAMVHHYTQFVDQSVFDEALESVTALIADYEEL 471          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: H3G7Q3_PHYRM (Tubulin_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7Q3_PHYRM)

HSP 1 Score: 204 bits (519), Expect = 3.410e-60
Identity = 107/244 (43.85%), Postives = 153/244 (62.70%), Query Frame = 1
Query:   91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASD 822
            S F  MN IVA LLT+LT+  RF G LNVDLNEI TN+VPFP++H+L++ +SP+     +D                              PR+ P    RR+  +F DA  +  QL+ A+PR + YLACGLL+RG+VE SD +A ++RL++E+ M+ WN+EGFK+GVC VPP+G+  SLLCL+NNCC+   F+ +  RF +LY R+A +HHYT+F++  + D A E+   +  +YA L  +SD
Sbjct:   62 SAFGEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPV--FATSD------------------------------PRQQP----RRLNQMFSDAFQKDHQLIRANPRASVYLACGLLMRGNVEVSDINANIQRLQSEVRMIHWNQEGFKVGVCSVPPVGQKSSLLCLSNNCCIRETFERLNARFHKLYSRKAHMHHYTEFMDAGMLDMAQENTRYLIGEYAKLERSSD 269          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A6A3XDD2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XDD2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.500e-60
Identity = 111/247 (44.94%), Postives = 156/247 (63.16%), Query Frame = 1
Query:   85 RGSGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASDA 825
            + S F  MN IVA LLT+LT+  RF G LNVDLNEI TN+VPFP++H+L++ +SP+     AD                              PR+ P    RR+  +F +A  +  QL+ A+PR + YLACGLL+RG+VE SD +A ++RL++E+ M+ WN+EGFK+GVC VPP+G   SLLCL+NNCC+   F+ +  RF +LY R+A +HHYT+F++  + DEA E+   +  +YA L GASDA
Sbjct:  289 KASAFGEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPV--FATAD------------------------------PRQQP----RRLNQMFSEAFQQDHQLIRANPRASVYLACGLLMRGNVEVSDINANIQRLQSEVRMIHWNQEGFKVGVCSVPPVGHKSSLLCLSNNCCIRETFERLHTRFHKLYSRKAHMHHYTEFMDVGMLDEAQENARYLIGEYAKLEGASDA 499          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A061QL12_9CHLO (Tubulin epsilon chain (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QL12_9CHLO)

HSP 1 Score: 203 bits (516), Expect = 5.730e-59
Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 1
Query:   97 FDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAAR---RRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
            FD+MN I A LL  +T+  RF G LNVDLNEI  N+VP+PRMH+L+  +SP                                      PR+  G AR   R +   F    SR  QLL A+PR + YLACG+L RGDV  SD    + R++  L MVPWN EGFKIG+CGVPP   P S+ CL+NNCCV G F  M ERF +LY+R+  +HHYT+++E AVFD+A E +  +  DYA L
Sbjct:  116 FDAMNGIAANLLLGVTSSVRFEGSLNVDLNEITNNLVPYPRMHFLLPSMSPFAT-----------------------------------PRDV-GMARAGSRALETSFSQCFSREHQLLRAEPRRSTYLACGMLFRGDVTMSDVQRNMARIKPSLRMVPWNTEGFKIGLCGVPPADAPLSVTCLSNNCCVRGTFTSMQERFMKLYKRKVYVHHYTRYMEAAVFDQALEDVHSLIEDYAGL 319          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A0P1A9E1_PLAHL (Tubulin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9E1_PLAHL)

HSP 1 Score: 208 bits (529), Expect = 5.810e-59
Identity = 107/245 (43.67%), Postives = 153/245 (62.45%), Query Frame = 1
Query:   91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASDA 825
            S F+ MN +VA LLT+LT+  RF G LNVDLN+I TN+VPFP++H+L+A +SP  D                                   PR+ P    RR+  +F DA  +  QL+ A+PR + YLACGL +RG VE SD +A ++RL++EL M+ WN+EGFK+G+C VPP+G+  SLLCL+NNCC+   F  +  RF +LY RRA +HHYT++++ A  DEA E+++ +  +Y+ L  AS+A
Sbjct:  296 SAFEEMNNVVARLLTNLTSSMRFPGSLNVDLNDITTNLVPFPKLHFLLASMSPAFDTSD--------------------------------PRQQP----RRLFQMFSDAFQKDHQLIRANPRASVYLACGLFMRGGVEISDINANIQRLQSELRMIHWNQEGFKVGICRVPPVGQKSSLLCLSNNCCIRETFQRLNTRFQKLYSRRAHVHHYTEYMDIAKLDEAQENVMYLIGEYSKLEHASEA 504          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A5D6XJK8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJK8_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.150e-58
Identity = 110/239 (46.03%), Postives = 151/239 (63.18%), Query Frame = 1
Query:   91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
            S F  MN IVA LLT+LT+  RF G LNVDLNEI TN+VPFP++H+L++ +SPL     AD                              PR  P    RR+A +F DA  +  QL+ A+PR + YLACGLLLRG+VE SD +A ++RL++ + M+ WN+EGFK+G+C VPP+G+ +SLLCL+NNCC+   F+ +  RF +LY R+A +HHY +F+E A F EA ES+  +  +YA L
Sbjct:  328 SAFGEMNNIVARLLTNLTSSVRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPLVST--AD------------------------------PRHQP----RRLAQMFTDAFHKDHQLIRANPRASVYLACGLLLRGNVEVSDVNANIQRLQSGVRMIHWNQEGFKVGMCSVPPIGQRQSLLCLSNNCCIRETFERLQRRFQKLYARKAHVHHYAEFMESARFGEALESVRYLVEEYAKL 530          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A7S1X922_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X922_9CHLO)

HSP 1 Score: 202 bits (514), Expect = 5.320e-58
Identity = 105/239 (43.93%), Postives = 136/239 (56.90%), Query Frame = 1
Query:   97 FDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAAR--RRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
            FD+MN + A LL  +T+  RF G LNVDLNEI  N+VP+P+MH+L+  +SP                                      PR+   A    R +        SR  QLL ADPR++ YLACG+L RG V  SD    + R++  L MVPWN EGFKIG+C VPP+  P SL CL+NNCCV   F  M ERF +LY+R+  +HHYTQF+E A+FDEAY+S+ ++  DYA L
Sbjct:  172 FDAMNGVAASLLLGVTSSVRFEGSLNVDLNEITNNLVPYPKMHFLIPSLSPYAT-----------------------------------PRDVAFATAGPRALETTCSQVFSREHQLLRADPRNSTYLACGMLFRGAVTISDVQRNLARIKPTLRMVPWNPEGFKIGLCSVPPVNSPLSLTCLSNNCCVRSTFSNMQERFQKLYKRKVYVHHYTQFMEEAIFDEAYQSVEQLVCDYANL 375          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A225WH07_9STRA (Tubulin/FtsZ family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WH07_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.160e-57
Identity = 109/243 (44.86%), Postives = 152/243 (62.55%), Query Frame = 1
Query:   91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGAS 819
            S F+ MN IVA LLT+LT+  RF G LNVDLNEI TN+VPFPR+H+L++ +SPL    GA                               PR+ P    RR+  +F DA  +  QL+ A+PR + YLACGLL+RG+VE SD +  ++RL++E+ M+ WN+EGFK+GVC VPP+G+  SLLCL+NN C+   F+ +  RF +LY R+A +HHYT+F++  + DEA E+   +  +YA L  AS
Sbjct:  264 SAFEEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPRLHFLLSSMSPL----GATSD----------------------------PRQQP----RRLNQIFADAFHKDYQLIRANPRASVYLACGLLMRGNVEVSDINVNIQRLQSEVRMIHWNQEGFKVGVCSVPPVGQKSSLLCLSNNSCIRETFERLNTRFHKLYSRKAHMHHYTEFMDAGMLDEAQENARYLIGEYAKLERAS 470          
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A061RE11_9CHLO (Tubulin epsilon n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RE11_9CHLO)

HSP 1 Score: 203 bits (516), Expect = 1.640e-57
Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 1
Query:   97 FDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAAR---RRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
            FD+MN I A LL  +T+  RF G LNVDLNEI  N+VP+PRMH+L+  +SP                                      PR+  G AR   R +   F    SR  QLL A+PR + YLACG+L RGDV  SD    + R++  L MVPWN EGFKIG+CGVPP   P S+ CL+NNCCV G F  M ERF +LY+R+  +HHYT+++E AVFD+A E +  +  DYA L
Sbjct:  249 FDAMNGIAANLLLGVTSSVRFEGSLNVDLNEITNNLVPYPRMHFLLPSMSPFAT-----------------------------------PRDV-GMARAGSRALETSFSQCFSREHQLLRAEPRRSTYLACGMLFRGDVTMSDVQRNMARIKPSLRMVPWNTEGFKIGLCGVPPADAPLSVTCLSNNCCVRGTFTSMQERFMKLYKRKVYVHHYTRYMEAAVFDQALEDVHSLIEDYAGL 452          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSS2_9PHAE3.150e-7453.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXS9_9STRA4.960e-7354.17Tubulin/FtsZ family, GTPase domain-containing prot... [more]
H3G7Q3_PHYRM3.410e-6043.85Tubulin_C domain-containing protein n=1 Tax=Phytop... [more]
A0A6A3XDD2_9STRA3.500e-6044.94Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A061QL12_9CHLO5.730e-5945.00Tubulin epsilon chain (Fragment) n=2 Tax=Tetraselm... [more]
A0A0P1A9E1_PLAHL5.810e-5943.67Tubulin family n=1 Tax=Plasmopara halstedii TaxID=... [more]
A0A5D6XJK8_9STRA1.150e-5846.03Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1X922_9CHLO5.320e-5843.93Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A225WH07_9STRA1.160e-5744.86Tubulin/FtsZ family protein n=1 Tax=Phytophthora m... [more]
A0A061RE11_9CHLO1.640e-5745.00Tubulin epsilon n=1 Tax=Tetraselmis sp. GSL018 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5856contigP-wetherbeei_contig5856:2471..3562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo118214
PFAMsTubulin,Tubulin_C
Model size1092
Max annot lvl4776|Peronosporales
KEGG koko:K10391
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.24e-61
EggNOG OGsCOG5023@1|root,KOG1375@2759|Eukaryota,3Q98D@4776|Peronosporales
DescriptionTubulin/FtsZ family, GTPase domain
Cds size831
COG categoryZ
BRITEko00000,ko03036,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186866.772248-UTR-P-wetherbeei_contig5856:2470..26261683186866.772248-UTR-P-wetherbeei_contig5856:2470..2626Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5856 2471..2626 -
1683186866.8025768-UTR-P-wetherbeei_contig5856:3457..35621683186866.8025768-UTR-P-wetherbeei_contig5856:3457..3562Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5856 3458..3562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186866.7891695-CDS-P-wetherbeei_contig5856:2626..34571683186866.7891695-CDS-P-wetherbeei_contig5856:2626..3457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5856 2627..3457 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5856.1.1prot_P-wetherbeei_contig5856.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5856 2627..3457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5856.1.1

>prot_P-wetherbeei_contig5856.1.1 ID=prot_P-wetherbeei_contig5856.1.1|Name=mRNA_P-wetherbeei_contig5856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp
MNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLP
DEGGADGGGGGCDAGGGTRGGGGGGGGGRRGSLPPLPREAPGAARRRMAH
LFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELD
MVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYR
RRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASDAGGGGFGGSGI
GDGGFGGSGGGSFDMAAAPTRRRPAF*
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mRNA from alignment at P-wetherbeei_contig5856:2471..3562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5856.1.1 ID=mRNA_P-wetherbeei_contig5856.1.1|Name=mRNA_P-wetherbeei_contig5856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig5856:2471..3562- (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCAGCAGACTCGGCGTCGGCGGTGGCGGCGGGGGTGGTGGTAGCGG GGGTGGGAGCGGAAAGGCGGGGAAGGCCGGCGGTCGCGGAAGCGGTTTCG ACAGCATGAATGCCATCGTCGCCGGATTGCTGACCGATCTGACGGCGCCG GCGCGCTTCGCGGGCGACCTTAACGTCGATCTGAACGAGATTTGCACCAA CATGGTGCCGTTTCCCCGGATGCACTATTTGGTCGCCGGTATCAGCCCAC TCCCGGACGAGGGAGGCGCGGACGGCGGCGGCGGCGGCTGCGACGCTGGT GGTGGCACCCGCGGCGGTGGCGGTGGCGGTGGCGGCGGAAGGAGAGGATC GCTGCCGCCGCTGCCGCGCGAGGCGCCGGGTGCGGCACGACGGCGCATGG CGCACCTCTTCGGCGACGCGCTCTCGCGGCGGCGGCAGCTGCTGTCGGCG GACCCGCGGCACGCGCGTTACCTGGCGTGCGGCCTGCTTCTGCGCGGCGA CGTCGAGGCTTCGGATGCACACGCCGCCGTCGAACGGCTCCGCGCTGAAC TCGACATGGTTCCGTGGAACCGGGAAGGGTTCAAGATCGGCGTGTGCGGG GTACCGCCGCTGGGGCGGCCGCGCAGCCTGCTGTGCCTCGCTAACAACTG CTGCGTTGCTGGGCGCTTCGACGGCATGGCCGAAAGGTTCGCGCGGCTGT ACCGGCGGCGTGCCATGCTGCACCACTACACGCAGTTCGTCGAGCCCGCC GTCTTCGACGAGGCGTACGAGAGCCTTCTGCGCGTCGCCGCCGACTACGC CGCGCTCGGCGGGGCGTCGGACGCCGGTGGCGGGGGTTTCGGTGGCAGCG GCATTGGCGATGGCGGTTTCGGCGGCAGCGGCGGCGGTAGCTTCGATATG GCAGCGGCGCCGACGCGGCGGCGGCCGGCCTTCTGAAAAATTGGATCAAA CGCATATTATCCTAGGAGGGGTTTACATCACAGGGCAGCTATGAGGTAAG AGGGACAGACACATCACTTTTCTCAGGCAACGTCCAGGAACGACGAAAGC ATCTCATCGAGCGCGTTTCAACTAAAAAAGAAGCAACGGTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5856:2471..3562-

>mRNA_P-wetherbeei_contig5856.1.1 ID=mRNA_P-wetherbeei_contig5856.1.1|Name=mRNA_P-wetherbeei_contig5856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig5856:2471..3562- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATGCCATCGTCGCCGGATTGCTGACCGATCTGACGGCGCCGGCGCG
CTTCGCGGGCGACCTTAACGTCGATCTGAACGAGATTTGCACCAACATGG
TGCCGTTTCCCCGGATGCACTATTTGGTCGCCGGTATCAGCCCACTCCCG
GACGAGGGAGGCGCGGACGGCGGCGGCGGCGGCTGCGACGCTGGTGGTGG
CACCCGCGGCGGTGGCGGTGGCGGTGGCGGCGGAAGGAGAGGATCGCTGC
CGCCGCTGCCGCGCGAGGCGCCGGGTGCGGCACGACGGCGCATGGCGCAC
CTCTTCGGCGACGCGCTCTCGCGGCGGCGGCAGCTGCTGTCGGCGGACCC
GCGGCACGCGCGTTACCTGGCGTGCGGCCTGCTTCTGCGCGGCGACGTCG
AGGCTTCGGATGCACACGCCGCCGTCGAACGGCTCCGCGCTGAACTCGAC
ATGGTTCCGTGGAACCGGGAAGGGTTCAAGATCGGCGTGTGCGGGGTACC
GCCGCTGGGGCGGCCGCGCAGCCTGCTGTGCCTCGCTAACAACTGCTGCG
TTGCTGGGCGCTTCGACGGCATGGCCGAAAGGTTCGCGCGGCTGTACCGG
CGGCGTGCCATGCTGCACCACTACACGCAGTTCGTCGAGCCCGCCGTCTT
CGACGAGGCGTACGAGAGCCTTCTGCGCGTCGCCGCCGACTACGCCGCGC
TCGGCGGGGCGTCGGACGCCGGTGGCGGGGGTTTCGGTGGCAGCGGCATT
GGCGATGGCGGTTTCGGCGGCAGCGGCGGCGGTAGCTTCGATATGGCAGC
GGCGCCGACGCGGCGGCGGCCGGCCTTCTGA
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