mRNA_P-wetherbeei_contig5854.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: D7G0Y1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y1_ECTSI) HSP 1 Score: 145 bits (367), Expect = 5.470e-35 Identity = 82/204 (40.20%), Postives = 118/204 (57.84%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALA---LFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRTVELVFTHTGAGARDAISIEPLCLYLQSDPVAASWLGHFDD 949
MGQK+G+A + NLP ++ A W++F+L + GWG+ F LC +A ++G +A+ +A F +DTD N+LVDGLEL+S +G LS MP DK+ F+ C+D+GG LS +EL LLL++T AGLCKL G P SA ++ LVF H G +S++ L Y ++PVA+SWL +DD
Sbjct: 1 MGQKVGKASFGDVVKPFVNLPDESIRALWQEFNLCATGWGVSPKFFNQLCQAMAKSIGT------------EANEVANKEFFAALDTDKNNLVDGLELMSTLGMLSGMPREDKVEFVFSCYDVGGRSTLSMNELFLLLKSTSAGLCKL--SGIDAPDSARLESIASLVFMHNKTGVEGGLSLDTLSSYCDANPVASSWLAFYDD 190
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A7S3JT59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT59_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.460e-24 Identity = 75/213 (35.21%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALA--LFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKL-YDGGAAPPASAAIDRTV--ELVFTHTGAGARDAI----SIEPLCLYLQSDPVAASWLGHFDDVSD 958
MGQK+G+ + S+ N+ +E+ W F+ +DG+G++L Q +C GQ ++ V L LF +DTD N L+D LE+L + S M KL FL RCFD G RLS DE+ L LR +L G+CKL G A PP ++ L + T ++I +I L YL DP A +WL FDDV++
Sbjct: 14 MGQKVGKVAYEPNLESFINISTGGIESIWEAFNDVADGFGINLGETQLIC---------GQLANELQLDVQALEKLVETLFKRLDTDENGLIDALEMLCGLAVASGMSSGQKLSFLLRCFDFDGTSRLSVDEVTLALRCSLVGVCKLAIVGEAIPPTEDELEIIAIRALAYCQTEKTTTESIQSRAAISELVQYLLIDPEAVTWLDFFDDVAE 217
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A6H5L3H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H7_9PHAE) HSP 1 Score: 105 bits (261), Expect = 5.530e-23 Identity = 70/212 (33.02%), Postives = 107/212 (50.47%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALALFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASA-AIDRTVELVFTHTGAGARDA-------ISIEPLCLYLQSDPVAASWLGHFDDVSD 958
MGQ+ G+A + A + NL AAV W F+ +DG+G++L F +C+ + L +A D + ALF L+DTDNN L+D +E +SA+ S M D L F+ C+D G GRL+ DE+ L ++T+ G+CKL GA A A R ++ A R A + + + + + P SWL +FDD ++
Sbjct: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKVK-----LSTALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLSCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGVDAGLKACPRDIDFEAAAMNAFERRAEGSDRFKVKMREVIDFCEEQPEIRSWLDYFDDPAE 207
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 107 bits (268), Expect = 5.420e-22 Identity = 72/212 (33.96%), Postives = 107/212 (50.47%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALALFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASA-AIDRTVELVFTHTGAGARDA-------ISIEPLCLYLQSDPVAASWLGHFDDVSD 958
MGQ+ G+A + A + NL AAV W F+ +DG+G++L F +C+ + L +A D + ALF L+DTDNN L+D +E +SA+ S M D L F+ C+D G GRL+ DE+ L ++T+ G+CKL GA A A R V+ A R A + + + + Q P SWL +FDD ++
Sbjct: 1 MGQRHGKAVYDSAAKPFLNLSLAAVGTLWETFNDVADGFGINLHEFLEICSELGEELQLNRAKLDKL-------STALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKACPRDVDFEAAAMNAFERRAEGSDRFKVKMREVIDFCQEQPEIRSWLDYFDDPAE 205
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A7S3ZZI0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZI0_9STRA) HSP 1 Score: 107 bits (267), Expect = 7.290e-22 Identity = 71/209 (33.97%), Postives = 105/209 (50.24%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALALFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRT---VELVFTHTGAGARDA---ISIEPLCLYLQSDPVAASWLGHFDDVS 955
MGQ +G+ ++ ADA + NL VE W + L+SDG+ LD QH+ +I D +A ALF +DTD NDL+D LE L+ + + S M KL F+ +D G L DE+ LLL++T+ GLCK+ +G + P D ++L + G RD IS Y ++P +SWL H+DD++
Sbjct: 1 MGQVIGKGRIHADAIPFINLEPDRVEKLWSHYKLHSDGFALDPDALQHVLKII---YEDDEAFEQ--------KCRALFAKLDTDRNDLIDALECLATLASASGMKPQRKLTFVFDLYDFSESGELLLDEVTLLLKSTVTGLCKISEGESIPSLKEFEDLARLALKLEPSKDGKAVRDVTSTISRAQFVAYAVANPTISSWLNHYDDLT 198
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: F0YDV7_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDV7_AURAN) HSP 1 Score: 105 bits (263), Expect = 2.350e-21 Identity = 71/215 (33.02%), Postives = 105/215 (48.84%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALG-DGQAGPDVAAGVGDASALALFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRTVEL------------VFTHTGAGARDAISIEPLCLYLQSDPVAASWLGHFDDV 952
MGQK+G+ + A + +LP +AV+ WR F+LN++GWGL+ A F + + L D A D+ LF + DTD NDL+D LE L+ I A+S M K+ F+ +D G L DE+ LL+++T+ GL K+ PP+ + +L V +T IS Y S+P +SWL H+DDV
Sbjct: 1 MGQKMGKGHVVEAAEPFLSLPQSAVDELWRSFNLNTEGWGLNPAQFTRMLGALTQTLQLDDDAARDLYG--------KLFEVFDTDKNDLIDALEFLATIAAISGMDANKKMMFVFNLYDFSENGELMLDEVTLLMKSTVVGLSKISLD--TPPSLKEFEALAKLALGCELSVDGKPVLENTAT-----ISRTKFVTYCDSNPTMSSWLAHYDDV 200
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A7S1U2E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2E9_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.570e-21 Identity = 70/204 (34.31%), Postives = 102/204 (50.00%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALALFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRTVELVFT--HTGAGARDAISIEPLCLYLQSDPVAASWLGHFDDV 952
MGQ G+AKL+ S N+ A ++A + F SDGWGLD F +C + L V LF L+DTD N VDGLE L+A+G LS M KL F+ FD G G+++ DEL L+++++L+G+CK G PP+ +D F A + IS++ + + P +SW+ +FD V
Sbjct: 1 MGQLQGKAKLALS--SVPNIAADTLQAVLKQFQTYSDGWGLDEETFTLVCEPLQKELNCDDF-------VFSGRIKGLFRLLDTDTNGFVDGLEFLAALGLLSGMDVPSKLVFVFSIFDFDGSGKVTEDELVLMVQSSLSGICK--QAGLDPPSLEDVDAICLKAFQALERDPAAGERISLKEFQEFSTTSPSISSWVDYFDGV 193
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.160e-19 Identity = 77/211 (36.49%), Postives = 104/211 (49.29%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGD--GQAGPDVAAGVGDASALALFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRTVELVFTHTGAGARD----AISIEPLCLYLQSDPVAASWLGHFDDVSDT 961
MGQ LGRA L A Y N+P+A+V W F+ ++G GL C ++ L D G A + DA + +LF +D D N+L+D LE L+A+GALS M K+ F+ FD G L+ DE L LR+TL+GLCKL G PP + +E V AG RD IS Y P SW+ + D+ +T
Sbjct: 1 MGQVLGRAPLLPVARHYVNVPSASVHHLWDAFNDIAEGMGLTS---DETCEILRVCLKDVLGYAEKKL-----DALSRSLFVALDDDQNELIDALEFLAALGALSGMSQEQKITFIFGIFDFDESGVLTVDETILALRSTLSGLCKL-SGLELPP-----ETEIERVAVGAFAGVRDIEGSTISKIDFATYCTITPEITSWIDFYGDICET 197
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A5A8CQ31_CAFRO (EF-hand domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQ31_CAFRO) HSP 1 Score: 98.6 bits (244), Expect = 7.420e-19 Identity = 74/208 (35.58%), Postives = 107/208 (51.44%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALA--LFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRTVELVF-------THTGAGARDA-ISIEPLCLYLQSDPVAASWLGH 940
MGQ+LGRA L +A +ANLP A+ A W F ++G+G+ G + C ++ P +A G + L+ LF +DTD+N L+D +ELLS + ++S+M A ++ F+AR FD G L DE L RT GLCKL PP+ A +D T+ +F + +G R A IS L + + P SWL H
Sbjct: 1 MGQRLGRAHLVPEAQPFANLPVDAIWAVWDAFHSVAEGFGI---GEEETCEILTCLQ------PALALTRGRLARLSRGLFRRLDTDDNGLIDSMELLSCLASISSMGLAQRIDFVARVFDFDETGALGFDEALLAARTLAHGLCKLTL--TRPPSDAPVDTTIAALFNGLPRQESSSGPNLRKASISRSQLVRAVIAHPATRSWLQH 197
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Match: A0A5A8E5W0_CAFRO (EF-hand domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E5W0_CAFRO) HSP 1 Score: 97.8 bits (242), Expect = 1.310e-18 Identity = 74/208 (35.58%), Postives = 106/208 (50.96%), Query Frame = 2
Query: 347 MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCAVIAAALGDGQAGPDVAAGVGDASALA--LFHLMDTDNNDLVDGLELLSAIGALSTMPGADKLRFLARCFDLGGGGRLSRDELCLLLRTTLAGLCKLYDGGAAPPASAAIDRTVELVF-------THTGAGARDA-ISIEPLCLYLQSDPVAASWLGH 940
MGQ+LGRA L +A +ANLP A+ A W F ++G+G+ G + C ++ P +A G + L+ LF +DTD+N L+D +ELLS + ++S+M A ++ F+AR FD G L DE L RT GLCKL PP+ A +D T+ +F + +G R A IS L + P SWL H
Sbjct: 1 MGQRLGRAHLVPEAQPFANLPVDAIWAVWDAFHSVAEGFGI---GEEETCEILTCLQ------PALALTRGRLARLSRGLFRRLDTDDNGLIDSMELLSCLASISSMGLAQRIDFVARVFDFDETGALGFDEALLAARTLAHGLCKLTL--TRPPSDAPVDTTIAALFNGLPRQESSSGPNLRKASISRSQLVRAAIAHPATRSWLQH 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5854.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5854.1.1 >prot_P-wetherbeei_contig5854.1.1 ID=prot_P-wetherbeei_contig5854.1.1|Name=mRNA_P-wetherbeei_contig5854.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp MGQKLGRAKLSADAASYANLPAAAVEAAWRDFSLNSDGWGLDLAGFQHLCback to top mRNA from alignment at P-wetherbeei_contig5854:763..2227- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5854.1.1 ID=mRNA_P-wetherbeei_contig5854.1.1|Name=mRNA_P-wetherbeei_contig5854.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1465bp|location=Sequence derived from alignment at P-wetherbeei_contig5854:763..2227- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5854:763..2227- >mRNA_P-wetherbeei_contig5854.1.1 ID=mRNA_P-wetherbeei_contig5854.1.1|Name=mRNA_P-wetherbeei_contig5854.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig5854:763..2227- (Phaeothamnion wetherbeei SAG_119_79)back to top |