mRNA_P-wetherbeei_contig58528.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A7Y5CWZ1_HYPSQ (DUF3108 domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CWZ1_HYPSQ) HSP 1 Score: 149 bits (377), Expect = 1.300e-41 Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGK-YQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
KLH G E+ ++ F S +DGK Y G +++S G +K+ G SG++ P++Y ++K SK G V LGF D V+ VA+ P P PD VP+K HL+GVFDP+SS+L ++H GGNPC+R I +F+GK RF++V++ E+L E KPSGQPT +VC+
Sbjct: 45 KLHFGGFEVGSYKFQSK-SDGKSYATTGSAEVSALFGAFKWKGGIESSGTLEPKAPRPAAYQLNFKTKSKIGSVTLGFDRDAVKTVALVPSKPPHPDAVPVKPEHLKGVFDPMSSILAMTHAGGGNPCERTIPIFDGKVRFNLVMSAKGEERLKEDKPSGQPTLLKVCK 212
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A2S5MAF0_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MAF0_HYPSQ) HSP 1 Score: 139 bits (349), Expect = 1.780e-37 Identity = 66/168 (39.29%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
KL GL++ ++ F S Y +K+S G +K+ G+ +G + P++Y ++K K G V+LGF + GV VA+ P P D VP+ HL+ VFDP+S+++ +SH +G NPC +RI +F+GK RFD+V++P TEK+++K PSGQP VCR
Sbjct: 40 KLSFNGLDVGSYDFESQFDGKSYVSNSSAKVSAVFGAFKWRGDIQSNGKFIANKPRPANYEMNFKTKKKGGSVKLGFDSSGVSSVALEPNKPPRKDAVPIAADHLKNVFDPMSAIMAMSHAVGPNPCKQRIPIFDGKARFDLVMSPKGTEKISDKSPSGQPRELIVCR 207
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A2P5KSJ5_HYPSQ (Uncharacterized protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2P5KSJ5_HYPSQ) HSP 1 Score: 138 bits (347), Expect = 4.000e-37 Identity = 73/175 (41.71%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNS-----KHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGG--NPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
K++ GL+I +F F S V+ Y L G +K+ MG +++ G T +G++S G PS+Y +D+ ++ K G V++ F GV + + P P PD+VPL AH + V DPLS+++ +S LGG NPC+R+I +F+GKQRFD++L+P R ++AE +PSGQP+ G VCR
Sbjct: 41 KINFGGLDIGSFRFQSKVSGNTYALTGDAKVRAVMGAFEWKGTTTSAGTVS-IGPKPSNYNFDFNSSAIIGKDKTGTVKMDFKDGGVASLVVVPSKPPPPDMVPLTVAHRQNVLDPLSAVMAMS--LGGTHNPCNRKISIFDGKQRFDLMLSPRRQVRIAEARPSGQPSVGFVCR 212
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A2W4RQZ0_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RQZ0_9PROT) HSP 1 Score: 135 bits (340), Expect = 4.650e-36 Identity = 65/167 (38.92%), Postives = 100/167 (59.88%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVC 501
K++ G+EI +F F S KY LAG +K+S +G+ K++G G+++ PS Y + +K +S G V + F V + + PP P+ VPL + HL+ VFDP+S++L ++ NPC+R++ VF+GKQRFD+VLT R E + E +PSG+P VC
Sbjct: 47 KIYFNGIEIGSFQFESNSDSAKYSLAGRAKLSALLGILKWSGALRSEGTLARGEPLPSDYFFRYKSSSDSGSVTMSFDKRRVAETKLEPPPSPSKSRVPLTEEHLKDVFDPMSAVLAMTTGGLDNPCERKVAVFDGKQRFDIVLTFRRKESIKEAQPSGEPAVAFVC 213
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A6N6SVE2_9HYPH (DUF3108 domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SVE2_9HYPH) HSP 1 Score: 129 bits (325), Expect = 8.360e-34 Identity = 59/163 (36.20%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 16 GLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
G + TF F S Y L G++++S +G + + G G I P+++ +D+K ++K G ++GF V ++ PP D +P+++ HL+GV DPLS+++ +S G NPCDRR+ VF+GK+RFD++L+ K+ E++PSGQP VCR
Sbjct: 54 GFNVGTFEFQSQAEQQSYTLVGNARLSILLGAFTWDGETRSFGLIVNQAPKPAAFSFDFKSSTKTGSTKIGFSDGAVTEIQHLPPPVAKSDTIPVREQHLKGVLDPLSAIMAISRANGANPCDRRVPVFDGKERFDLLLSYKSEMKVTEQQPSGQPGVAYVCR 216
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A537S949_9PROT (DUF3108 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S949_9PROT) HSP 1 Score: 128 bits (322), Expect = 2.230e-33 Identity = 57/168 (33.93%), Postives = 98/168 (58.33%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
+++ G + +F F S Y L G++ +S +G + + G+ G I P+S+ +D+K N + G ++GF D V + PP + ++PL++ HL+GV DPLS++++LS + +PCDRRI +F+GK+RFD++ + ++ E+ PSGQP VCR
Sbjct: 47 EINFNGFTVGSFEFQSQAESQSYTLTGNAHLSVLLGAFSWAGSTRSFGMIVNQAPKPASFSFDFKSNLRAGSTKIGFSDDAVTNIMNVPPMVTSAPIIPLREHHLKGVVDPLSAIMMLSRNTAADPCDRRIAIFDGKERFDLLFSRKGQMRVTEQAPSGQPGVAHVCR 214
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A7C2M1J1_9HYPH (DUF3108 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M1J1_9HYPH) HSP 1 Score: 127 bits (320), Expect = 4.230e-33 Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 16 GLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
G + TF F S Y L ++K+S +G + + G G I P+S+ +D++ N + G +LGF V + PP PA D +PL+ HL+GV DPL++++VLS NPCDRRI +F+GK+RFD++ + K+ E+ PSGQP VCR
Sbjct: 49 GFNVGTFEFQSQAERESYTLLANAKLSVLLGAFTWNGETRSFGLIVNQKPKPASFSFDFRSNLRAGSTKLGFADGIVTDIVHLPPPPPAADTIPLRQQHLQGVIDPLTAIMVLSRGASANPCDRRIPIFDGKERFDLLFSYKGEMKVTEQLPSGQPDIAHVCR 211
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A833D368_9HYPH (DUF3108 domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833D368_9HYPH) HSP 1 Score: 127 bits (318), Expect = 7.660e-33 Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGG-----NPCDRRIGVFEGKQRFDVVLTPHRTEKLAE 462
+++ GL++ TF FNS V D YQL G++ +S G Y++ G SG G P+SY + +K NSK G V + F V K+ PP + VPLK+AHL+GV DPLS++L L+ G NPC RR+G+F+GKQRFD+ L+ R + E
Sbjct: 39 RINFNGLDLGTFDFNSRVKDNSYQLTGNANVSALFGAYEWKGLSRASGLALQAGPQPASYYFAFKSNSKAGNVHMTFADTSVAKIVADPPIRSSVAAVPLKEAHLKGVVDPLSAVLALAKPASGRTTGINPCARRVGIFDGKQRFDIALSFKRQASITE 197
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: D8JW78_HYPDA (Uncharacterized protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=D8JW78_HYPDA) HSP 1 Score: 124 bits (312), Expect = 7.300e-32 Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 1 KLHMLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSHHLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
KL G E+ ++F S + Y G +++S G +K+TG FTGSGS+ G P +Y +K K V LGF GV+ +A+ P P P+ + + +L+ VFDP+S+ L +S+ G + C+R I +F+GK RFD+ L+ E + E++PSGQP +CR
Sbjct: 50 KLTFNGFEVGAYNFTSKYSGETYSATGKTEISALFGAFKWTGTFTGSGSVDKSGPRPVAYQMSYKTKKKLTSVTLGFDPAGVKTIALVPNKPPNPETIKVTPDNLKHVFDPISATLAISNATGSDACNRTIPIFDGKARFDLRLSLKGREAIKEQRPSGQPKELLICR 217
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Match: A0A2D7FAA5_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FAA5_9HYPH) HSP 1 Score: 124 bits (311), Expect = 8.420e-32 Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 16 GLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDGVAPSSYVYDWKVNSKHGGVRLGFGADGVEKVAIAPPHEPAPDVVPLKDAHLRGVFDPLSSLLVLSH-HLGGNPCDRRIGVFEGKQRFDVVLTPHRTEKLAEKKPSGQPTAGQVCR 504
G I +F+F S V Y LAG +K+S G +K+ G SG +G P +Y +D++ NSK G VR+ F + + P + VPL+ HLR V DP+S+++ L+ G +PC RRI +F+GKQRFD+VL+P E++ E++PSGQP VCR
Sbjct: 45 GFRIGSFNFRSDVGGKTYSLAGEAKVSAVFGAFKWRGFTRSSGHAVQNGPLPKNYAFDFQSNSKRGSVRMAFQKKRIIMSEVIPSKPHSNQHVPLQAEHLRNVVDPISAVMALTKVRPGKHPCRRRIPIFDGKQRFDLVLSPAGREQIRERRPSGQPDMAFVCR 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58528.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58528.1.1 >prot_P-wetherbeei_contig58528.1.1 ID=prot_P-wetherbeei_contig58528.1.1|Name=mRNA_P-wetherbeei_contig58528.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp MLGLEIATFHFNSTVTDGKYQLAGHSKMSWAMGLYKYTGNFTGSGSISGDback to top mRNA from alignment at P-wetherbeei_contig58528:1..504+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58528.1.1 ID=mRNA_P-wetherbeei_contig58528.1.1|Name=mRNA_P-wetherbeei_contig58528.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig58528:1..504+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58528:1..504+ >mRNA_P-wetherbeei_contig58528.1.1 ID=mRNA_P-wetherbeei_contig58528.1.1|Name=mRNA_P-wetherbeei_contig58528.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig58528:1..504+ (Phaeothamnion wetherbeei SAG_119_79)back to top |