mRNA_P-wetherbeei_contig10202.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: A0A836CEJ3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ3_9STRA) HSP 1 Score: 320 bits (821), Expect = 7.570e-101 Identity = 169/219 (77.17%), Postives = 185/219 (84.47%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIV 678 KL++LIRAVRACKTAA ER+VV+QE A+IRTAFKEEQ+EYRNRNVAKLLF+HMLG YPSHFGQ+ECIKLITSP F DKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLN+ NPF+VGLAL VGNLATPDIARDLMMDVDR+LQS NPYLRKKAALC IRIL+K P+HVEDF ERIV V++DRHHGVLLAGVQL+TSIV Sbjct: 4 KLKELIRAVRACKTAAAERSVVSQELALIRTAFKEEQLEYRNRNVAKLLFMHMLG----------------------YPSHFGQMECIKLITSPEFTDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNSQNPFVVGLALTTVGNLATPDIARDLMMDVDRYLQSNNPYLRKKAALCTIRILQKNPDHVEDFAERIVGVLKDRHHGVLLAGVQLMTSIV 200
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI) HSP 1 Score: 296 bits (757), Expect = 2.950e-91 Identity = 154/220 (70.00%), Postives = 178/220 (80.91%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIVE 681 +LR+LIRAVRACKTAA+ER VVAQECA IRTAFKEE E+RNRNVAKLLFIHMLG YPSHFGQ+ECIKLITSP + DKRIGYLGL LLLT++EEVLMLVTNSLKVD+++ N F+ GL+L VGNLATPDIARDLMM+V++HL+ PYL KKAALC IRILR +PEHVEDF ERI+ V++DRHHGVL+AGVQLIT++VE Sbjct: 4 RLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDTEFRNRNVAKLLFIHMLG----------------------YPSHFGQMECIKLITSPNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDMHSSNMFVAGLSLTTVGNLATPDIARDLMMEVEKHLRGGRPYLVKKAALCCIRILRHLPEHVEDFMERIMEVLKDRHHGVLVAGVQLITAVVE 201
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: K8YRB5_NANGC (AP-1 complex subunit gamma-1 (Fragment) n=3 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRB5_NANGC) HSP 1 Score: 276 bits (706), Expect = 7.700e-86 Identity = 145/220 (65.91%), Postives = 175/220 (79.55%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIVE 681 +LR+LIRAVRACKTAA+ERAV+A+E A+IRTA KEE +YR+RNVAKLLFIHMLG YPSHFGQ+EC+KLI SP F +KRIGYLGL LLLTE+EEVL LVTNS+K DLN+PNPF+VGLAL+AVGNLAT DIARDL MDVD+HL+S N YLRKKAAL IRI +K+P+ VEDF ERI S+++DR HGVL+A V+L+T +++ Sbjct: 10 RLRELIRAVRACKTAAEERAVIAKESALIRTAIKEEHEQYRHRNVAKLLFIHMLG----------------------YPSHFGQMECLKLIASPHFFEKRIGYLGLSLLLTEQEEVLTLVTNSIKNDLNSPNPFVVGLALSAVGNLATEDIARDLAMDVDKHLKSNNSYLRKKAALATIRIFQKVPDLVEDFIERITSLLKDRSHGVLIAAVELMTEVMK 207
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA) HSP 1 Score: 276 bits (706), Expect = 6.810e-84 Identity = 145/220 (65.91%), Postives = 175/220 (79.55%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIVE 681 +LR+LIRAVRACKTAA+ERAV+A+E A+IRTA KEE +YR+RNVAKLLFIHMLG YPSHFGQ+EC+KLI SP F +KRIGYLGL LLLTE+EEVL LVTNS+K DLN+PNPF+VGLAL+AVGNLAT DIARDL MDVD+HL+S N YLRKKAAL IRI +K+P+ VEDF ERI S+++DR HGVL+A V+L+T +++ Sbjct: 4 RLRELIRAVRACKTAAEERAVIAKESALIRTAIKEEHEQYRHRNVAKLLFIHMLG----------------------YPSHFGQMECLKLIASPHFFEKRIGYLGLSLLLTEQEEVLTLVTNSIKNDLNSPNPFVVGLALSAVGNLATEDIARDLAMDVDKHLKSNNSYLRKKAALATIRIFQKVPDLVEDFIERITSLLKDRSHGVLIAAVELMTEVMK 201
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: A0A425C4M0_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425C4M0_9STRA) HSP 1 Score: 259 bits (662), Expect = 4.370e-83 Identity = 135/219 (61.64%), Postives = 169/219 (77.17%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIV 678 KLRDLIR VRACKTAA+ERAV+A+E A+IRTAFK+ +YR+RNVAKLLFIHMLG YPSHFGQ+EC+KLI + F +KRIGYLGLMLLLT++EEVL LVTNSLK DLN+ NPF+VGL+L AVGN+A+PD+ARDL+ D+D+HL+S N +LRKKAAL IR+ R++PE VEDF E I+ ++R ++H VLL GVQLI ++ Sbjct: 4 KLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLG----------------------YPSHFGQMECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKKAALACIRVFRQVPELVEDFVEPILDLLRSKNHAVLLTGVQLIVDLL 200
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: A0A397DE85_9STRA (Adaptin_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE85_9STRA) HSP 1 Score: 259 bits (662), Expect = 8.640e-83 Identity = 135/219 (61.64%), Postives = 169/219 (77.17%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIV 678 KLRDLIR VRACKTAA+ERAV+A+E A+IRTAFK+ +YR+RNVAKLLFIHMLG YPSHFGQ+EC+KLI + F +KRIGYLGLMLLLT++EEVL LVTNSLK DLN+ NPF+VGL+L AVGN+A+PD+ARDL+ D+D+HL+S N +LRKKAAL IR+ R++PE VEDF E I+ ++R ++H VLL GVQLI ++ Sbjct: 4 KLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLG----------------------YPSHFGQMECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKKAALACIRVFRQVPELVEDFVEPILDLLRSKNHAVLLTGVQLIVDLL 200
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: A0A7S2PCH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PCH4_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.280e-82 Identity = 136/219 (62.10%), Postives = 168/219 (76.71%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIV 678 KLRDLIR VRACKTAA+ERAV+A+E A+IRTA +EEQ YR+RNVAKLLF+HMLG YP+HFGQ+EC+KL+ SP FP+KRIGYLG+MLLL+E++EVLML TNSLK DLN+ N FI GLALA +GNLATPD++RDL +VD+HL ++NPYLRKKA L M R LRK P+ VEDF ER+V ++ DR HGVL+ VQL+T ++ Sbjct: 4 KLRDLIRQVRACKTAAEERAVIAKESAMIRTAIREEQEHYRHRNVAKLLFMHMLG----------------------YPTHFGQLECMKLVASPHFPEKRIGYLGMMLLLSEQQEVLMLATNSLKNDLNSSNKFIAGLALATIGNLATPDMSRDLAPEVDKHLSNSNPYLRKKACLAMARCLRKCPDMVEDFVERVVGLLNDRSHGVLITVVQLMTQVL 200
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: H3G6T5_PHYRM (AP-1 complex subunit gamma n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3G6T5_PHYRM) HSP 1 Score: 270 bits (689), Expect = 1.100e-81 Identity = 141/219 (64.38%), Postives = 173/219 (79.00%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIV 678 KLRDLIR VRACKTAA+ERAV+A+E A+IRTAFK+++ +YR+RNVAKLLFIHMLG YPSHFGQ+EC+KLI SP F +KR+GYLGL+LLLT++E+VL LVTNS+K DLNN N FIV L+L AVGN+A+ D+ARDL+MDVDRHL+S N +LRKKAAL IR+ K+P+ VEDFTE IV ++R +HHGVLLAGVQLIT +V Sbjct: 4 KLRDLIRGVRACKTAAEERAVIAKESALIRTAFKDQEKQYRHRNVAKLLFIHMLG----------------------YPSHFGQMECVKLIASPYFAEKRMGYLGLILLLTDQEDVLTLVTNSVKNDLNNQNHFIVALSLTAVGNVASADMARDLVMDVDRHLRSDNEHLRKKAALAAIRVFTKVPDLVEDFTESIVGLLRAKHHGVLLAGVQLITEVV 200
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: A0A421F383_9STRA (AP-1 complex subunit gamma n=8 Tax=Phytophthora TaxID=4783 RepID=A0A421F383_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.400e-81 Identity = 141/220 (64.09%), Postives = 174/220 (79.09%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIVE 681 KLRDLIR VRACKTAA+ERAV+A+E A+IRTAFK++ +YR+RNVAKLLFIHMLG YPSHFGQ+EC+KLI SP F +KR+GYLGL+LLLT++E+VL LVTNS+K DLNN N FIV L+LAAVGN+A+ D+ARDL+MDVDRHL+S N +LRKKAAL IR+ K+P+ VEDFTE I+ ++R +HHGVLLAGVQLIT +V+ Sbjct: 4 KLRDLIRGVRACKTAAEERAVIAKESAMIRTAFKDQDKQYRHRNVAKLLFIHMLG----------------------YPSHFGQMECVKLIASPYFAEKRMGYLGLILLLTDQEDVLTLVTNSVKNDLNNSNHFIVALSLAAVGNVASADMARDLVMDVDRHLRSDNEHLRKKAALAAIRVFTKVPDLVEDFTESILGLLRAKHHGVLLAGVQLITEVVK 201
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Match: A0A7S1U5B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5B6_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.960e-81 Identity = 137/220 (62.27%), Postives = 168/220 (76.36%), Query Frame = 1 Query: 22 KLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVAKLLFIHMLGASNKDEFLEMACIPPVFVSLRSYPSHFGQIECIKLITSPAFPDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNNPNPFIVGLALAAVGNLATPDIARDLMMDVDRHLQSTNPYLRKKAALCMIRILRKIPEHVEDFTERIVSVIRDRHHGVLLAGVQLITSIVE 681 +LR+LIRAVRACKTAA+ERAV+A+ECA+IRTAFK+ +R+RNVAKLLFIHMLG YPSH+GQ+EC++LI S +FP+KRIGYLGLMLLLTE EEVL LVTNS+K DLN+ N F+VGLAL VGNLAT DIARDL D+DR L+STNPY+RKKAAL M+R+L+K+PE EDF ERI +I+DR HGV + + L+ +VE Sbjct: 4 RLRELIRAVRACKTAAEERAVIAKECALIRTAFKDNNETFRHRNVAKLLFIHMLG----------------------YPSHWGQMECVRLIASQSFPEKRIGYLGLMLLLTEHEEVLTLVTNSIKQDLNHQNQFVVGLALTCVGNLATEDIARDLATDIDRLLRSTNPYIRKKAALAMVRVLKKVPELTEDFVERITQLIKDRSHGVQMTAMTLMIDVVE 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10202.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10202.1.1 >prot_P-wetherbeei_contig10202.1.1 ID=prot_P-wetherbeei_contig10202.1.1|Name=mRNA_P-wetherbeei_contig10202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp MSSAGKLRDLIRAVRACKTAADERAVVAQECAVIRTAFKEEQIEYRNRNVback to top mRNA from alignment at P-wetherbeei_contig10202:406..1915- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10202.1.1 ID=mRNA_P-wetherbeei_contig10202.1.1|Name=mRNA_P-wetherbeei_contig10202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1510bp|location=Sequence derived from alignment at P-wetherbeei_contig10202:406..1915- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10202:406..1915- >mRNA_P-wetherbeei_contig10202.1.1 ID=mRNA_P-wetherbeei_contig10202.1.1|Name=mRNA_P-wetherbeei_contig10202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig10202:406..1915- (Phaeothamnion wetherbeei SAG_119_79)back to top |