mRNA_P-wetherbeei_contig58513.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A3D5DEY9_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DEY9_9GAMM) HSP 1 Score: 171 bits (432), Expect = 3.220e-51 Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWRSKKGPAQ 318
TKHAAVAFAEWV+IKYRD+GI VSVLAPQAVRTPMTDRP+GA VAS+DGMIEPE L D VIETMA+EEFLM+PH V+ YMARK +IDRWL GMNRWR+K GPA+
Sbjct: 152 TKHAAVAFAEWVSIKYRDQGICVSVLAPQAVRTPMTDRPEGAIVASLDGMIEPEDLTDYVIETMAKEEFLMIPHQEVKGYMARKNEDIDRWLVGMNRWRTKSGPAR 257
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A192IGE4_9HYPH (Short-chain dehydrogenase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IGE4_9HYPH) HSP 1 Score: 139 bits (350), Expect = 7.390e-39 Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWRSKK 306
TKHAAV+FAEW++I Y D+G+ VSVLAPQAVRT MT + SVAS+DGMIEPEQLADCVIETM +EEFL+LPH VR+YM RK ++DRWL GM R+++K+
Sbjct: 152 TKHAAVSFAEWLSINYGDRGVHVSVLAPQAVRTAMTSGRN-VSVASVDGMIEPEQLADCVIETMDKEEFLILPHEQVREYMKRKALDVDRWLSGMRRFKAKR 252
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A523PGV1_9PROT (SDR family oxidoreductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PGV1_9PROT) HSP 1 Score: 138 bits (348), Expect = 1.370e-38 Identity = 68/101 (67.33%), Postives = 83/101 (82.18%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWRSK 303
TKHAAVA AEW+AI+Y DKG+RVSVLAPQAVRT MT DG VAS+DGMIE ++LADCV+ TM E+FL+LPHP+V +YM RKV ++DRWL GM R ++K
Sbjct: 151 TKHAAVALAEWLAIEYGDKGVRVSVLAPQAVRTAMTAGRDGL-VASVDGMIEADELADCVVRTMEEEKFLILPHPIVANYMQRKVNDVDRWLSGMRRLKAK 250
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A2G1Z2F8_9PROT (Short-chain dehydrogenase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2G1Z2F8_9PROT) HSP 1 Score: 136 bits (342), Expect = 2.860e-38 Identity = 71/105 (67.62%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWRSKKGPA 315
TKHAAVAFAE +AI+Y DKGI VSVL PQ+VRT M GA VAS+DG +EPEQLADCVIETM REEFL+LPHP VRDY+ RK + DRWL GM R R + P
Sbjct: 100 TKHAAVAFAETMAIRYGDKGIHVSVLCPQSVRTAMASERGGA-VASVDGTLEPEQLADCVIETMDREEFLILPHPQVRDYIKRKTSDYDRWLSGMRRLRDRYLPG 203
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A2D6T5R4_9PROT (Short-chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T5R4_9PROT) HSP 1 Score: 137 bits (345), Expect = 4.280e-38 Identity = 69/97 (71.13%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNR 291
TKHAAVA AE++AIKY D+G+ VSVL PQAVRT MT R D VA++DGMIEPE+LA+CVIETM REEFL+LPHPVV DYM RK + DRWL GM R
Sbjct: 152 TKHAAVALAEFLAIKYGDRGVHVSVLCPQAVRTAMT-RDDEGGVAAVDGMIEPEELAECVIETMEREEFLILPHPVVLDYMRRKTSDYDRWLSGMRR 247
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A2G1Z0D1_9PROT (Short-chain dehydrogenase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2G1Z0D1_9PROT) HSP 1 Score: 131 bits (329), Expect = 1.010e-35 Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWR 297
TKHAA+AFAE +AI+Y DKGIRVSVL PQ VRT MT+ +G +VA++DG +EPE+LADCV+ +MA+EEFL+LPHP V +Y+ RK GN DRWL GM + R
Sbjct: 152 TKHAAIAFAETMAIRYGDKGIRVSVLCPQQVRTAMTEGHEG-NVAAVDGTMEPEELADCVVASMAKEEFLILPHPQVLEYIQRKTGNYDRWLSGMRKLR 249
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A2E2QFI8_9PROT (Short-chain dehydrogenase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2E2QFI8_9PROT) HSP 1 Score: 130 bits (328), Expect = 1.420e-35 Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMT-DRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWR 297
TKHAAVAFAE ++I+Y DKGI VSVL PQ+VRT MT DG VAS+DG++EPEQLADCV+ETM +EEFL+LPHP VR+YM RK G+ DRWL+GM + R
Sbjct: 152 TKHAAVAFAETLSIRYGDKGICVSVLCPQSVRTAMTASLLDG--VASVDGVLEPEQLADCVVETMDKEEFLILPHPQVREYMMRKAGDYDRWLKGMRKLR 249
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A1Z9K7F8_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TMED180 TaxID=1986740 RepID=A0A1Z9K7F8_9GAMM) HSP 1 Score: 130 bits (328), Expect = 1.570e-35 Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMT-DRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWRSKKG 309
TKHAAV+FAEW+AI Y D+G++VSVL PQAVRT MT D PDG VAS+DGMIEPEQ+++ V+ T+ E FL+LPHP V DYM RK G+ DRW+EGM + +S G
Sbjct: 152 TKHAAVSFAEWLAITYGDRGLKVSVLCPQAVRTAMTADDPDG--VASVDGMIEPEQVSEAVVTTLKNESFLVLPHPKVLDYMQRKSGDYDRWIEGMKKLQSSYG 253
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: A0A1Y5S2C0_9PROT (Putative ketoacyl reductase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5S2C0_9PROT) HSP 1 Score: 130 bits (327), Expect = 2.010e-35 Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWRSK 303
TKHAAVAFAE +AI+Y DKG+RVSVL PQ+VRT MT + VA++DGMIEPE LADCV+ETM REEFL+LPHP V +YM RK + DRWL GM R R +
Sbjct: 152 TKHAAVAFAETLAIRYGDKGVRVSVLCPQSVRTAMTAGHEN-HVAAVDGMIEPEVLADCVVETMDREEFLILPHPQVIEYMRRKTADYDRWLSGMRRLRDR 251
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Match: UPI00146BA16D (SDR family oxidoreductase n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146BA16D) HSP 1 Score: 130 bits (327), Expect = 2.010e-35 Identity = 66/99 (66.67%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 1 TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMIEPEQLADCVIETMAREEFLMLPHPVVRDYMARKVGNIDRWLEGMNRWR 297
+KHAAVAFAE +AI+Y DKG+RVSVL PQ VRT MT G SV+ +DG +EPE+LADCVIETM REEFL+LPHP V DYM RK + DRW+ GM R R
Sbjct: 152 SKHAAVAFAETLAIRYGDKGVRVSVLCPQQVRTAMTQNRAG-SVSDVDGTLEPEELADCVIETMDREEFLILPHPKVLDYMRRKTADYDRWINGMRRLR 249 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58513.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58513.1.1 >prot_P-wetherbeei_contig58513.1.1 ID=prot_P-wetherbeei_contig58513.1.1|Name=mRNA_P-wetherbeei_contig58513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp TKHAAVAFAEWVAIKYRDKGIRVSVLAPQAVRTPMTDRPDGASVASIDGMback to top mRNA from alignment at P-wetherbeei_contig58513:6..329+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58513.1.1 ID=mRNA_P-wetherbeei_contig58513.1.1|Name=mRNA_P-wetherbeei_contig58513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig58513:6..329+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58513:6..329+ >mRNA_P-wetherbeei_contig58513.1.1 ID=mRNA_P-wetherbeei_contig58513.1.1|Name=mRNA_P-wetherbeei_contig58513.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig58513:6..329+ (Phaeothamnion wetherbeei SAG_119_79)back to top |