prot_P-wetherbeei_contig58506.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58506.1.1
Unique Nameprot_P-wetherbeei_contig58506.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length80
Homology
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BLAST of mRNA_P-wetherbeei_contig58506.1.1 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.530e-24
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:    1 MAETEELLRHKILGSIGGGPYELLRAFRRMHRGRGIAVTVDDFHQAVRDFGFSMTPDEVERFFHAFDYDANGSIDFHEVC 80
            MAE E+LLR KILGSIGGGP++LLRAFR+MHRGRG  V ++DF +AV+ F   +   EVE FF  FD D +G IDF E C
Sbjct:  259 MAENEQLLRQKILGSIGGGPFQLLRAFRKMHRGRGTVVDLNDFREAVKTFSLGLGEPEVEAFFKGFDADGSGGIDFEEFC 338
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58506.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWU7_ECTSI1.530e-2461.25EF-hand, calcium binding motif n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 4..80
e-value: 5.3E-11
score: 44.2
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 67..79
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..80
score: 11.165957
IPR002048EF-hand domainCDDcd00051EFhcoord: 22..80
e-value: 8.48056E-8
score: 42.5349
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 22..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58506contigP-wetherbeei_contig58506:5..244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58506.1.1mRNA_P-wetherbeei_contig58506.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58506 2..244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58506.1.1 ID=prot_P-wetherbeei_contig58506.1.1|Name=mRNA_P-wetherbeei_contig58506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp
MAETEELLRHKILGSIGGGPYELLRAFRRMHRGRGIAVTVDDFHQAVRDF
GFSMTPDEVERFFHAFDYDANGSIDFHEVC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair