mRNA_P-wetherbeei_contig58396.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: UPI0015F46056 (redoxin domain-containing protein n=1 Tax=Nitrosopumilus sp. b1 TaxID=2109907 RepID=UPI0015F46056) HSP 1 Score: 135 bits (339), Expect = 9.160e-35 Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 1
Query: 1 RSGQVVRQWPGDIQEHLPDLRTAVASALAASGEVDTGSLPA--LTTVGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEM--VRQQGDAQRRRRVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDR 477
R G+VV +W G + D + V AL G + + + +GFA AF AG+LS LSPCVLPL+P YA+++TG SV EM V QG Q R L+ GLLF+LGFS++F+A+GAS + GS+ D W+ARIGG+I++ G+H+LG+++IP L R
Sbjct: 134 RQGEVVYEWRGAFEPMSEDTKHKVNIAL---GNIKNDLIEEDQIAAIGFALAFSAGLLSFLSPCVLPLIPAYASFLTGTSVKEMENVNAQGQNQVHYRYNALKRGLLFVLGFSVIFVAIGASTAFVGSFFTDASEWIARIGGIIVIIFGLHILGILKIPILSR 293
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A060HK32_9ARCH (Disulfide bond oxidoreductase D family protein n=1 Tax=Nitrososphaera viennensis EN76 TaxID=926571 RepID=A0A060HK32_9ARCH) HSP 1 Score: 129 bits (324), Expect = 2.300e-32 Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 1 RSGQVVRQWPGDIQEHLPDLRTAVASALAASGEV---DTGSLPA--------LTTVGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMV---RQQGDAQRRRRVTTLRN-----GLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDR 477
+ G V+ QW G D R+ V +AL S V D PA TV AF AG+LS LSPCVLPL+P+YAA+ITG+S+D++ R + + ++ T RN G LF+LGFS+VF+ALGA+ S FG + D+ +W+ RIGG++L+ G+H+LGL+RIP +++
Sbjct: 153 KDGYVLHQWKGAFDPMSEDTRSRVQAALTMSSIVVGKDGKPAPAGGAAAAIEAPTVSAGVAFSAGLLSFLSPCVLPLIPSYAAFITGMSMDQLTGNARSENASSSSQQTRTARNTIIARGGLFVLGFSIVFVALGATISTFGFFFGDYAVWIGRIGGIMLMVFGLHLLGLLRIPGVEK 330
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A2V7KMP5_9BACT (Cytochrome C biogenesis protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7KMP5_9BACT) HSP 1 Score: 118 bits (295), Expect = 4.610e-31 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 133 VGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRRRVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSRPMLDR 501
VG A AF AG+LS LSPCVLPL+P+Y Y+TG+SV+E+ RRR T + +GL F+ GFSLVF+ LGA+AS G+ L D+++WL R+GGV+L+ GV++LG++R +L R R L R
Sbjct: 3 VGVAVAFAAGLLSFLSPCVLPLIPSYIGYLTGMSVEEV--------ERRRGTAVLHGLWFVAGFSLVFVLLGAAASAVGNLLRDYQVWLGRVGGVLLILFGVYLLGILRPAFLMREWRIELAR 117
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A838NUU4_9BACT (Cytochrome c biogenesis protein CcdA n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A838NUU4_9BACT) HSP 1 Score: 119 bits (297), Expect = 3.990e-30 Identity = 58/121 (47.93%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 133 VGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRRRVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSRPML 495
+GF AFGAG+LS LSPCVLPL+P+Y ++TG+SV+ D +R R+ TTL + LF+LGF+ +F+ALGA+A++ G + WR W++RIGGV+++ G++MLG+ R+ +L R R L
Sbjct: 5 LGFGVAFGAGLLSFLSPCVLPLIPSYITFLTGLSVE-------DVERGRKTTTLIHASLFILGFTAIFLALGATATMLGQMMLAWRDWISRIGGVLIILFGLYMLGVFRMAFLGRERRVYL 118
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A842P481_9ARCH (Redoxin domain-containing protein n=1 Tax=Nitrosopumilus sp. TaxID=2024843 RepID=A0A842P481_9ARCH) HSP 1 Score: 122 bits (307), Expect = 4.290e-30 Identity = 63/162 (38.89%), Postives = 103/162 (63.58%), Query Frame = 1
Query: 1 RSGQVVRQWPGDIQEHLPDLRTAVASALAASGEVDTGSLPALTT---VGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRRRVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDR 477
+ G ++ QW G + D V SAL S L + + AFGAG+LS LSPCVLPL+P YA+++TG+SV ++ + ++ + +T ++ GL+F+LGFS++FI LG+S GS L D +W+ RIGG++L+ +G+H++G+++IPWL++
Sbjct: 146 KDGMILHQWKGAFEPMSQDTILRVNSALNDMPFEQVNSENLLDSDFRLSLIIAFGAGLLSFLSPCVLPLIPVYASFLTGLSVQDLSAKSKTSKSKFGIT-MKRGLMFVLGFSVIFIILGSSVGYAGSVLLDAVVWIERIGGIVLIVLGLHLIGILKIPWLEK 306
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A3M6JX34_9ARCH (Thioredoxin domain-containing protein n=1 Tax=Candidatus Nitrosomarinus sp. TaxID=2478979 RepID=A0A3M6JX34_9ARCH) HSP 1 Score: 122 bits (306), Expect = 6.060e-30 Identity = 66/165 (40.00%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 7 GQVVRQWPGDIQEHLPDLRTAVASALAASGEVDTGSLPALTT----VGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRR-RVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSR 486
GQ++ W G+ D V S + G S P + T GF AF AG+LS LSPCVLPL+P YA+ ITG+S E+ ++ R + R+T G++F++GFS++F+ LG + S G+ +D W+ RIGGV+L+ +G+HM+GL +IP L+R R
Sbjct: 150 GQIIYHWKGEFDPVSEDTINLVQSTI--MGTSYQSSEPTILTDGLVAGFVIAFSAGVLSFLSPCVLPLIPVYASLITGMSAKELSQETSQVTRSKLRLTATGKGIMFVIGFSIIFMLLGTTVSFMGNLFFDSIQWIERIGGVVLIVLGLHMIGLFKIPKLERQMR 312
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0RTN3_CENSY (Cytochrome c biogenesis protein n=1 Tax=Cenarchaeum symbiosum (strain A) TaxID=414004 RepID=A0RTN3_CENSY) HSP 1 Score: 120 bits (300), Expect = 2.290e-29 Identity = 71/169 (42.01%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 7 GQVVRQWPGDIQEHLPDLRTAVAS-ALAASGEVDTGS--LPALTTVGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEM----VRQQGDAQRRRRVTT--LRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSR 486
G +++QW G I+ + T A+ +A +G +++GS + +G A AF AG+LS LSPCVLPL+P YA +ITG+S+ E+ G AQ R RV T L G LF+LGFS+VF++LG + S S L+D +W+ RIGG+ ++ G+H+LG+ RI L+ R
Sbjct: 87 GSIIQQWKGPIEPGMGVEETIEAALGIAPAGVIESGSVGISEAEVIGLAVAFSAGLLSFLSPCVLPLVPAYATFITGMSLKELSSGRTNTGGGAQSRLRVRTVALTRGSLFVLGFSVVFVSLGIAVSYVSS-LFDAAMWIERIGGIAIIIFGLHLLGVFRIRRLNMEKR 254
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A0R2NRN3_9ARCH (Thioredoxin domain-containing protein n=7 Tax=Nitrosopumilaceae TaxID=338190 RepID=A0A0R2NRN3_9ARCH) HSP 1 Score: 120 bits (300), Expect = 4.410e-29 Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 7 GQVVRQWPGDIQEHLPDLRTAVASALAASGEVDTGSLPALTT----VGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRR-RVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSR 486
GQ++ QW G D V + + G S P + + GF AF AG+LS LSPCVLPL+P YA+ ITG+S E+ ++ A R + R+T G++F++GFS++F+ LG + S G+ +D W+ RIGGV+L+ +G+HM+G+ +IP L++ R
Sbjct: 150 GQIIHQWKGAFDPVSDDTINLVEATI--QGTSYQSSEPTILSDGLIAGFVIAFSAGVLSFLSPCVLPLIPVYASLITGMSAKELSQETSQATRSKLRLTATVKGIMFVIGFSIIFMLLGTTVSFMGNLFFDSIQWIERIGGVVLIVLGLHMIGVFKIPRLEKQMR 312
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: UPI001930DBB4 (redoxin family protein n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001930DBB4) HSP 1 Score: 120 bits (300), Expect = 4.520e-29 Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 1 RSGQVVRQWPGDIQEHLPDLRTAVASALAASG--------EVDTGSLPALTTVGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRRRVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSRPMLDR 501
++G VVR+WPG + E + A+ A+A+SG E S + VG AA AG+LS LSPCVLPL+P+Y A + GV + A+R R TL + + F+LGFS VFIALGASA+ G L + W+ RIGGV+L+A GV +LGL+ + L R +R +LDR
Sbjct: 142 KNGVVVRRWPGALTEDDTTIDAAIERAIASSGAYVKRADTETKEASAISFGVVGALAAVIAGLLSFLSPCVLPLVPSYVALLAGV-------RGAGAKRASRRETLTHAVAFVLGFSAVFIALGASATALGDALRGYDEWITRIGGVLLIAFGVMLLGLIPLAILQRDTR-LLDR 308
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Match: A0A2W4SEX8_9BACT (Cytochrome C biogenesis protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2W4SEX8_9BACT) HSP 1 Score: 116 bits (290), Expect = 5.200e-29 Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 130 TVGFAAAFGAGMLSVLSPCVLPLLPTYAAYITGVSVDEMVRQQGDAQRRRRVTTLRNGLLFMLGFSLVFIALGASASVFGSWLYDWRIWLARIGGVILLAMGVHMLGLVRIPWLDRTSRPMLD 498
++GFA AF AG+LS LSPCVLPL+P+YA++ITG+ +D++ D RR L +GLLF+ GF+LVFIALGASA++ GS + +R W+ R GGV+L+ G+ +LG++R+P +R R L
Sbjct: 5 SLGFAVAFTAGLLSFLSPCVLPLIPSYASFITGIGLDDLADGGRDRAHVRRAL-LAHGLLFIAGFTLVFIALGASATLIGSIFHVYRDWIERTGGVLLVLFGLLLLGVLRVPGAERDWRIQLS 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58396.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58396.1.1 >prot_P-wetherbeei_contig58396.1.1 ID=prot_P-wetherbeei_contig58396.1.1|Name=mRNA_P-wetherbeei_contig58396.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp RSGQVVRQWPGDIQEHLPDLRTAVASALAASGEVDTGSLPALTTVGFAAAback to top mRNA from alignment at P-wetherbeei_contig58396:2..502+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58396.1.1 ID=mRNA_P-wetherbeei_contig58396.1.1|Name=mRNA_P-wetherbeei_contig58396.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58396:2..502+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58396:2..502+ >mRNA_P-wetherbeei_contig58396.1.1 ID=mRNA_P-wetherbeei_contig58396.1.1|Name=mRNA_P-wetherbeei_contig58396.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58396:2..502+ (Phaeothamnion wetherbeei SAG_119_79)back to top |