mRNA_P-wetherbeei_contig58365.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58365.1.1
Unique NamemRNA_P-wetherbeei_contig58365.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A1W9KQ62_9BURK (Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens TaxID=192843 RepID=A0A1W9KQ62_9BURK)

HSP 1 Score: 60.1 bits (144), Expect = 2.280e-10
Identity = 29/45 (64.44%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQPLKKSA 243
            +MAL WTAAGFLE EKSF+KLRG+A +K L+N+LR  ++ LKK+A
Sbjct:   16 EMALLWTAAGFLEDEKSFKKLRGHADLKILINSLRPASEQLKKAA 60
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: U5NES3_9BURK (Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR TaxID=946483 RepID=U5NES3_9BURK)

HSP 1 Score: 57.8 bits (138), Expect = 3.320e-9
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:  106 AQMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQPLKKSA 243
            A+MA RWTAAGFLEA KS +KLRG+A +K L+N+LR  +Q +KK+A
Sbjct:   39 AEMAPRWTAAGFLEAVKSCKKLRGHADLKILINSLRPVSQQVKKAA 84
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A2V8DRN6_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DRN6_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 3.970e-7
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:  100 QGAQMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQPL 231
            +G QM LRW AAG LEA K FR+L+GYA M TL+ ALR+  + L
Sbjct:   25 RGGQMMLRWVAAGVLEAVKGFRRLKGYADMPTLVAALRARDRQL 68
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A1U1HQY1_9MYCO (Transposase n=1 Tax=Mycobacteroides abscessus subsp. abscessus TaxID=1185650 RepID=A0A1U1HQY1_9MYCO)

HSP 1 Score: 53.1 bits (126), Expect = 6.690e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++GY Q+  L++ALR +A P
Sbjct:   90 QMVLRWTAAGMLNAERSFRRIKGYKQIPQLVDALRRHANP 129
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A2V0N832_9MYCO (Uncharacterized protein n=1 Tax=Mycobacterium sp. MFM001 TaxID=2049453 RepID=A0A2V0N832_9MYCO)

HSP 1 Score: 53.1 bits (126), Expect = 8.090e-7
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++GY QM  L++ALR +  P
Sbjct:  101 QMVLRWTAAGMLNAERSFRRIKGYKQMPQLVDALRRHVNP 140
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A2A7MPZ9_MYCAG (Mutator family transposase n=1 Tax=Mycolicibacterium agri TaxID=36811 RepID=A0A2A7MPZ9_MYCAG)

HSP 1 Score: 54.7 bits (130), Expect = 8.690e-7
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++GY QM  L++ALR +A P
Sbjct:  383 QMVLRWTAAGMLNAERSFRRIKGYKQMPQLVDALRRHANP 422
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: I2AD02_9MYCO (Mutator family transposase n=1 Tax=Mycobacterium sp. MOTT36Y TaxID=1168287 RepID=I2AD02_9MYCO)

HSP 1 Score: 53.1 bits (126), Expect = 1.070e-6
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++GY Q+  L++ALR +A P
Sbjct:  119 QMVLRWTAAGMLNAERSFRRIKGYKQIPQLVDALRRHANP 158
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A081HXW8_9MYCO (Mutator family transposase n=3 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A081HXW8_9MYCO)

HSP 1 Score: 53.1 bits (126), Expect = 1.180e-6
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++GY Q+  L++ALR +A P
Sbjct:  126 QMVLRWTAAGMLNAERSFRRIKGYKQIPQLVDALRRHANP 165
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: A0A081HXT3_9MYCO (Uncharacterized protein n=3 Tax=Mycobacterium TaxID=1763 RepID=A0A081HXT3_9MYCO)

HSP 1 Score: 53.1 bits (126), Expect = 1.250e-6
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++GY Q+  L++ALR +A P
Sbjct:  131 QMVLRWTAAGMLNAERSFRRIKGYKQIPQLVDALRRHANP 170
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BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Match: G4H032_MYCRN (Mutator family transposase n=5 Tax=Mycobacteriaceae TaxID=1762 RepID=G4H032_MYCRN)

HSP 1 Score: 52.8 bits (125), Expect = 4.150e-6
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:  109 QMALRWTAAGFLEAEKSFRKLRGYAQMKTLLNALRSNAQP 228
            QM LRWTAAG L AE+SFR+++G+ QM  L++ALR +A P
Sbjct:  383 QMVLRWTAAGMLNAERSFRRIKGHKQMPQLVDALRRHAHP 422
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58365.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A1W9KQ62_9BURK2.280e-1064.44Uncharacterized protein n=1 Tax=Rhodoferax ferrire... [more]
U5NES3_9BURK3.320e-963.04Uncharacterized protein n=1 Tax=Candidatus Symbiob... [more]
A0A2V8DRN6_9BACT3.970e-759.09Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A1U1HQY1_9MYCO6.690e-760.00Transposase n=1 Tax=Mycobacteroides abscessus subs... [more]
A0A2V0N832_9MYCO8.090e-760.00Uncharacterized protein n=1 Tax=Mycobacterium sp. ... [more]
A0A2A7MPZ9_MYCAG8.690e-762.50Mutator family transposase n=1 Tax=Mycolicibacteri... [more]
I2AD02_9MYCO1.070e-660.00Mutator family transposase n=1 Tax=Mycobacterium s... [more]
A0A081HXW8_9MYCO1.180e-660.00Mutator family transposase n=3 Tax=Mycobacteriacea... [more]
A0A081HXT3_9MYCO1.250e-660.00Uncharacterized protein n=3 Tax=Mycobacterium TaxI... [more]
G4H032_MYCRN4.150e-660.00Mutator family transposase n=5 Tax=Mycobacteriacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58365contigP-wetherbeei_contig58365:20..265 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog710685.MycrhN_2504
PFAMsTransposase_mut
Model size247
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.8e-07
EggNOG OGsCOG3328@1|root,COG3328@2|Bacteria,2H21E@201174|Actinobacteria,23D4X@1762|Mycobacteriaceae
DescriptionTransposase, Mutator family
Cds size246
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186864.4977458-CDS-P-wetherbeei_contig58365:19..2651683186864.4977458-CDS-P-wetherbeei_contig58365:19..265Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58365 20..265 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58365.1.1prot_P-wetherbeei_contig58365.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58365 20..265 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58365.1.1

>prot_P-wetherbeei_contig58365.1.1 ID=prot_P-wetherbeei_contig58365.1.1|Name=mRNA_P-wetherbeei_contig58365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp
SGSPASWHAAWARPTSLSRPTWWCAESVDGDELQGAQMALRWTAAGFLEA
EKSFRKLRGYAQMKTLLNALRSNAQPLKKSA*
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mRNA from alignment at P-wetherbeei_contig58365:20..265+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58365.1.1 ID=mRNA_P-wetherbeei_contig58365.1.1|Name=mRNA_P-wetherbeei_contig58365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig58365:20..265+ (Phaeothamnion wetherbeei SAG_119_79)
TCGGGATCACCGGCGAGCTGGCACGCTGCCTGGGCACGACCAACGTCATT
GAGTCGCCCAACTTGGTGGTGCGCAGAGTCAGTGGACGGGGACGAACTAC
AAGGTGCACAGATGGCCTTGCGCTGGACAGCAGCGGGCTTTTTAGAGGCC
GAGAAATCATTCAGGAAGCTGCGTGGGTATGCGCAGATGAAGACACTGCT
CAACGCTCTTCGGTCCAATGCCCAACCACTCAAGAAGTCAGCATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58365:20..265+

>mRNA_P-wetherbeei_contig58365.1.1 ID=mRNA_P-wetherbeei_contig58365.1.1|Name=mRNA_P-wetherbeei_contig58365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig58365:20..265+ (Phaeothamnion wetherbeei SAG_119_79)
TCGGGATCACCGGCGAGCTGGCACGCTGCCTGGGCACGACCAACGTCATT
GAGTCGCCCAACTTGGTGGTGCGCAGAGTCAGTGGACGGGGACGAACTAC
AAGGTGCACAGATGGCCTTGCGCTGGACAGCAGCGGGCTTTTTAGAGGCC
GAGAAATCATTCAGGAAGCTGCGTGGGTATGCGCAGATGAAGACACTGCT
CAACGCTCTTCGGTCCAATGCCCAACCACTCAAGAAGTCAGCATAA
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