prot_P-wetherbeei_contig5835.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5835.4.1
Unique Nameprot_P-wetherbeei_contig5835.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length122
Homology
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BLAST of mRNA_P-wetherbeei_contig5835.4.1 vs. uniprot
Match: A0A7X8XKG3_9BURK (OmpH family outer membrane protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XKG3_9BURK)

HSP 1 Score: 68.6 bits (166), Expect = 3.710e-12
Identity = 35/124 (28.23%), Postives = 72/124 (58.06%), Query Frame = 0 
Query:    1 LRVAKIDTTRIMADMKEYKDLQSEMVKDKQAYYATLPKDPRSIDKAKADQMRVN----AQAKQGEWQKKIADMTQTAIKQITDQTAEVAKARNLDMVVVDTPYSHTVQFIDGPDVSTDVILKLK 120
            + V  ++T RI+ +  +Y DL   +++++ A Y+ +P + + +  A+  Q++      A  + G + K + +  Q     I +   EVA+A+ +DMV++DTPY  TV +  G +++TD++LK++
Sbjct:   25 MTVGVVNTARIVQENPKYLDLNVLLMQERDAVYSQIPANVQQLSDAEKRQLQEKLAKEASERSGRFDKLVREFMQKLQSDIQESAGEVARAKGIDMVIIDTPYHPTVHYNSGENITTDILLKMR 148
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5835.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7X8XKG3_9BURK3.710e-1228.23OmpH family outer membrane protein n=1 Tax=Burkhol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024930Skp domain superfamilyGENE3D3.30.910.20Skp domaincoord: 1..120
e-value: 3.0E-9
score: 39.4
IPR024930Skp domain superfamilySUPERFAMILY111384OmpH-likecoord: 2..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5835contigP-wetherbeei_contig5835:2934..3299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5835.4.1mRNA_P-wetherbeei_contig5835.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5835 2934..3299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5835.4.1 ID=prot_P-wetherbeei_contig5835.4.1|Name=mRNA_P-wetherbeei_contig5835.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
LRVAKIDTTRIMADMKEYKDLQSEMVKDKQAYYATLPKDPRSIDKAKADQ
MRVNAQAKQGEWQKKIADMTQTAIKQITDQTAEVAKARNLDMVVVDTPYS
HTVQFIDGPDVSTDVILKLKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024930Skp_dom_sf