mRNA_P-wetherbeei_contig58320.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58320.1.1
Unique NamemRNA_P-wetherbeei_contig58320.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A3C0TXC0_9PROT (Paraslipin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXC0_9PROT)

HSP 1 Score: 281 bits (720), Expect = 1.910e-93
Identity = 149/168 (88.69%), Postives = 161/168 (95.83%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAVTK 504
            K+VPQSQEYVVEQFGKY KTLP GLNFIIP+++ VASKVSILERQLEPQQISVIT+DNVEIHLTAAVFFRVID AKSVYRITD++ AVKTTVTSIVRSTGGQMEFDE+QS+R+FISEKI+ SLSEACAIWGIEITRTE+LDVSVD ATRSAMQQQLNAERERRAAVTK
Sbjct:   21 KVVPQSQEYVVEQFGKYIKTLPAGLNFIIPVIHSVASKVSILERQLEPQQISVITRDNVEIHLTAAVFFRVIDAAKSVYRITDVNQAVKTTVTSIVRSTGGQMEFDEIQSRRDFISEKIKESLSEACAIWGIEITRTEVLDVSVDDATRSAMQQQLNAERERRAAVTK 188          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A2D7FLI8_9PROT (Paraslipin n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLI8_9PROT)

HSP 1 Score: 203 bits (517), Expect = 1.960e-62
Identity = 107/168 (63.69%), Postives = 133/168 (79.17%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAVTK 504
            K+VPQSQ +VVE+FGKYT+TLP GLNFIIP L+ VA ++SILERQL    ISVITKDNVE+ L A VF+R++D A SVYRI DID A+ T  TSIVRS  G++E DE+QS RE ++E+I  +L +A  IWG+EITRTEI DV +D  T+SA +QQLNAERERRAA+ +
Sbjct:   27 KVVPQSQVFVVERFGKYTRTLPAGLNFIIPFLDGVAHRLSILERQLPEFAISVITKDNVEVKLEATVFYRIVDAAASVYRIQDIDTAIYTAATSIVRSAAGKLELDELQSSRESMNEEIAQNLQDAATIWGVEITRTEITDVVIDDETKSAQRQQLNAERERRAAIAR 194          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A7Z9K8R5_9PROT (SPFH/Band 7/PHB domain protein n=2 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7Z9K8R5_9PROT)

HSP 1 Score: 203 bits (516), Expect = 3.110e-62
Identity = 106/168 (63.10%), Postives = 134/168 (79.76%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAVTK 504
            K+VPQS+ ++VE+FGK+T+TL  GLNFI+P L+ VA K+SILERQL   +ISVITKDNVE+ L A VF+R++D A SVYRI DIDAA+ T  TSIVRS  G++E DE+QS RE ++E+I  +L EA  IWGIEITRTEI DV +D  T+SA +QQLNAERERRAA+ +
Sbjct:   31 KVVPQSKVFIVERFGKFTRTLAAGLNFIVPFLDSVAHKISILERQLPEFRISVITKDNVEVQLEATVFYRLVDAAASVYRIQDIDAAIHTAATSIVRSAAGKLELDELQSSRESMNEEIATNLQEAATIWGIEITRTEITDVVIDDETKSAQRQQLNAERERRAAIAR 198          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A2E4IK73_9GAMM (Paraslipin n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2E4IK73_9GAMM)

HSP 1 Score: 202 bits (514), Expect = 4.660e-62
Identity = 105/166 (63.25%), Postives = 135/166 (81.33%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAV 498
            KIVPQS+EYVVE+FGK+++ LP G+NFI+P L+R+A K+SILERQL+   ISVITKDNVE+ L A  F+RV+DPA+SVYRI DID A++TT  SIVRS GG+++ DE+QS R  ++ +I ++L  A  +WGIEITRTEI DV VD AT+ A +QQLNAER+RRAAV
Sbjct:   23 KIVPQSEEYVVERFGKFSRKLPAGINFIVPFLDRIAHKISILERQLDEFSISVITKDNVEVVLEATNFYRVVDPARSVYRIRDIDKAIQTTAESIVRSAGGKLDLDELQSSRSEMNAEILSNLRLAAEVWGIEITRTEITDVRVDEATKEAQRQQLNAERQRRAAV 188          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A2E7W4Q6_9PROT (Paraslipin n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7W4Q6_9PROT)

HSP 1 Score: 201 bits (510), Expect = 2.360e-61
Identity = 102/168 (60.71%), Postives = 134/168 (79.76%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAVTK 504
            KIVPQS+ YV+E+FGKYTKTLP GL+ I+P L+RVA++V ILERQL+   ISVIT+DNVE+ L   VFFRV+D AKS+YRITDID+A++TT  S+VRS GG++  D +QS R+ ++ +I+  LSEA  +WGI++TRTE+ DV VD  T+ + +QQLNAERERRA V K
Sbjct:   24 KIVPQSRTYVIERFGKYTKTLPAGLHIIVPYLDRVAARVDILERQLDEFPISVITEDNVEVGLKTVVFFRVVDAAKSIYRITDIDSALETTAKSVVRSAGGKLSLDNLQSSRDSMNTEIETKLSEAAKVWGIDVTRTEVTDVLVDDKTKESQRQQLNAERERRATVAK 191          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A2D9HZ05_9PROT (Paraslipin n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9HZ05_9PROT)

HSP 1 Score: 197 bits (501), Expect = 6.760e-60
Identity = 104/166 (62.65%), Postives = 130/166 (78.31%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAV 498
            K+V QS+ YVVE+FGKYTKTLP GLNFI+P L+RVA +VSILERQL    ISVIT+DNVE+ L A VF+R+ D A SVYRI DI+ A+ T  TSIVRS  G++E D++QS RE ++E+I  +L +A  +WGIEITRTEI DV VD  T+ A +QQLNAER+RRAA+
Sbjct:   34 KVVSQSEVYVVERFGKYTKTLPAGLNFIVPFLDRVAHRVSILERQLPEFDISVITRDNVEVRLEATVFYRITDAAASVYRIRDINQAIYTAATSIVRSAAGKLELDDLQSSRESMNEEIARNLQQAAEVWGIEITRTEITDVIVDEQTKDAQRQQLNAERQRRAAI 199          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A1X1QSD2_9GAMM (PHB domain-containing protein n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. N TaxID=1840472 RepID=A0A1X1QSD2_9GAMM)

HSP 1 Score: 195 bits (496), Expect = 1.530e-59
Identity = 101/166 (60.84%), Postives = 130/166 (78.31%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAV 498
            K+VPQS+ Y+VE+FGKYTKTL  GLNFI P+ +RVA K+SILERQL  +   VIT+DNV I +T  +FF++ID AK+ YRI ++++A+   VT  VRS  G +EFDEVQS R+ I++KI++SL E CA WG++ITRTEILDV VD  T+ AMQQQ+NAERERRA V
Sbjct:   21 KVVPQSENYIVERFGKYTKTLKAGLNFITPLFDRVARKLSILERQLPEKPHDVITRDNVTIVITNTIFFKIIDAAKATYRIQNLESAINNAVTGTVRSIVGSIEFDEVQSHRDEINKKIKSSLEETCADWGVDITRTEILDVDVDENTKKAMQQQINAERERRATV 186          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A2E7I179_9PROT (Paraslipin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E7I179_9PROT)

HSP 1 Score: 195 bits (496), Expect = 2.230e-59
Identity = 103/168 (61.31%), Postives = 129/168 (76.79%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAVTK 504
            K+VPQS  +V+E+FGKYT+TLP GLNFIIP L +VA ++SILERQL   +ISVITKDNVE+ L A VFFRV+D A SVYRI  I+ A+ T  TSIVRS  G++E DE+QS RE ++++I  +L  A  IWGIEITRTEI DV +D  T+ A +QQLNAERERRA + +
Sbjct:   19 KVVPQSDVFVIERFGKYTRTLPAGLNFIIPFLEKVAHRISILERQLSEFEISVITKDNVEVRLEATVFFRVVDAAASVYRIRAINKAIHTASTSIVRSAAGRLELDELQSSRESMNQEIAENLQNAAEIWGIEITRTEITDVIIDEETKIAQRQQLNAERERRAVIAR 186          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: A0A7Y0DWR7_9PROT (SPFH/Band 7/PHB domain protein n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DWR7_9PROT)

HSP 1 Score: 195 bits (496), Expect = 3.150e-59
Identity = 102/166 (61.45%), Postives = 130/166 (78.31%), Query Frame = 1
Query:    1 KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAV 498
            KIV QS+ YV+E+FGKYTKTLP GL+FI+P L+RVA +VS+LERQL   +ISVIT+DNVE+ L A VF+R+ D A SVYRI +ID A+ T  TSIVRS  G++E D++QS RE ++E+I  +L +A  +WGIEITRTEI DV VD  T+ A +QQLNAER RRAA+
Sbjct:   27 KIVSQSEVYVIERFGKYTKTLPAGLSFIVPFLDRVAHRVSVLERQLPEFEISVITRDNVEVRLEATVFYRITDAASSVYRIRNIDQAIYTAATSIVRSAAGKLELDDLQSSRESMNEEIARNLQQAAEVWGIEITRTEITDVIVDEQTKDAQRQQLNAERSRRAAI 192          
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Match: UPI0012BD07FF (SPFH/Band 7/PHB domain protein n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BD07FF)

HSP 1 Score: 195 bits (496), Expect = 3.520e-59
Identity = 103/167 (61.68%), Postives = 130/167 (77.84%), Query Frame = 1
Query:    4 IVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTGGQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRSAMQQQLNAERERRAAVTK 504
            +VPQS+ YV+E+FGKYT+TL  GL+FI+P L+ VA KVSILERQL    ISVIT+DNVE+ L A VFFR++D A SVYRI DI+ A+ T  TSIVRS  G++E DE+QS RE ++ +I  +L EA  IWGIEITRTEI DV VD  T++A +QQLNAERERRA++ +
Sbjct:   34 VVPQSRNYVIERFGKYTQTLSAGLHFIVPFLDNVAFKVSILERQLPEFNISVITRDNVEVQLEATVFFRIVDTAASVYRIADINQAIFTAATSIVRSAAGKLELDELQSSRESMNSEIATNLQEAAEIWGIEITRTEITDVIVDEQTKAAQRQQLNAERERRASIAR 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58320.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TXC0_9PROT1.910e-9388.69Paraslipin n=1 Tax=Alphaproteobacteria bacterium T... [more]
A0A2D7FLI8_9PROT1.960e-6263.69Paraslipin n=1 Tax=Rhodospirillaceae bacterium Tax... [more]
A0A7Z9K8R5_9PROT3.110e-6263.10SPFH/Band 7/PHB domain protein n=2 Tax=Rhodospiril... [more]
A0A2E4IK73_9GAMM4.660e-6263.25Paraslipin n=1 Tax=Acidiferrobacteraceae bacterium... [more]
A0A2E7W4Q6_9PROT2.360e-6160.71Paraslipin n=1 Tax=Rhodospirillaceae bacterium Tax... [more]
A0A2D9HZ05_9PROT6.760e-6062.65Paraslipin n=3 Tax=Rhodospirillales TaxID=204441 R... [more]
A0A1X1QSD2_9GAMM1.530e-5960.84PHB domain-containing protein n=1 Tax=Cycloclastic... [more]
A0A2E7I179_9PROT2.230e-5961.31Paraslipin n=1 Tax=Alphaproteobacteria bacterium T... [more]
A0A7Y0DWR7_9PROT3.150e-5961.45SPFH/Band 7/PHB domain protein n=1 Tax=Pacificispi... [more]
UPI0012BD07FF3.520e-5961.68SPFH/Band 7/PHB domain protein n=1 Tax=Curvivirga ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58320contigP-wetherbeei_contig58320:2..505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog488538.SAR116_2004
Preferred nameqmcA
PFAMsBand_7,Band_7_C
Model size504
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
Exons1
Evalue1.88e-57
EggNOG OGsCOG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,2TRUY@28211|Alphaproteobacteria,4BPFE@82117|unclassified Alphaproteobacteria
Descriptionprohibitin homologues
Cds size504
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186864.194256-CDS-P-wetherbeei_contig58320:1..5051683186864.194256-CDS-P-wetherbeei_contig58320:1..505Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58320 2..505 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58320.1.1prot_P-wetherbeei_contig58320.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58320 2..505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58320.1.1

>prot_P-wetherbeei_contig58320.1.1 ID=prot_P-wetherbeei_contig58320.1.1|Name=mRNA_P-wetherbeei_contig58320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
KIVPQSQEYVVEQFGKYTKTLPPGLNFIIPILNRVASKVSILERQLEPQQ
ISVITKDNVEIHLTAAVFFRVIDPAKSVYRITDIDAAVKTTVTSIVRSTG
GQMEFDEVQSKREFISEKIQASLSEACAIWGIEITRTEILDVSVDAATRS
AMQQQLNAERERRAAVTK
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mRNA from alignment at P-wetherbeei_contig58320:2..505-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58320.1.1 ID=mRNA_P-wetherbeei_contig58320.1.1|Name=mRNA_P-wetherbeei_contig58320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig58320:2..505- (Phaeothamnion wetherbeei SAG_119_79)
AAAATCGTACCGCAATCCCAGGAATATGTCGTCGAGCAATTTGGCAAATA CACCAAAACGCTGCCGCCCGGCCTGAATTTCATTATCCCGATTCTGAACC GTGTGGCGAGTAAGGTCAGCATTCTGGAGCGCCAGTTAGAGCCGCAACAG ATCAGCGTCATCACCAAGGATAATGTCGAAATCCATCTGACGGCAGCGGT ATTTTTTCGCGTCATTGATCCCGCAAAATCGGTGTACCGGATTACCGACA TTGATGCGGCGGTAAAAACCACCGTGACCAGCATTGTGCGCTCGACCGGC GGCCAGATGGAATTTGACGAGGTGCAATCGAAACGCGAATTTATCAGCGA AAAAATCCAGGCCTCGCTGTCCGAAGCGTGCGCGATCTGGGGTATCGAAA TCACCCGCACGGAGATTCTCGATGTCTCGGTGGACGCCGCCACCCGCAGC GCCATGCAACAACAGCTTAATGCCGAACGTGAGCGTCGCGCCGCCGTCAC CAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58320:2..505-

>mRNA_P-wetherbeei_contig58320.1.1 ID=mRNA_P-wetherbeei_contig58320.1.1|Name=mRNA_P-wetherbeei_contig58320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig58320:2..505- (Phaeothamnion wetherbeei SAG_119_79)
AAAATCGTACCGCAATCCCAGGAATATGTCGTCGAGCAATTTGGCAAATA
CACCAAAACGCTGCCGCCCGGCCTGAATTTCATTATCCCGATTCTGAACC
GTGTGGCGAGTAAGGTCAGCATTCTGGAGCGCCAGTTAGAGCCGCAACAG
ATCAGCGTCATCACCAAGGATAATGTCGAAATCCATCTGACGGCAGCGGT
ATTTTTTCGCGTCATTGATCCCGCAAAATCGGTGTACCGGATTACCGACA
TTGATGCGGCGGTAAAAACCACCGTGACCAGCATTGTGCGCTCGACCGGC
GGCCAGATGGAATTTGACGAGGTGCAATCGAAACGCGAATTTATCAGCGA
AAAAATCCAGGCCTCGCTGTCCGAAGCGTGCGCGATCTGGGGTATCGAAA
TCACCCGCACGGAGATTCTCGATGTCTCGGTGGACGCCGCCACCCGCAGC
GCCATGCAACAACAGCTTAATGCCGAACGTGAGCGTCGCGCCGCCGTCAC
CAAG
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