mRNA_P-wetherbeei_contig58312.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58312.1.1
Unique NamemRNA_P-wetherbeei_contig58312.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A5J6MI01_9PROT (DNA-3-methyladenine glycosylase I n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MI01_9PROT)

HSP 1 Score: 249 bits (637), Expect = 1.950e-82
Identity = 117/165 (70.91%), Postives = 137/165 (83.03%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            MS+YCD+APGH +HGPYHE  YGFP AD+  LFERL+LEINQAGLSWLTILK+++AF+ A+ DF +D VA   ARD  RL++DA IIRNR+KIEA IENAKRI+AL+  H SFA WI AHHPLTK EWVK+FKKTF FTGGEIVGEFLMS+GYLPG+H   CP +
Sbjct:    1 MSSYCDIAPGHPFHGPYHESEYGFPNADESALFERLVLEINQAGLSWLTILKKREAFKAAYADFDVDRVAAFKARDKARLLKDAGIIRNRLKIEAAIENAKRIQALRESHGSFAQWIDAHHPLTKEEWVKVFKKTFRFTGGEIVGEFLMSLGYLPGAHQPDCPTY 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A5J6N1A4_9PROT (DNA-3-methyladenine glycosylase I n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6N1A4_9PROT)

HSP 1 Score: 246 bits (627), Expect = 6.490e-81
Identity = 115/165 (69.70%), Postives = 136/165 (82.42%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            MS+YCDVAPGH +HGPYHE  YGFP  D+  LFERL+LEINQAGLSWLTILK+++AF+ A+  F +D VA   ARD  RL++DA IIRNR+KIEA IENA+RI+AL+  H SFA W+ AHHPL+K EWVKLFKKTF FTGGEIVGEFLMS+GYLPG+H   CP+H
Sbjct:    1 MSSYCDVAPGHPFHGPYHESEYGFPSKDETILFERLVLEINQAGLSWLTILKKREAFKAAYAGFDVDRVAAFKARDKARLLKDAGIIRNRLKIEAAIENAQRIQALRESHGSFAGWLDAHHPLSKEEWVKLFKKTFRFTGGEIVGEFLMSLGYLPGAHRDDCPVH 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A7Y4VWP0_9BACT (DNA-3-methyladenine glycosylase I n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7Y4VWP0_9BACT)

HSP 1 Score: 244 bits (622), Expect = 3.620e-80
Identity = 115/165 (69.70%), Postives = 132/165 (80.00%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            MS YCDVAPGHEWHGPYH+  YGFP+  DD+LFERLILEINQAGLSWLTILK++ AFR A+  F +  VAR  ARDV RL+ DA IIRNR+K+EA I NAK + AL+  H SFAAW+ AHHP +K EWVKLFKKTF FTGGEIVGEFLMS GYL G+H   CP++
Sbjct:    1 MSGYCDVAPGHEWHGPYHDTEYGFPLRSDDELFERLILEINQAGLSWLTILKKRAAFRAAYHGFEVGRVARYGARDVRRLLGDAGIIRNRLKVEAAIANAKTVLALRASHGSFAAWLDAHHPRSKEEWVKLFKKTFRFTGGEIVGEFLMSTGYLSGAHRESCPVY 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A7V7G1M5_9GAMM (DNA-3-methyladenine glycosylase I n=1 Tax=Halomonas pellis TaxID=2606936 RepID=A0A7V7G1M5_9GAMM)

HSP 1 Score: 239 bits (611), Expect = 1.710e-78
Identity = 110/165 (66.67%), Postives = 133/165 (80.61%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            M+ YCD+APGH +HGPYH+  YGFP+ DD++LFERL+LEINQAGLSWLT+LK++DAFR AF DFRI+ VA     D ERL+ DA IIRNR+K+EA I NA  I+ LQREH SF AW+  HHP ++AEWVKLF++TF FTG EIVGEFLMS GYLPG+H   CP+H
Sbjct:    1 MTHYCDIAPGHPYHGPYHDAEYGFPVEDDERLFERLVLEINQAGLSWLTVLKKRDAFRLAFEDFRIERVAGFDDTDRERLLNDAGIIRNRLKVEAVIHNAGVIQGLQREHGSFRAWLDLHHPRSRAEWVKLFRRTFRFTGPEIVGEFLMSTGYLPGAHRDDCPVH 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A5C7NQJ3_9PROT (DNA-3-methyladenine glycosylase I n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NQJ3_9PROT)

HSP 1 Score: 239 bits (611), Expect = 2.320e-78
Identity = 114/165 (69.09%), Postives = 132/165 (80.00%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            M+ YC  A GHEWH PYH  HYGFPIADDDQLFERLILEINQAGLSWLTILKRQ +F  A+ +F I  VA+   +D  RL+ D  IIRNR+K++A IENA+RI+ALQ+ H SF AW+AA HPL K +WVKLFKKTFVFTGGEIVGEFLMS GYLPG+H   CP++
Sbjct:    1 MTGYCHSALGHEWHEPYHNQHYGFPIADDDQLFERLILEINQAGLSWLTILKRQASFHAAYSNFAIAKVAKYGEKDRARLLADPGIIRNRLKVDAAIENARRIQALQKSHGSFQAWLAAQHPLRKTDWVKLFKKTFVFTGGEIVGEFLMSTGYLPGAHVEACPVY 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A850KIN4_9HYPH (DNA-3-methyladenine glycosylase I n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A850KIN4_9HYPH)

HSP 1 Score: 238 bits (608), Expect = 6.200e-78
Identity = 113/165 (68.48%), Postives = 135/165 (81.82%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            M+ YCDVAPGHE+HGPYHE  YGFPIADD++LFERL LEI QAGLSWLTILK++D F KAF  F +D+VA    +D+ RL++D+ IIRN++KI A I NAK I++LQ+++DSFA WIA HHP  K+EWVKLFKKTF FTGGEI GEFLMSIGYLPG H   CPI+
Sbjct:    1 MTWYCDVAPGHEFHGPYHENEYGFPIADDNKLFERLCLEIMQAGLSWLTILKKKDNFIKAFDQFHLDTVAAYGEKDIARLLEDSGIIRNKLKINAIIHNAKIIQSLQKDYDSFANWIAHHHPKPKSEWVKLFKKTFKFTGGEITGEFLMSIGYLPGVHREDCPIY 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A243T7F5_9GAMM (DNA-3-methyladenine glycosylase n=7 Tax=Halomonas TaxID=2745 RepID=A0A243T7F5_9GAMM)

HSP 1 Score: 237 bits (605), Expect = 1.720e-77
Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            MS YCD+APGH WHGPYHE  YGFP+ DD  LFERL+LEINQAGLSWLT+LK+++AFR+AF +F I  VA   + + ERL+ DA IIRNR+K+EA I NA  I AL+  H SFAAW+  HHPLTKAEWVKLF++TF FTG EIVGEFLMS GYLPG+HH  CP+H
Sbjct:    1 MSHYCDLAPGHPWHGPYHEKEYGFPVRDDTALFERLVLEINQAGLSWLTVLKKREAFRRAFDNFDIAKVAAYGSGERERLLGDAGIIRNRLKVEAAIHNAGVILALRDTHGSFAAWLDHHHPLTKAEWVKLFRRTFRFTGPEIVGEFLMSTGYLPGAHHVECPVH 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A2V7W4U3_9BACT (DNA-3-methyladenine glycosylase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7W4U3_9BACT)

HSP 1 Score: 236 bits (603), Expect = 2.930e-77
Identity = 109/163 (66.87%), Postives = 135/163 (82.82%), Query Frame = 1
Query:    7 TYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            +YCD+APGH +HGPYH+  YGFPI +DD+LFERL+LEINQAGLSWLTIL++++AF KAF  F+++ VAR  AR   RL+ D  IIRNR+K++A IENAKRI AL++   SFAAW+ AHHP+TK EWVKLFKKTFVFTGGEI GEFL+S GYLPG+H   CP++
Sbjct:    2 SYCDIAPGHPFHGPYHDTEYGFPIREDDRLFERLVLEINQAGLSWLTILRKREAFSKAFDAFKLERVARYDARRRTRLLNDEGIIRNRLKVDAAIENAKRILALRKTDGSFAAWLDAHHPMTKDEWVKLFKKTFVFTGGEITGEFLLSTGYLPGAHEEKCPVY 164          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: UPI0015D48BE5 (DNA-3-methyladenine glycosylase I n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D48BE5)

HSP 1 Score: 238 bits (606), Expect = 3.060e-77
Identity = 110/163 (67.48%), Postives = 130/163 (79.75%), Query Frame = 1
Query:    4 STYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPI 492
            STYC+ APGH +HGPYHE  YGFP  D+  LFERL+LEINQAGLSWLT+LK++DAFR AF  F +D VA     DV RL+ DA I+RNR+K+EA I NA+RI+ ++  H SFAAW+ AHHP TK EWVKLFK TF FTGGEIVGEFLMS+GYLPG+HH GCP+
Sbjct:    3 STYCEAAPGHSFHGPYHETEYGFPSDDESVLFERLVLEINQAGLSWLTVLKKRDAFRAAFSGFDVDRVAAFGPDDVARLLADAGIVRNRLKVEAAIANARRIQEMRASHGSFAAWLRAHHPRTKPEWVKLFKGTFRFTGGEIVGEFLMSLGYLPGAHHPGCPV 165          
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Match: A0A2N6FG68_9DELT (DNA-3-methyladenine glycosylase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6FG68_9DELT)

HSP 1 Score: 236 bits (601), Expect = 6.740e-77
Identity = 112/165 (67.88%), Postives = 130/165 (78.79%), Query Frame = 1
Query:    1 MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTILKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENAKRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMSIGYLPGSHHAGCPIH 495
            MS+YCDVAPGH WHGPYH+  YGFP+ DD+QLFERL+LEINQAGLSWLTILK+++ FR+AF DF I  VA    RD +RL+ DA IIRNR+KI+A I NA  + ALQRE  SFAAW+  HHP  K  WV LFKKTF FTGGEI GEFLMS GYLPG+HH  CP++
Sbjct:    1 MSSYCDVAPGHPWHGPYHDLEYGFPLRDDNQLFERLVLEINQAGLSWLTILKKKENFRRAFHDFDIARVAAYGERDRQRLLADAGIIRNRLKIDAAIANANTLLALQREFGSFAAWLDHHHPRPKQAWVHLFKKTFRFTGGEITGEFLMSSGYLPGAHHPECPVY 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58312.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6MI01_9PROT1.950e-8270.91DNA-3-methyladenine glycosylase I n=1 Tax=Hyperici... [more]
A0A5J6N1A4_9PROT6.490e-8169.70DNA-3-methyladenine glycosylase I n=1 Tax=Hyperici... [more]
A0A7Y4VWP0_9BACT3.620e-8069.70DNA-3-methyladenine glycosylase I n=1 Tax=Gemmatim... [more]
A0A7V7G1M5_9GAMM1.710e-7866.67DNA-3-methyladenine glycosylase I n=1 Tax=Halomona... [more]
A0A5C7NQJ3_9PROT2.320e-7869.09DNA-3-methyladenine glycosylase I n=1 Tax=Rhodospi... [more]
A0A850KIN4_9HYPH6.200e-7868.48DNA-3-methyladenine glycosylase I n=1 Tax=Methyloc... [more]
A0A243T7F5_9GAMM1.720e-7767.88DNA-3-methyladenine glycosylase n=7 Tax=Halomonas ... [more]
A0A2V7W4U3_9BACT2.930e-7766.87DNA-3-methyladenine glycosylase n=1 Tax=Acidobacte... [more]
UPI0015D48BE53.060e-7767.48DNA-3-methyladenine glycosylase I n=1 Tax=Azospiri... [more]
A0A2N6FG68_9DELT6.740e-7767.88DNA-3-methyladenine glycosylase n=1 Tax=Desulfurom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58312contigP-wetherbeei_contig58312:12..506 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1380391.JIAS01000003_gene1835
PFAMsAdenine_glyco
Model size495
Max annot lvl204441|Rhodospirillales
KEGG koko:K01246
KEGG Pathwayko03410,map03410
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.17e-89
EggNOG OGsCOG2818@1|root,COG2818@2|Bacteria,1R9X5@1224|Proteobacteria,2TUP5@28211|Alphaproteobacteria,2JQMB@204441|Rhodospirillales
EC3.2.2.20
DescriptionCOG2818 3-methyladenine DNA glycosylase
Cds size495
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186864.0528378-CDS-P-wetherbeei_contig58312:11..5061683186864.0528378-CDS-P-wetherbeei_contig58312:11..506Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58312 12..506 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58312.1.1prot_P-wetherbeei_contig58312.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58312 12..506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58312.1.1

>prot_P-wetherbeei_contig58312.1.1 ID=prot_P-wetherbeei_contig58312.1.1|Name=mRNA_P-wetherbeei_contig58312.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
MSTYCDVAPGHEWHGPYHEGHYGFPIADDDQLFERLILEINQAGLSWLTI
LKRQDAFRKAFRDFRIDSVARMTARDVERLMQDASIIRNRMKIEATIENA
KRIRALQREHDSFAAWIAAHHPLTKAEWVKLFKKTFVFTGGEIVGEFLMS
IGYLPGSHHAGCPIH
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mRNA from alignment at P-wetherbeei_contig58312:12..506+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58312.1.1 ID=mRNA_P-wetherbeei_contig58312.1.1|Name=mRNA_P-wetherbeei_contig58312.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig58312:12..506+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCACCTATTGCGACGTCGCCCCCGGCCACGAATGGCATGGCCCCTA TCATGAAGGCCACTACGGATTCCCGATCGCGGATGACGACCAGCTGTTCG AGCGCCTGATCCTGGAGATCAATCAGGCGGGCTTGAGCTGGCTCACCATC CTCAAGCGGCAGGACGCCTTCCGGAAGGCGTTCCGCGATTTCAGGATCGA CAGCGTGGCGCGGATGACCGCCCGCGACGTCGAGCGCCTGATGCAGGATG CCTCGATCATCCGCAACCGGATGAAGATCGAAGCGACGATTGAGAATGCC AAACGCATCCGCGCGCTCCAGCGCGAGCACGATTCATTCGCCGCCTGGAT CGCCGCCCATCATCCCCTCACCAAGGCGGAGTGGGTGAAGCTGTTCAAAA AGACATTTGTCTTCACCGGCGGCGAGATCGTCGGGGAGTTCCTGATGAGC ATCGGCTACCTGCCCGGCTCGCATCACGCAGGCTGCCCGATCCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58312:12..506+

>mRNA_P-wetherbeei_contig58312.1.1 ID=mRNA_P-wetherbeei_contig58312.1.1|Name=mRNA_P-wetherbeei_contig58312.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig58312:12..506+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCACCTATTGCGACGTCGCCCCCGGCCACGAATGGCATGGCCCCTA
TCATGAAGGCCACTACGGATTCCCGATCGCGGATGACGACCAGCTGTTCG
AGCGCCTGATCCTGGAGATCAATCAGGCGGGCTTGAGCTGGCTCACCATC
CTCAAGCGGCAGGACGCCTTCCGGAAGGCGTTCCGCGATTTCAGGATCGA
CAGCGTGGCGCGGATGACCGCCCGCGACGTCGAGCGCCTGATGCAGGATG
CCTCGATCATCCGCAACCGGATGAAGATCGAAGCGACGATTGAGAATGCC
AAACGCATCCGCGCGCTCCAGCGCGAGCACGATTCATTCGCCGCCTGGAT
CGCCGCCCATCATCCCCTCACCAAGGCGGAGTGGGTGAAGCTGTTCAAAA
AGACATTTGTCTTCACCGGCGGCGAGATCGTCGGGGAGTTCCTGATGAGC
ATCGGCTACCTGCCCGGCTCGCATCACGCAGGCTGCCCGATCCAC
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