mRNA_P-wetherbeei_contig583.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig583.1.1
Unique NamemRNA_P-wetherbeei_contig583.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 2.480e-99
Identity = 177/303 (58.42%), Postives = 218/303 (71.95%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAK-GACGDPWPF--QKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL-------PQDDAGGFVALI--TEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPII+++Q  +VGD I  VMGIMNGTTNFMLTKME EGADY+AVL EAQ LG+AEADPTADVEGHDVQAKIALLAKLAFGQDVA+  VPCAGIS LS+ DFA AK +GCT+KL+GTA   +GE       D+LAVFVSP +VPL G LA+TRGPGN+VV++++N+ ES Y GPGAGRYPTANSVV+DI+R+A+ GA G P PF  ++  +++ D+ A FY+R     G G   AV A A  AGV+V +VL          +  G V+L+  T+ C  S V A    L GK    A+P+VM +
Sbjct:  138 GIPIIHNMQGSYVGDSIQSVMGIMNGTTNFMLTKMETEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKLAFGQDVALDKVPCAGISNLSSTDFACAKMMGCTIKLVGTA--ALGESK-----DKLAVFVSPVLVPLGGPLASTRGPGNVVVVRSENLTESVYAGPGAGRYPTANSVVNDIVRLARLGAAGTPPPFPLERPLELEPDFEACFYVRVTAADGLGVLSAVGAIASEAGVSVHSVLRGGEGXXXXXEEAGVVSLVVKTDSCLRSQVGAFVDGLKGKKVATADPVVMSI 433          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A835ZAD6_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD6_9STRA)

HSP 1 Score: 275 bits (704), Expect = 4.850e-87
Identity = 155/294 (52.72%), Postives = 198/294 (67.35%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGGFVALIT-EVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPIIN LQ DF GD ISK+ GIMNGTTNFML+KME EGADY  VL EAQALGYAEADPTADVEG DVQAKIALLAKLAFG  V V  VPC GIS+LS+ DF  A+ +  T+KLLGTAM           G +L+VFVSP +VPL   +A  RG GNIVV+ ++N+  ++Y+GPGAGR+PTANSVVSDI+R+A+G    P+P+ K+W  ++D++  FY R       G    V   A+  GV++  +L  P +D      ++T E C+ S V++ C ++  +     +PL M L
Sbjct:  142 GIPIINVLQNDFFGDKISKICGIMNGTTNFMLSKMESEGADYDDVLKEAQALGYAEADPTADVEGLDVQAKIALLAKLAFGATVPVDTVPCQGISQLSSADFEFARMMRSTIKLLGTAML-------NADGSKLSVFVSPVVVPLTSPIAGARGAGNIVVVNSRNVDTTSYSGPGAGRFPTANSVVSDIVRIARGMATPPFPYDKDWTFETDFTGEFYTRITCKDALGIIKRVGELAEENGVSIHAILQNPIEDRDNVDFVVTTEPCRLSQVESFCSSIAKERWAKNKPLCMSL 428          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 1.170e-85
Identity = 154/294 (52.38%), Postives = 198/294 (67.35%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGGFVALIT-EVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPII +LQ D++GD I KV GIMNGTTNFML+KME EGADY  VL EAQ LGYAEADPTADVEG DVQAKIALL KLAFG  V    + C GIS L++VDF  AK +  T+KLLGTAMR          G++L+VFVSP +VPL   +A+ RG GNIV + +KNMG ++++GPGAGRYPTANSVV+DI+R+  G  G P+PF KEW+++SD+++ FYLR       G    V   A   GV++  +L  P +D      ++T + CK S V  +  ++G +      PL++ L
Sbjct:  206 GIPIIATLQNDYLGDKILKVCGIMNGTTNFMLSKMESEGADYGEVLKEAQDLGYAEADPTADVEGFDVQAKIALLTKLAFGATVPSDLIQCKGISSLTSVDFEYAKMMKSTIKLLGTAMR-------SPDGEKLSVFVSPVLVPLSHPIASARGAGNIVSVDSKNMGTASFSGPGAGRYPTANSVVNDIVRLGTGKVGSPFPFDKEWELESDFTSAFYLRITCSDDLGIIQRVGELAAENGVSIHAILQNPIEDVDNVDFVVTTDPCKQSQVDELSSSIGQEKWAKGVPLILTL 492          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A7S2WAR1_9STRA (Homoserine dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAR1_9STRA)

HSP 1 Score: 270 bits (689), Expect = 6.750e-85
Identity = 156/294 (53.06%), Postives = 198/294 (67.35%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQ---DDAGGFVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPIIN+LQQ  V D+IS+VMGIMNGTTNFML+KME EGA YS VLAEAQALGYAEADPTADVEG DVQAKIAL+ KLAFG  V  A +P AGIS++ AVDF  AK +  TVKLLGTA     +       + L+V+VSP +VP +  +A+ RG  N+V + + N+G S+Y GPGAGR+PTANSVVSD+LR+A      P+P Q+   ++ DYSA FY+R  V    G    + A A  AGV++ +VL     D A     + T+ CK S VQA+   +  ++   + PLVMP+
Sbjct:  130 GIPIINTLQQGLVSDEISEVMGIMNGTTNFMLSKMEGEGAAYSDVLAEAQALGYAEADPTADVEGFDVQAKIALITKLAFGVTVDPASIPTAGISKIDAVDFEYAKLMNATVKLLGTARLSPSK-------ESLSVYVSPVVVPQLHPVASARGATNVVSVASSNLGSSSYVGPGAGRFPTANSVVSDVLRVAMDTTTPPFPLQRTLPLEPDYSACFYVRITVKDQLGIIANIGAIAAKAGVSIFSVLQNPITDPAKVDFVVTTDQCKRSQVQAVADEVSAQLFTVSPPLVMPM 416          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A835YR06_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR06_9STRA)

HSP 1 Score: 268 bits (685), Expect = 9.910e-85
Identity = 143/225 (63.56%), Postives = 172/225 (76.44%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAK--LAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGD---PWPFQKEWQMDSDYSARFYLR 660
            GIPII +LQQD+VGD I+KV+GIMNGTTNFMLTKME EGADY+AVL EAQ LG+AEADPTADVEGHDVQAKIALLAK  LAFGQ V ++ VPCAGIS L+A DFA AK++ CT+KLLGTA     + +     D L V+VSP + PL    AA RGPGN+VV+ ++N+ ES Y GPGAGRYPTANSVVSD+ R+A G C     P P +    + +D++ARFY+R
Sbjct:  138 GIPIIAALQQDYVGDSITKVVGIMNGTTNFMLTKMEQEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKANLAFGQTVPLSSVPCAGISALTAADFAFAKSINCTIKLLGTAATASSDPA-----DPLTVYVSPALAPLDSPFAAARGPGNVVVVSSENLTESQYAGPGAGRYPTANSVVSDVARLAHGTCAAAPFPQPPRAPRALAADFAARFYVR 357          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A7S1Z3Y2_TRICV (Homoserine dehydrogenase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3Y2_TRICV)

HSP 1 Score: 266 bits (679), Expect = 1.050e-84
Identity = 156/298 (52.35%), Postives = 203/298 (68.12%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRV--IGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACG-DPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGG--FVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPIIN+LQ  + GD + +VMGI NGTTN+ML KME  GADYS VL EAQ LGYAEADPTADVEGHDV+AKIA+LAKLAFG  V V  +PC GI+ ++AVDF  A+ LGCTVKL+GTA R+   GE  G      L+V+V+P +VP    LA+ RG GN V + + N+G ++YTGPGAGRYPTA+SVV+D+ R+A G C  DP+P +   ++D+DY++ FY+R +     G    V   A+  GV++ ++L  P DD G   FV + TE CK S V  MC+ + G+      PL MP+
Sbjct:   21 GIPIINALQSCYAGDVVHEVMGICNGTTNYMLGKMET-GADYSDVLREAQDLGYAEADPTADVEGHDVRAKIAILAKLAFGTTVPVESIPCMGITGVTAVDFEYARLLGCTVKLVGTAARLSKYGERDGA-----LSVYVAPKVVPNSHLLASARGCGNAVAVDSANLGVASYTGPGAGRYPTASSVVADVRRIADGLCPPDPFPLESSIELDNDYTSNFYVRISFADSLGIVRRVGEIAERRGVSIHSILQNPIDDRGAADFV-VTTEACKLSQVTGMCEDVAGEDFARGPPLCMPM 311          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A7S2KEY7_9STRA (Homoserine dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEY7_9STRA)

HSP 1 Score: 265 bits (678), Expect = 5.090e-83
Identity = 153/299 (51.17%), Postives = 204/299 (68.23%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRV--IGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPF---QKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQDDAGGFVA---LITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPIIN+LQ  + GD I++VMGI NGTTN+ML KME EGA+Y  VL EAQ LGYAEADPTADVEGHDV+AKIA+LAKLAFGQ V V  +PC+GI+++S+VDF  AK LGCT+KL+GTA R+   GE  G      L+V+V+P +VP+   LA+ RG GN V + + N+G ++YTGPGAGRYPTA+SVV+DI R+A G+C  P+P        ++D+DY++ FY+R +   G G   +V   A+A GV++ +VL         A   + TE CK S V ++C  +  +      PL MP+
Sbjct:  136 GIPIINTLQTCYTGDIINEVMGICNGTTNYMLGKME-EGAEYDEVLKEAQDLGYAEADPTADVEGHDVRAKIAILAKLAFGQTVPVDTIPCSGITQISSVDFEYAKLLGCTIKLVGTAARLSEYGEHDGA-----LSVYVTPKIVPMTHLLASARGSGNAVAVNSSNLGTASYTGPGAGRYPTASSVVADICRVADGSCSAPFPSVTSTSSIEIDNDYTSAFYIRISFQDGLGIIRSVGELAEAHGVSINSVLQNPIRNRMEADFVVTTESCKLSQVVSLCDDIAKQEYCRMPPLSMPI 428          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: B8C6V8_THAPS (Homoserine dehydrogenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6V8_THAPS)

HSP 1 Score: 257 bits (656), Expect = 8.880e-80
Identity = 143/295 (48.47%), Postives = 201/295 (68.14%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACG-DPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQ---DDAGGFVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
            GIPII++LQ  + GD I++VMGI NGTTN+ML KME +G DY  VL EAQ LGYAEADPTADVEGHDV+AKIA+LAKLAFG  VAV  +PC GI+ +S VDF+ AK++GCT+KL+GTA R   +   G+    L+V+VSP +VP    LA+  G GN V + + N+G ++Y+GPGAGRY TANSVV+DI+R+A   C  +P+P     ++D+DY + FY+R +   G G   +V   A++  V++ ++L Q   D       + TE C++S V+A+C+ +  +    + P+ MP+
Sbjct:  139 GIPIIHTLQSCYKGDIINEVMGICNGTTNYMLGKME-DGCDYDEVLKEAQDLGYAEADPTADVEGHDVRAKIAILAKLAFGTTVAVDSIPCMGITDISVVDFSYAKSMGCTIKLVGTAAR---QSEFGEHDGALSVYVSPKIVPNNHLLASATGCGNAVAVDSANLGTASYSGPGAGRYATANSVVADIMRIANSTCASNPFPLSSNIEIDNDYVSPFYIRISFSDGLGIIKSVGELAESQEVSIHSILQQPITDRMNADTVVTTEACRYSQVKALCELIEEEDFALSPPVFMPM 429          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK)

HSP 1 Score: 252 bits (644), Expect = 3.270e-77
Identity = 131/223 (58.74%), Postives = 166/223 (74.44%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAV 669
            GIPII++LQ D++GD I K++GIMNGTTNFMLTKME EGADY+AVLAEAQALGYAEADPTADVEGHDVQAKIAL+AKLAFG  V V  +PC GIS + ++DF  AK +G T+KL G A     EG       +L+V+VSP +VP    LA+ R   NIV + + NMG ++Y GPGAGRYPTANSVV+D++R A+G  G  +P   E +++ DY ++FY+R  +
Sbjct:  213 GIPIIHTLQNDYLGDKIRKILGIMNGTTNFMLTKMESEGADYAAVLAEAQALGYAEADPTADVEGHDVQAKIALVAKLAFGVGVPVEAIPCKGISAIQSIDFQYAKQMGATIKLAGVA-DASREG-------QLSVYVSPVVVPRTHPLASARMATNIVEVTSDNMGSTSYVGPGAGRYPTANSVVNDVVRAARGLTGTAFPVDAEARIEGDYVSKFYVRIKI 427          
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: W7TUB9_9STRA (Homoserine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUB9_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.420e-76
Identity = 142/274 (51.82%), Postives = 185/274 (67.52%), Query Frame = 1
Query:    1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGGFVALIT-EVCKHSAVQA 813
            GIPII++LQ D++GD +S+++GIMNGTTNFMLTKME  GADY  VLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFG  V    +P  GIS +++VDF  A+ L  T+KLLG A            G +L+V VSP +VP    +A T G  NIV + ++N+  S+Y GPGAGRYPTANS+VSD++R+A+G  G P+P  +   ++ DY++RFY+R  +    G    V   A+  GV++  +L  P  D      ++T E  +HS VQA
Sbjct:  138 GIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKME-SGADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQL-------SPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQA 403          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG9_ECTSI2.480e-9958.42Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZAD6_9STRA4.850e-8752.72Homoserine dehydrogenase n=1 Tax=Tribonema minus T... [more]
D7FNL8_ECTSI1.170e-8552.38Homoserine dehydrogenase n=1 Tax=Ectocarpus silicu... [more]
A0A7S2WAR1_9STRA6.750e-8553.06Homoserine dehydrogenase n=1 Tax=Rhizochromulina m... [more]
A0A835YR06_9STRA9.910e-8563.56Homoserine dehydrogenase n=1 Tax=Tribonema minus T... [more]
A0A7S1Z3Y2_TRICV1.050e-8452.35Homoserine dehydrogenase (Fragment) n=1 Tax=Triere... [more]
A0A7S2KEY7_9STRA5.090e-8351.17Homoserine dehydrogenase n=1 Tax=Leptocylindrus da... [more]
B8C6V8_THAPS8.880e-8048.47Homoserine dehydrogenase n=1 Tax=Thalassiosira pse... [more]
A0A6V1RNX4_HETAK3.270e-7758.74Homoserine dehydrogenase n=3 Tax=Heterosigma akash... [more]
W7TUB9_9STRA1.420e-7651.82Homoserine dehydrogenase n=2 Tax=Monodopsidaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig583contigP-wetherbeei_contig583:157..1035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FNL8
PFAMsHomoserine_dh,NAD_binding_3
Model size879
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.92e-86
EggNOG OGsCOG0460@1|root,2QT5B@2759|Eukaryota
DescriptionHomoserine dehydrogenase
Cds size879
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186863.4761744-CDS-P-wetherbeei_contig583:156..10351683186863.4761744-CDS-P-wetherbeei_contig583:156..1035Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig583 157..1035 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig583.1.1prot_P-wetherbeei_contig583.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig583 157..1035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig583.1.1

>prot_P-wetherbeei_contig583.1.1 ID=prot_P-wetherbeei_contig583.1.1|Name=mRNA_P-wetherbeei_contig583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=293bp
GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQ
ALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAV
DFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALA
ATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDP
WPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQ
DDAGGFVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPLA*
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mRNA from alignment at P-wetherbeei_contig583:157..1035+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig583.1.1 ID=mRNA_P-wetherbeei_contig583.1.1|Name=mRNA_P-wetherbeei_contig583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig583:157..1035+ (Phaeothamnion wetherbeei SAG_119_79)
GGCATCCCCATCATCAACTCGCTGCAGCAGGATTTCGTGGGGGATGACAT CTCCAAGGTGATGGGCATCATGAACGGCACTACCAACTTCATGCTCACCA AGATGGAGCTCGAGGGCGCCGACTACTCCGCCGTCCTTGCCGAAGCGCAG GCCCTCGGCTACGCGGAGGCCGACCCCACCGCCGATGTGGAGGGGCACGA CGTGCAGGCCAAGATCGCGCTGCTGGCGAAGCTGGCATTCGGGCAGGATG TAGCGGTGGCGGGCGTGCCGTGTGCTGGCATCAGCCGGTTGTCAGCGGTC GACTTTGCGAACGCCAAGGCGCTTGGATGCACCGTCAAGCTGCTGGGCAC GGCGATGCGCGTCATAGGCGAAGGGAGCGGCGGGAAGGGGGGGGACCGGC TGGCGGTATTTGTTTCACCGACGATGGTGCCGCTGGTTGGGGCGCTGGCG GCGACGCGCGGGCCCGGCAATATTGTGGTGCTGCAGACCAAGAACATGGG GGAGAGCACCTACACGGGTCCGGGGGCCGGCCGTTACCCGACGGCCAACT CGGTGGTCAGCGACATTCTCCGCATGGCGAAAGGCGCCTGCGGCGACCCG TGGCCCTTCCAGAAAGAATGGCAGATGGACAGCGACTACAGTGCACGTTT CTACCTGCGATTTGCCGTCGACGGTGGCGGCGGCAGCGACGGCGCGGTAG AGGCGGCGGCGGACGCGGCAGGAGTGACCGTAGCGACAGTCCTCCCGCAG GATGACGCCGGAGGCTTCGTGGCACTGATCACGGAAGTATGCAAGCACTC CGCGGTGCAGGCCATGTGCAAAGCCCTCGGGGGGAAGGTGACTCTCGCTG CGGAGCCGCTGGTGATGCCGTTGGCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig583:157..1035+

>mRNA_P-wetherbeei_contig583.1.1 ID=mRNA_P-wetherbeei_contig583.1.1|Name=mRNA_P-wetherbeei_contig583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig583:157..1035+ (Phaeothamnion wetherbeei SAG_119_79)
GGCATCCCCATCATCAACTCGCTGCAGCAGGATTTCGTGGGGGATGACAT
CTCCAAGGTGATGGGCATCATGAACGGCACTACCAACTTCATGCTCACCA
AGATGGAGCTCGAGGGCGCCGACTACTCCGCCGTCCTTGCCGAAGCGCAG
GCCCTCGGCTACGCGGAGGCCGACCCCACCGCCGATGTGGAGGGGCACGA
CGTGCAGGCCAAGATCGCGCTGCTGGCGAAGCTGGCATTCGGGCAGGATG
TAGCGGTGGCGGGCGTGCCGTGTGCTGGCATCAGCCGGTTGTCAGCGGTC
GACTTTGCGAACGCCAAGGCGCTTGGATGCACCGTCAAGCTGCTGGGCAC
GGCGATGCGCGTCATAGGCGAAGGGAGCGGCGGGAAGGGGGGGGACCGGC
TGGCGGTATTTGTTTCACCGACGATGGTGCCGCTGGTTGGGGCGCTGGCG
GCGACGCGCGGGCCCGGCAATATTGTGGTGCTGCAGACCAAGAACATGGG
GGAGAGCACCTACACGGGTCCGGGGGCCGGCCGTTACCCGACGGCCAACT
CGGTGGTCAGCGACATTCTCCGCATGGCGAAAGGCGCCTGCGGCGACCCG
TGGCCCTTCCAGAAAGAATGGCAGATGGACAGCGACTACAGTGCACGTTT
CTACCTGCGATTTGCCGTCGACGGTGGCGGCGGCAGCGACGGCGCGGTAG
AGGCGGCGGCGGACGCGGCAGGAGTGACCGTAGCGACAGTCCTCCCGCAG
GATGACGCCGGAGGCTTCGTGGCACTGATCACGGAAGTATGCAAGCACTC
CGCGGTGCAGGCCATGTGCAAAGCCCTCGGGGGGAAGGTGACTCTCGCTG
CGGAGCCGCTGGTGATGCCGTTGGCATGA
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