mRNA_P-wetherbeei_contig5825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A835ZAI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI6_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.960e-43 Identity = 133/308 (43.18%), Postives = 168/308 (54.55%), Query Frame = 2
Query: 269 KVSLARSYGLCAQLECLDYARHPHWLLADLSREQARNPAAALNTGDCSYDGGSVGHGGGNRPDRRGSAASPASAAARAPVAAKDCATALRMAPQPPPPLQPPQWLEQMREVAHTLAVGHRRGVGGRVLPQFFLQDGLNGAALLLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRV 1192
+V+LARSYGL Q+ CLD RH HW+LAD+SRE+ + A +G+ + +R G +E M+EV L VG R GRVLP+FFL GLN +AL LR +WL PCPEA ++LLDWARA+P AGGV++VL A++ L GD TA+KL FAQQLVS Q XXXXXXXXXXXXXXX +A +T RNA + E+ R+ G +RVG++YG LHMRDLQ RL RG G ++ GVRW TAW +
Sbjct: 69 QVALARSYGLAPQMMCLDLRRHQHWVLADMSRERLQ--ALQRESGEAVWG------------ERLGI-------------------------------------VEHMQEVGKALVVG--RTADGRVLPKFFLTGGLNASALALRALMWLMPCPEAQVMLLDWARAWPAAGGVSAVLSAVIDRVLAGDIATAKKLAFAQQLVSGQRSGXXXXXXXXXXXXXXXXXXXXXXXXXSADVLMTG-------RNAEVMRELRRSRLAGLQRVGVMYGCLHMRDLQERL-RGELG----MDRVGVRWVTAWDI 311
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A6H5K168_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K168_9PHAE) HSP 1 Score: 172 bits (437), Expect = 4.870e-43 Identity = 157/520 (30.19%), Postives = 215/520 (41.35%), Query Frame = 2
Query: 278 LARSYGLCAQLECLDYAR-------------------------------HPHWLLADLSREQARNPAAALNTGDCSYDGGSVGHGGGNRPDRRGSAASPASAAARAPVAAKDCATALRMAPQPPPPLQPPQWLEQMREVAHTLAVGHRRGVGGRVLPQFF--LQDGLNGAALLLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEP-AGVRWETAWRVATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPKIREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDXXXXXXXXALSPAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAAAALYVVRHAYMYYGLSKFLVQWDEKLF 1735
LAR+YGL AQL CL+Y P W+LADL+R++ R+ + +G GG W + EV L VG R G ++LP+F+ L LN AL+LR LWL PCPEA+++ DWAR+YPRAGG++ + A+ S L GDF TA+KLGFAQQ+VS Q AG G S + ++ RN V V E RA +GCR++ +LYGGLHM+DL +L + QL A + AG W TAW V T + A +AA + MAS +A A ++ +A G+ E + A+ + PL + A AYV +GAWDW DT+ +A A+ LYV RHAY+YYGL+++LVQW++KLF
Sbjct: 164 LARNYGLSAQLNCLNYCHLCKERTDDGTSXXXXXXXXXXXXXXXXXSNGGPRWVLADLTRDEIRSLQQQAGEKE-------IGQGG---------------------------------------------WQGFIDEVTRALVVG--RQAGDKILPKFYPPLGSTLNRPALVLRALLWLTPCPEAEIMCYDWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQ-----AGGG-----------------NWGQSNAIV-----VKARNQVVVEETERALVEGCRKIMVLYGGLHMQDLTFQLCK----QLDATQDIAG--WRTAWVVPTKARQKA------------------NAATSPVPPRMASA----DAAAGRL----EQAQGQVGMLGDETN-------------ADGMARWGPLGVAALAYVAVGAWDWTDTVEALARELETDGSPLEAFG-------------------SALLVFTLYVARHAYLYYGLARWLVQWEKKLF 538
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: D8LF12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF12_ECTSI) HSP 1 Score: 127 bits (318), Expect = 2.080e-29 Identity = 106/328 (32.32%), Postives = 146/328 (44.51%), Query Frame = 2
Query: 752 DWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPKIREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDXXXXXXXXALSPAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAAAALYVVRHAYMYYGLSKFLVQWDEKLF 1735
DWAR+YPRAGG++ + A+ S L GDF TA+KLGFAQQ+VS Q AG G S + ++ RN V V E RA +GCR++ +LYGGLHM+DL +L + QL A + W TAW V T + A +AA + MAS +A A ++ E + G+ E + A+ + PL + A AYV +GAWDW DT+ +A A+ LYV RHAY+YYGL+++LVQW++KLF
Sbjct: 4 DWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQ-----AGGG-----------------NWGQSDAIV-----VKARNQVVVEETERALAEGCRKIMVLYGGLHMQDLTSQLCK----QLDATQDI-TGWRTAWVVPTRARQKA------------------NAATSPVPPRMASA----DAAAGRL--EQGQGQGQVGMLGDETN-------------ADGMARWGPLGVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFG-------------------SALLVFTLYVARHAYLYYGLARWLVQWEKKLF 243
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: W7TQV4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQV4_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.230e-20 Identity = 105/395 (26.58%), Postives = 152/395 (38.48%), Query Frame = 2
Query: 641 GRVLPQF-FLQDGLNGAAL---LLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLL-------------RGVPGQLP---ALEPAGVRWETAWRV-ATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPKIREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDXXXXXXXXALSPAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAAAA---------LYVVRHAYMYYGLSKFLVQWDEKLF 1735
G+VLP+F FL+ G +AL +LR+ +WL P PE LLLLDWAR YP AGG++ VL +MV + ++GDF T R+L FAQ L SSQ T E +Q R++ V +V +A G + VG+LYGGLH++D++ +L +G GQ E V+W TAW + A R A+ V A+ +P A Y+++G DW+ T +A E AA A LY++RH Y+YYGLS+++V+W+++LF
Sbjct: 289 GKVLPKFLFLRPGQAFSALPFRVLRLCMWLTPAPELQLLLLDWARQYPPAGGLSRVLRSMVGALVQGDFLTLRRLAFAQMLTSSQ--------------------------------TAPAPEVLVQERDSKVVLDVEQALRTGAKDVGVLYGGLHLKDIEAKLRGHLNFTRVEGGMEKGAGGQETLKRGREAQAVQWHTAWTMQAFTRQRQAL----------------------------------VTALCVALP---------------------------------------------ALYLSVGGLDWSATFGGLAKDVSQHVAT------------------------EGTAAEAPTVGWQEVVLYMLRHMYIYYGLSRWVVEWEKQLF 548
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A6U9RMG6_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMG6_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 1.050e-13 Identity = 56/142 (39.44%), Postives = 75/142 (52.82%), Query Frame = 2
Query: 695 LLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRL 1120
L+R LW+ PCPEA LLLLDWA + G +L + ++ L D+ ++KL FAQ LVS Q+ A D TTL + RN A+A V++A DGC+R+ +LYGGLHM+DL RRL
Sbjct: 221 LVRALLWITPCPEAGLLLLDWAW---QGGRPAPILLPLASALLALDYPASQKLVFAQDLVSGQASGFTATD---------------------PETTL------IGKRNEAAIAAVSQAIEDGCKRIAVLYGGLHMKDLSRRL 332
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S0VUI0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUI0_9CRYP) HSP 1 Score: 84.7 bits (208), Expect = 1.710e-13 Identity = 66/174 (37.93%), Postives = 83/174 (47.70%), Query Frame = 2
Query: 698 LRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAV 1219
LR +WL PCPE LLLLDW+ G V+ VL M++S L D +T KL FAQ L+SS ++ P + RN VAV E+ RA +G +LYGGLH DL RRL RG+ E AG RW +AWRVA S+ A+
Sbjct: 341 LRTPMWLVPCPEGALLLLDWS--LSARGRVSEVLGGMLSSLLSFDLQTCGKLSFAQ-LLSSGNMRCEG-----------------------------PQTVIIGERNKVAVRELRRALAEGVGSTALLYGGLHGEDLDRRL-RGM-----GFERAGHRWVSAWRVAVPDSKGAL 476
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S0KSU8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KSU8_MICPS) HSP 1 Score: 79.7 bits (195), Expect = 2.870e-13 Identity = 64/172 (37.21%), Postives = 79/172 (45.93%), Query Frame = 2
Query: 713 WLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAAT-DGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAVPW 1225
WL PCPEA LLLLDW G VL A++ S G+ AR+L FAQ +VS+Q+ A G GA ++ RN VA +A A G RV +LYGGLHM L RRL G+ LEP+ RW WRV + +AV W
Sbjct: 4 WLVPCPEAHLLLLDWVWG---GGRPAPVLGALLDSLAGGNIIAARRLAFAQMIVSAQAKG-AVGGGA-------------------------DVPVLVERRNDVATECLAVALNAPGVSRVTLLYGGLHMPGLTRRLTEGL-----GLEPSTQRWRAVWRVEPPGANNAVRW 141
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: C1FJM4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJM4_MICCC) HSP 1 Score: 80.9 bits (198), Expect = 2.650e-12 Identity = 64/176 (36.36%), Postives = 81/176 (46.02%), Query Frame = 2
Query: 701 RVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAA-TDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAVPW 1225
R+ WL PCPEA LLLLDW G VL A++ S G+ AR+L FAQ +VS+Q+ A G GA ++ RN VA +A+A G RV +LYGGLHM L RRL + LEP+ RW WRV + +AV W
Sbjct: 315 RLVCWLVPCPEAHLLLLDWVWG---GGRPAPVLGALLDSLAGGNIIAARRLAFAQMIVSAQAKG-AVGGGA-------------------------DVPVLVERRNDVATECLAKALDAPGVSRVSLLYGGLHMPGLTRRLTEQL-----GLEPSTQRWRAVWRVEPPGANNAVRW 456
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S1ECB4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ECB4_HEMAN) HSP 1 Score: 79.7 bits (195), Expect = 4.490e-12 Identity = 61/174 (35.06%), Postives = 77/174 (44.25%), Query Frame = 2
Query: 698 LRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAV 1219
LR +WL PCPE LL+LDW+ G ++ VL M+ S L D RTA KL FAQ L S P + RN VA+ E+ RA +G +LYGGLH DL +L RG+ E AG RW +AWR+A S A+
Sbjct: 222 LRTPMWLVPCPEGALLMLDWS--LSERGRLSEVLGGMLESLLSLDLRTAGKLSFAQLLSSGNQRCEG------------------------------PQTVIIGERNRVALRELRRAIGEGVESTALLYGGLHGADLDEKL-RGM-----GFERAGHRWVSAWRIAVPSSDGAL 357
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S1E8V3_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E8V3_HEMAN) HSP 1 Score: 79.7 bits (195), Expect = 6.950e-12 Identity = 61/174 (35.06%), Postives = 77/174 (44.25%), Query Frame = 2
Query: 698 LRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAV 1219
LR +WL PCPE LL+LDW+ G ++ VL M+ S L D RTA KL FAQ L S P + RN VA+ E+ RA +G +LYGGLH DL +L RG+ E AG RW +AWR+A S A+
Sbjct: 352 LRTPMWLVPCPEGALLMLDWS--LSERGRLSEVLGGMLESLLSLDLRTAGKLSFAQLLSSGNQRCEG------------------------------PQTVIIGERNRVALRELRRAIGEGVESTALLYGGLHGADLDEKL-RGM-----GFERAGHRWVSAWRIAVPSSDGAL 487 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5825.1.1 >prot_P-wetherbeei_contig5825.1.1 ID=prot_P-wetherbeei_contig5825.1.1|Name=mRNA_P-wetherbeei_contig5825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=500bp MPVFEHINNRKVSLARSYGLCAQLECLDYARHPHWLLADLSREQARNPAAback to top mRNA from alignment at P-wetherbeei_contig5825:707..3684+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5825.1.1 ID=mRNA_P-wetherbeei_contig5825.1.1|Name=mRNA_P-wetherbeei_contig5825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2978bp|location=Sequence derived from alignment at P-wetherbeei_contig5825:707..3684+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5825:707..3684+ >mRNA_P-wetherbeei_contig5825.1.1 ID=mRNA_P-wetherbeei_contig5825.1.1|Name=mRNA_P-wetherbeei_contig5825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1500bp|location=Sequence derived from alignment at P-wetherbeei_contig5825:707..3684+ (Phaeothamnion wetherbeei SAG_119_79)back to top |